EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000013485 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2a
Alias: zgc:56307
Full Name: ribonuclease H2%2C subunit A
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2895 bases
Position: chrKQ557220.1:9791336-9794230
Accession: ZDB-GENE-040426-976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017902	RNase_HII	PF01351.18	9.9e-52	1	1
ENSXCOP00000017903	RNase_HII	PF01351.18	4.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000018126	-	918	-	ENSXCOP00000017902	305 (aa)	-	-
ENSXCOT00000018127	-	216	-	ENSXCOP00000017903	71 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013485's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013485	rnaseh2a	100	66.197	ENSG00000104889	RNASEH2A	100	66.197	Homo_sapiens
ENSXCOG00000013485	rnaseh2a	100	87.013	ENSAPOG00000004101	rnaseh2a	100	87.013	Acanthochromis_polyacanthus
ENSXCOG00000013485	rnaseh2a	99	61.429	ENSAMEG00000012323	RNASEH2A	100	59.344	Ailuropoda_melanoleuca
ENSXCOG00000013485	rnaseh2a	99	77.143	ENSACIG00000002658	rnaseh2a	100	87.843	Amphilophus_citrinellus
ENSXCOG00000013485	rnaseh2a	100	86.688	ENSAOCG00000009217	rnaseh2a	100	86.688	Amphiprion_ocellaris
ENSXCOG00000013485	rnaseh2a	100	86.688	ENSAPEG00000022937	rnaseh2a	100	86.688	Amphiprion_percula
ENSXCOG00000013485	rnaseh2a	100	85.761	ENSATEG00000000908	rnaseh2a	100	85.761	Anabas_testudineus
ENSXCOG00000013485	rnaseh2a	100	67.869	ENSACAG00000003338	RNASEH2A	100	67.869	Anolis_carolinensis
ENSXCOG00000013485	rnaseh2a	100	46.965	ENSANAG00000037932	RNASEH2A	100	46.965	Aotus_nancymaae
ENSXCOG00000013485	rnaseh2a	100	85.390	ENSACLG00000009169	rnaseh2a	100	85.390	Astatotilapia_calliptera
ENSXCOG00000013485	rnaseh2a	100	71.336	ENSAMXG00000000436	rnaseh2a	100	71.336	Astyanax_mexicanus
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSBTAG00000009661	RNASEH2A	100	61.639	Bos_taurus
ENSXCOG00000013485	rnaseh2a	90	47.842	WBGene00004383	rnh-2	92	47.842	Caenorhabditis_elegans
ENSXCOG00000013485	rnaseh2a	100	60.912	ENSCJAG00000004873	RNASEH2A	100	60.912	Callithrix_jacchus
ENSXCOG00000013485	rnaseh2a	99	61.429	ENSCAFG00000017159	RNASEH2A	100	59.283	Canis_familiaris
ENSXCOG00000013485	rnaseh2a	100	63.380	ENSCAFG00020005190	RNASEH2A	60	59.283	Canis_lupus_dingo
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSCHIG00000014460	RNASEH2A	100	61.311	Capra_hircus
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSTSYG00000025418	RNASEH2A	100	61.311	Carlito_syrichta
ENSXCOG00000013485	rnaseh2a	64	54.592	ENSCAPG00000003411	RNASEH2A	100	54.592	Cavia_aperea
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSCPOG00000038877	RNASEH2A	100	58.361	Cavia_porcellus
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSCCAG00000030453	RNASEH2A	100	60.984	Cebus_capucinus
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSCATG00000029609	RNASEH2A	100	60.984	Cercocebus_atys
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSCLAG00000014930	RNASEH2A	100	60.984	Chinchilla_lanigera
