EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000013456 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: C2orf8|MGC2454
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4889 bases
Position: chrKQ557215.1:22133133-22138021
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017862	MTS	PF05175.14	3.8e-07	1	1
ENSXCOP00000017862	UPF0020	PF01170.18	1.2e-27	1	1
ENSXCOP00000017862	Methyltransf_31	PF13847.6	9.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000018086	-	1248	-	ENSXCOP00000017862	415 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013456's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013456	-	91	44.803	ENSG00000138050	THUMPD2	83	44.444	Homo_sapiens
ENSXCOG00000013456	-	99	69.630	ENSAPOG00000001802	-	71	70.480	Acanthochromis_polyacanthus
ENSXCOG00000013456	-	82	46.154	ENSAMEG00000008664	THUMPD2	75	46.154	Ailuropoda_melanoleuca
ENSXCOG00000013456	-	89	50.839	ENSACIG00000011677	THUMPD2	95	50.120	Amphilophus_citrinellus
ENSXCOG00000013456	-	99	68.132	ENSAOCG00000000927	THUMPD2	71	67.766	Amphiprion_ocellaris
ENSXCOG00000013456	-	99	68.132	ENSAPEG00000000981	thumpd2	71	69.597	Amphiprion_percula
ENSXCOG00000013456	-	99	68.166	ENSATEG00000012329	thumpd2	68	68.166	Anabas_testudineus
ENSXCOG00000013456	-	85	48.399	ENSAPLG00000008775	THUMPD2	75	47.500	Anas_platyrhynchos
ENSXCOG00000013456	-	65	45.936	ENSACAG00000000538	THUMPD2	58	45.745	Anolis_carolinensis
ENSXCOG00000013456	-	96	46.953	ENSANAG00000034298	THUMPD2	77	45.324	Aotus_nancymaae
ENSXCOG00000013456	-	99	66.450	ENSACLG00000025840	thumpd2	98	61.593	Astatotilapia_calliptera
ENSXCOG00000013456	-	96	41.412	ENSAMXG00000011080	thumpd2	97	41.412	Astyanax_mexicanus
ENSXCOG00000013456	-	88	44.444	ENSBTAG00000004722	THUMPD2	74	43.728	Bos_taurus
ENSXCOG00000013456	-	94	46.786	ENSCJAG00000014891	THUMPD2	78	46.786	Callithrix_jacchus
ENSXCOG00000013456	-	88	46.595	ENSCAFG00000006471	THUMPD2	74	46.237	Canis_familiaris
ENSXCOG00000013456	-	93	42.154	ENSCAFG00020021695	THUMPD2	75	46.237	Canis_lupus_dingo
ENSXCOG00000013456	-	88	45.907	ENSCHIG00000013921	THUMPD2	74	45.196	Capra_hircus
ENSXCOG00000013456	-	65	45.936	ENSTSYG00000010555	THUMPD2	66	45.035	Carlito_syrichta
ENSXCOG00000013456	-	97	36.122	ENSCPOG00000003368	THUMPD2	96	36.122	Cavia_porcellus
ENSXCOG00000013456	-	91	46.154	ENSCCAG00000034405	THUMPD2	76	45.161	Cebus_capucinus
ENSXCOG00000013456	-	94	45.965	ENSCATG00000012396	THUMPD2	79	44.964	Cercocebus_atys
ENSXCOG00000013456	-	89	45.907	ENSCLAG00000003029	THUMPD2	56	56.383	Chinchilla_lanigera
ENSXCOG00000013456	-	65	45.614	ENSCSAG00000012431	THUMPD2	66	44.604	Chlorocebus_sabaeus
ENSXCOG00000013456	-	67	39.080	ENSCHOG00000000360	THUMPD2	75	39.080	Choloepus_hoffmanni
ENSXCOG00000013456	-	89	47.603	ENSCPBG00000018272	THUMPD2	72	47.260	Chrysemys_picta_bellii