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSCSAG00000006567	RNASEH2A	100	60.984	Chlorocebus_sabaeus
ENSXCOG00000013485	rnaseh2a	100	67.541	ENSCPBG00000023909	RNASEH2A	100	67.541	Chrysemys_picta_bellii
ENSXCOG00000013485	rnaseh2a	100	52.131	ENSCING00000006190	-	100	52.131	Ciona_intestinalis
ENSXCOG00000013485	rnaseh2a	100	51.148	ENSCSAVG00000010904	-	100	51.148	Ciona_savignyi
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSCANG00000027433	RNASEH2A	100	61.639	Colobus_angolensis_palliatus
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSCGRG00001005021	Rnaseh2a	100	60.984	Cricetulus_griseus_chok1gshd
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSCGRG00000016602	Rnaseh2a	100	60.984	Cricetulus_griseus_crigri
ENSXCOG00000013485	rnaseh2a	99	84.437	ENSCSEG00000009842	rnaseh2a	99	84.437	Cynoglossus_semilaevis
ENSXCOG00000013485	rnaseh2a	99	79.868	ENSCVAG00000021203	rnaseh2a	99	79.868	Cyprinodon_variegatus
ENSXCOG00000013485	rnaseh2a	100	82.085	ENSDARG00000018891	rnaseh2a	100	82.085	Danio_rerio
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSDNOG00000036532	RNASEH2A	100	57.854	Dasypus_novemcinctus
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSDORG00000009008	Rnaseh2a	100	60.984	Dipodomys_ordii
ENSXCOG00000013485	rnaseh2a	96	48.993	FBgn0031252	CG13690	85	48.993	Drosophila_melanogaster
ENSXCOG00000013485	rnaseh2a	99	65.714	ENSETEG00000001956	-	100	56.338	Echinops_telfairi
ENSXCOG00000013485	rnaseh2a	98	55.333	ENSEBUG00000003380	rnaseh2a	92	55.333	Eptatretus_burgeri
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSEASG00005004118	RNASEH2A	95	64.885	Equus_asinus_asinus
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSECAG00000007013	RNASEH2A	100	59.344	Equus_caballus
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSEEUG00000008222	RNASEH2A	100	58.033	Erinaceus_europaeus
ENSXCOG00000013485	rnaseh2a	99	81.429	ENSELUG00000023079	rnaseh2a	96	76.518	Esox_lucius
ENSXCOG00000013485	rnaseh2a	99	61.429	ENSFCAG00000000474	RNASEH2A	100	59.283	Felis_catus
ENSXCOG00000013485	rnaseh2a	100	60.656	ENSFDAG00000003595	RNASEH2A	96	65.339	Fukomys_damarensis
ENSXCOG00000013485	rnaseh2a	100	94.426	ENSFHEG00000007682	rnaseh2a	100	94.426	Fundulus_heteroclitus
ENSXCOG00000013485	rnaseh2a	99	80.000	ENSGMOG00000005650	rnaseh2a	100	77.994	Gadus_morhua
ENSXCOG00000013485	rnaseh2a	100	60.784	ENSGALG00000052002	RNASEH2A	73	60.784	Gallus_gallus
ENSXCOG00000013485	rnaseh2a	100	96.721	ENSGAFG00000009624	rnaseh2a	100	96.721	Gambusia_affinis
ENSXCOG00000013485	rnaseh2a	100	85.621	ENSGACG00000016019	rnaseh2a	100	85.621	Gasterosteus_aculeatus
ENSXCOG00000013485	rnaseh2a	100	66.885	ENSGAGG00000013859	RNASEH2A	100	66.885	Gopherus_agassizii
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSGGOG00000005846	RNASEH2A	100	60.984	Gorilla_gorilla
ENSXCOG00000013485	rnaseh2a	95	86.851	ENSHBUG00000005267	rnaseh2a	99	86.851	Haplochromis_burtoni