ENSXCOG00000013456	-	91	45.105	ENSCANG00000032596	THUMPD2	76	45.105	Colobus_angolensis_palliatus
ENSXCOG00000013456	-	88	45.714	ENSCGRG00001009939	Thumpd2	53	53.968	Cricetulus_griseus_chok1gshd
ENSXCOG00000013456	-	80	78.755	ENSCVAG00000007942	THUMPD2	75	77.289	Cyprinodon_variegatus
ENSXCOG00000013456	-	96	42.793	ENSDARG00000093070	thumpd2	98	42.601	Danio_rerio
ENSXCOG00000013456	-	89	46.263	ENSDNOG00000019834	THUMPD2	74	46.263	Dasypus_novemcinctus
ENSXCOG00000013456	-	88	37.276	ENSETEG00000001300	THUMPD2	80	36.918	Echinops_telfairi
ENSXCOG00000013456	-	64	40.659	ENSEBUG00000010906	THUMPD2	81	40.659	Eptatretus_burgeri
ENSXCOG00000013456	-	93	44.643	ENSEASG00005005106	THUMPD2	93	35.282	Equus_asinus_asinus
ENSXCOG00000013456	-	93	44.086	ENSECAG00000010799	THUMPD2	76	43.750	Equus_caballus
ENSXCOG00000013456	-	71	40.323	ENSEEUG00000000105	THUMPD2	85	40.323	Erinaceus_europaeus
ENSXCOG00000013456	-	93	55.515	ENSELUG00000003735	thumpd2	73	55.515	Esox_lucius
ENSXCOG00000013456	-	90	46.403	ENSFCAG00000006809	THUMPD2	75	46.043	Felis_catus
ENSXCOG00000013456	-	65	51.449	ENSFALG00000008655	THUMPD2	51	51.071	Ficedula_albicollis
ENSXCOG00000013456	-	99	82.847	ENSFHEG00000011402	thumpd2	79	82.847	Fundulus_heteroclitus
ENSXCOG00000013456	-	65	45.985	ENSGALG00000009119	THUMPD2	65	45.985	Gallus_gallus
ENSXCOG00000013456	-	99	94.245	ENSGAFG00000012683	thumpd2	80	94.245	Gambusia_affinis
ENSXCOG00000013456	-	65	42.199	ENSGAGG00000001325	THUMPD2	67	41.844	Gopherus_agassizii
ENSXCOG00000013456	-	94	45.105	ENSGGOG00000001608	THUMPD2	83	44.086	Gorilla_gorilla
ENSXCOG00000013456	-	65	69.474	ENSHBUG00000011780	-	55	70.175	Haplochromis_burtoni
ENSXCOG00000013456	-	88	45.965	ENSHGLG00000019145	THUMPD2	74	45.614	Heterocephalus_glaber_female
ENSXCOG00000013456	-	97	43.943	ENSIPUG00000015283	thumpd2	97	42.925	Ictalurus_punctatus
ENSXCOG00000013456	-	89	45.878	ENSSTOG00000027472	THUMPD2	74	45.878	Ictidomys_tridecemlineatus
ENSXCOG00000013456	-	65	44.286	ENSJJAG00000020374	Thumpd2	58	43.885	Jaculus_jaculus
ENSXCOG00000013456	-	99	67.500	ENSLBEG00000007585	THUMPD2	72	67.500	Labrus_bergylta
ENSXCOG00000013456	-	93	54.317	ENSLOCG00000015747	THUMPD2	97	47.382	Lepisosteus_oculatus
ENSXCOG00000013456	-	94	45.965	ENSMFAG00000031464	THUMPD2	79	44.964	Macaca_fascicularis
ENSXCOG00000013456	-	91	45.965	ENSMMUG00000011841	THUMPD2	79	44.964	Macaca_mulatta
ENSXCOG00000013456	-	94	45.965	ENSMNEG00000037438	THUMPD2	79	44.964	Macaca_nemestrina
ENSXCOG00000013456	-	65	45.965	ENSMLEG00000031490	THUMPD2	77	44.964	Mandrillus_leucophaeus
ENSXCOG00000013456	-	92	60.808	ENSMAMG00000022090	thumpd2	95	60.808	Mastacembelus_armatus
ENSXCOG00000013456	-	99	69.825	ENSMZEG00005027354	-	70	70.526	Maylandia_zebra
ENSXCOG00000013456	-	65	45.818	ENSMGAG00000007605	THUMPD2	57	45.818	Meleagris_gallopavo
ENSXCOG00000013456	-	94	42.553	ENSMAUG00000012866	Thumpd2	74	42.553	Mesocricetus_auratus
ENSXCOG00000013456	-	88	47.163	ENSMICG00000008042	THUMPD2	73	45.517	Microcebus_murinus
ENSXCOG00000013456	-	65	46.263	ENSMOCG00000018094	Thumpd2	51	45.520	Microtus_ochrogaster
ENSXCOG00000013456	-	99	58.451	ENSMMOG00000007356	thumpd2	99	58.451	Mola_mola
ENSXCOG00000013456	-	65	46.996	ENSMODG00000009129	THUMPD2	59	45.936	Monodelphis_domestica
ENSXCOG00000013456	-	99	56.047	ENSMALG00000020471	thumpd2	99	56.279	Monopterus_albus
ENSXCOG00000013456	-	90	43.403	MGP_CAROLIEiJ_G0021912	Thumpd2	71	43.403	Mus_caroli
ENSXCOG00000013456	-	90	43.793	ENSMUSG00000024246	Thumpd2	71	43.793	Mus_musculus
ENSXCOG00000013456	-	90	43.793	MGP_PahariEiJ_G0020902	Thumpd2	71	43.793	Mus_pahari
ENSXCOG00000013456	-	90	44.138	MGP_SPRETEiJ_G0022828	Thumpd2	71	44.138	Mus_spretus
ENSXCOG00000013456	-	91	46.619	ENSMPUG00000010563	THUMPD2	75	46.619	Mustela_putorius_furo
ENSXCOG00000013456	-	93	35.865	ENSMLUG00000009688	THUMPD2	77	45.520	Myotis_lucifugus
ENSXCOG00000013456	-	94	45.324	ENSNGAG00000016396	Thumpd2	77	44.604	Nannospalax_galili
ENSXCOG00000013456	-	94	44.086	ENSNLEG00000016562	THUMPD2	79	43.728	Nomascus_leucogenys
ENSXCOG00000013456	-	84	43.321	ENSMEUG00000014815	THUMPD2	76	43.416	Notamacropus_eugenii
ENSXCOG00000013456	-	65	39.068	ENSOPRG00000013478	THUMPD2	59	38.267	Ochotona_princeps
ENSXCOG00000013456	-	83	77.619	ENSONIG00000001165	thumpd2	78	77.619	Oreochromis_niloticus
ENSXCOG00000013456	-	59	57.639	ENSOANG00000004028	-	66	57.639	Ornithorhynchus_anatinus
ENSXCOG00000013456	-	88	46.237	ENSOCUG00000003257	THUMPD2	68	53.714	Oryctolagus_cuniculus
ENSXCOG00000013456	-	98	67.384	ENSORLG00000002138	thumpd2	83	67.384	Oryzias_latipes
ENSXCOG00000013456	-	82	67.742	ENSORLG00020018792	thumpd2	81	67.742	Oryzias_latipes_hni
ENSXCOG00000013456	-	99	68.459	ENSORLG00015005237	thumpd2	91	63.175	Oryzias_latipes_hsok
ENSXCOG00000013456	-	99	55.381	ENSOMEG00000023563	thumpd2	99	54.422	Oryzias_melastigma
ENSXCOG00000013456	-	65	45.556	ENSOGAG00000010890	THUMPD2	58	45.556	Otolemur_garnettii
ENSXCOG00000013456	-	97	38.957	ENSOARG00000007841	THUMPD2	83	38.650	Ovis_aries
ENSXCOG00000013456	-	97	45.105	ENSPPAG00000033850	THUMPD2	82	45.105	Pan_paniscus
ENSXCOG00000013456	-	90	46.763	ENSPPRG00000003874	THUMPD2	75	45.487	Panthera_pardus
ENSXCOG00000013456	-	84	46.763	ENSPTIG00000004118	THUMPD2	74	45.487	Panthera_tigris_altaica
ENSXCOG00000013456	-	94	45.105	ENSPTRG00000011860	THUMPD2	83	45.105	Pan_troglodytes
ENSXCOG00000013456	-	94	45.614	ENSPANG00000004807	THUMPD2	79	44.604	Papio_anubis
ENSXCOG00000013456	-	99	44.086	ENSPKIG00000022207	THUMPD2	92	43.226	Paramormyrops_kingsleyae
ENSXCOG00000013456	-	65	46.619	ENSPSIG00000003159	THUMPD2	60	46.263	Pelodiscus_sinensis
ENSXCOG00000013456	-	89	42.456	ENSPEMG00000009015	Thumpd2	70	42.456	Peromyscus_maniculatus_bairdii