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSHGLG00000018801	RNASEH2A	100	60.328	Heterocephalus_glaber_female
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSHGLG00100015773	RNASEH2A	100	60.656	Heterocephalus_glaber_male
ENSXCOG00000013485	rnaseh2a	100	80.984	ENSHCOG00000016593	rnaseh2a	100	80.984	Hippocampus_comes
ENSXCOG00000013485	rnaseh2a	100	81.759	ENSIPUG00000024299	rnaseh2a	100	81.759	Ictalurus_punctatus
ENSXCOG00000013485	rnaseh2a	99	61.429	ENSSTOG00000006224	RNASEH2A	99	66.667	Ictidomys_tridecemlineatus
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSJJAG00000017547	Rnaseh2a	100	61.765	Jaculus_jaculus
ENSXCOG00000013485	rnaseh2a	100	86.885	ENSKMAG00000019829	rnaseh2a	100	86.885	Kryptolebias_marmoratus
ENSXCOG00000013485	rnaseh2a	100	83.117	ENSLBEG00000020494	rnaseh2a	100	83.117	Labrus_bergylta
ENSXCOG00000013485	rnaseh2a	99	71.429	ENSLACG00000007789	RNASEH2A	99	68.235	Latimeria_chalumnae
ENSXCOG00000013485	rnaseh2a	100	77.049	ENSLOCG00000007890	rnaseh2a	99	77.049	Lepisosteus_oculatus
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSLAFG00000015571	RNASEH2A	100	60.000	Loxodonta_africana
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSMFAG00000002011	RNASEH2A	100	60.984	Macaca_fascicularis
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSMMUG00000005690	RNASEH2A	100	60.984	Macaca_mulatta
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSMNEG00000033054	RNASEH2A	100	61.238	Macaca_nemestrina
ENSXCOG00000013485	rnaseh2a	100	60.656	ENSMLEG00000043654	RNASEH2A	100	60.656	Mandrillus_leucophaeus
ENSXCOG00000013485	rnaseh2a	100	84.740	ENSMAMG00000003062	rnaseh2a	98	88.256	Mastacembelus_armatus
ENSXCOG00000013485	rnaseh2a	100	84.740	ENSMZEG00005023857	rnaseh2a	100	84.740	Maylandia_zebra
ENSXCOG00000013485	rnaseh2a	99	61.429	ENSMAUG00000008286	-	100	65.217	Mesocricetus_auratus
ENSXCOG00000013485	rnaseh2a	55	58.580	ENSMAUG00000021740	-	100	58.580	Mesocricetus_auratus
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSMICG00000016430	RNASEH2A	100	59.344	Microcebus_murinus
ENSXCOG00000013485	rnaseh2a	100	61.564	ENSMOCG00000017408	Rnaseh2a	100	61.564	Microtus_ochrogaster
ENSXCOG00000013485	rnaseh2a	99	74.286	ENSMMOG00000008447	rnaseh2a	100	83.922	Mola_mola
ENSXCOG00000013485	rnaseh2a	99	71.429	ENSMODG00000006997	RNASEH2A	100	66.558	Monodelphis_domestica
ENSXCOG00000013485	rnaseh2a	100	84.740	ENSMALG00000021607	rnaseh2a	100	84.740	Monopterus_albus
ENSXCOG00000013485	rnaseh2a	99	62.857	MGP_CAROLIEiJ_G0031319	-	100	68.519	Mus_caroli
ENSXCOG00000013485	rnaseh2a	100	61.889	ENSMUSG00000052926	Rnaseh2a	100	68.519	Mus_musculus
ENSXCOG00000013485	rnaseh2a	99	62.857	MGP_PahariEiJ_G0022924	Rnaseh2a	100	68.519	Mus_pahari
ENSXCOG00000013485	rnaseh2a	100	62.215	MGP_SPRETEiJ_G0032438	Rnaseh2a	100	68.519	Mus_spretus
ENSXCOG00000013485	rnaseh2a	100	60.328	ENSMPUG00000004586	RNASEH2A	100	60.328	Mustela_putorius_furo
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSMLUG00000012723	RNASEH2A	100	60.328	Myotis_lucifugus