ENSXCOG00000013456	-	92	44.141	ENSPCIG00000022621	THUMPD2	77	43.359	Phascolarctos_cinereus
ENSXCOG00000013456	-	100	89.209	ENSPFOG00000006461	thumpd2	99	69.940	Poecilia_formosa
ENSXCOG00000013456	-	100	75.283	ENSPLAG00000010700	THUMPD2	100	75.283	Poecilia_latipinna
ENSXCOG00000013456	-	100	80.499	ENSPMEG00000009573	-	100	80.499	Poecilia_mexicana
ENSXCOG00000013456	-	100	78.372	ENSPREG00000001603	THUMPD2	100	78.372	Poecilia_reticulata
ENSXCOG00000013456	-	93	45.105	ENSPPYG00000012470	THUMPD2	82	45.105	Pongo_abelii
ENSXCOG00000013456	-	60	43.462	ENSPCAG00000007326	THUMPD2	54	43.077	Procavia_capensis
ENSXCOG00000013456	-	65	40.860	ENSPCOG00000028456	-	51	39.373	Propithecus_coquereli
ENSXCOG00000013456	-	88	47.670	ENSPCOG00000000396	-	73	45.993	Propithecus_coquereli
ENSXCOG00000013456	-	85	43.929	ENSPVAG00000008101	THUMPD2	78	43.816	Pteropus_vampyrus
ENSXCOG00000013456	-	99	54.487	ENSPNYG00000009804	THUMPD2	98	55.748	Pundamilia_nyererei
ENSXCOG00000013456	-	98	44.851	ENSPNAG00000023224	thumpd2	98	44.851	Pygocentrus_nattereri
ENSXCOG00000013456	-	90	42.708	ENSRNOG00000008291	Thumpd2	62	51.099	Rattus_norvegicus
ENSXCOG00000013456	-	99	37.234	ENSRBIG00000034978	THUMPD2	99	36.247	Rhinopithecus_bieti
ENSXCOG00000013456	-	87	45.804	ENSRROG00000031707	THUMPD2	77	45.804	Rhinopithecus_roxellana
ENSXCOG00000013456	-	95	46.786	ENSSBOG00000015419	THUMPD2	79	46.786	Saimiri_boliviensis_boliviensis
ENSXCOG00000013456	-	84	45.775	ENSSHAG00000010785	THUMPD2	75	45.775	Sarcophilus_harrisii
ENSXCOG00000013456	-	78	54.054	ENSSFOG00015006959	THUMPD2	94	54.054	Scleropages_formosus
ENSXCOG00000013456	-	99	68.750	ENSSDUG00000019898	THUMPD2	76	68.750	Seriola_dumerili
ENSXCOG00000013456	-	99	68.056	ENSSLDG00000016788	-	76	68.056	Seriola_lalandi_dorsalis
ENSXCOG00000013456	-	74	42.941	ENSSPUG00000006316	THUMPD2	77	42.647	Sphenodon_punctatus
ENSXCOG00000013456	-	88	45.878	ENSSSCG00000008470	THUMPD2	96	30.649	Sus_scrofa
ENSXCOG00000013456	-	74	40.157	ENSTGUG00000012782	THUMPD2	98	40.000	Taeniopygia_guttata
ENSXCOG00000013456	-	99	60.000	ENSTRUG00000022712	THUMPD2	84	60.000	Takifugu_rubripes
ENSXCOG00000013456	-	65	37.011	ENSTBEG00000008269	-	58	35.357	Tupaia_belangeri
ENSXCOG00000013456	-	85	46.341	ENSTTRG00000005603	THUMPD2	75	46.341	Tursiops_truncatus
ENSXCOG00000013456	-	88	46.263	ENSUAMG00000011048	THUMPD2	72	46.786	Ursus_americanus
ENSXCOG00000013456	-	88	45.230	ENSUMAG00000013316	THUMPD2	60	57.143	Ursus_maritimus
ENSXCOG00000013456	-	69	58.333	ENSVPAG00000007570	THUMPD2	62	58.333	Vicugna_pacos
ENSXCOG00000013456	-	85	45.329	ENSVVUG00000018628	THUMPD2	75	45.329	Vulpes_vulpes
ENSXCOG00000013456	-	87	44.151	ENSXETG00000018494	thumpd2	64	53.476	Xenopus_tropicalis
ENSXCOG00000013456	-	100	96.763	ENSXMAG00000017249	thumpd2	80	96.763	Xiphophorus_maculatus