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSNGAG00000017988	Rnaseh2a	100	59.016	Nannospalax_galili
ENSXCOG00000013485	rnaseh2a	100	85.714	ENSNBRG00000018731	rnaseh2a	100	85.714	Neolamprologus_brichardi
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSNLEG00000012806	RNASEH2A	100	61.311	Nomascus_leucogenys
ENSXCOG00000013485	rnaseh2a	99	71.429	ENSMEUG00000006001	RNASEH2A	100	73.239	Notamacropus_eugenii
ENSXCOG00000013485	rnaseh2a	100	50.820	ENSOPRG00000004811	RNASEH2A	100	50.820	Ochotona_princeps
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSODEG00000009772	RNASEH2A	100	60.656	Octodon_degus
ENSXCOG00000013485	rnaseh2a	100	85.714	ENSONIG00000018033	rnaseh2a	99	85.714	Oreochromis_niloticus
ENSXCOG00000013485	rnaseh2a	100	61.311	ENSOANG00000009079	RNASEH2A	100	61.311	Ornithorhynchus_anatinus
ENSXCOG00000013485	rnaseh2a	100	83.987	ENSORLG00000004042	rnaseh2a	100	83.987	Oryzias_latipes
ENSXCOG00000013485	rnaseh2a	100	83.987	ENSORLG00020009483	rnaseh2a	100	83.987	Oryzias_latipes_hni
ENSXCOG00000013485	rnaseh2a	100	83.987	ENSORLG00015007548	rnaseh2a	100	83.987	Oryzias_latipes_hsok
ENSXCOG00000013485	rnaseh2a	99	85.714	ENSOMEG00000016454	rnaseh2a	100	83.660	Oryzias_melastigma
ENSXCOG00000013485	rnaseh2a	99	61.429	ENSOGAG00000012214	RNASEH2A	100	58.689	Otolemur_garnettii
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSOARG00000010721	RNASEH2A	100	61.311	Ovis_aries
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSPPAG00000028092	RNASEH2A	100	60.984	Pan_paniscus
ENSXCOG00000013485	rnaseh2a	99	61.429	ENSPPRG00000010585	RNASEH2A	100	59.283	Panthera_pardus
ENSXCOG00000013485	rnaseh2a	99	61.429	ENSPTIG00000013366	RNASEH2A	100	59.609	Panthera_tigris_altaica
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSPTRG00000010542	RNASEH2A	100	60.656	Pan_troglodytes
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSPANG00000034495	RNASEH2A	100	60.984	Papio_anubis
ENSXCOG00000013485	rnaseh2a	100	78.361	ENSPKIG00000009756	rnaseh2a	100	78.361	Paramormyrops_kingsleyae
ENSXCOG00000013485	rnaseh2a	66	68.500	ENSPSIG00000012039	RNASEH2A	100	68.500	Pelodiscus_sinensis
ENSXCOG00000013485	rnaseh2a	99	72.857	ENSPMGG00000023392	rnaseh2a	100	83.529	Periophthalmus_magnuspinnatus
ENSXCOG00000013485	rnaseh2a	100	61.364	ENSPEMG00000018009	Rnaseh2a	100	61.364	Peromyscus_maniculatus_bairdii
ENSXCOG00000013485	rnaseh2a	99	65.714	ENSPMAG00000009060	rnaseh2a	98	63.158	Petromyzon_marinus
ENSXCOG00000013485	rnaseh2a	99	72.857	ENSPCIG00000014119	RNASEH2A	100	66.558	Phascolarctos_cinereus
ENSXCOG00000013485	rnaseh2a	100	97.049	ENSPFOG00000012627	rnaseh2a	100	93.506	Poecilia_formosa
ENSXCOG00000013485	rnaseh2a	99	94.286	ENSPLAG00000015901	rnaseh2a	100	96.863	Poecilia_latipinna
ENSXCOG00000013485	rnaseh2a	68	92.233	ENSPLAG00000018723	-	90	92.233	Poecilia_latipinna
ENSXCOG00000013485	rnaseh2a	99	94.286	ENSPMEG00000000647	rnaseh2a	100	96.863	Poecilia_mexicana
ENSXCOG00000013485	rnaseh2a	68	92.233	ENSPMEG00000009032	-	93	92.233	Poecilia_mexicana
ENSXCOG00000013485	rnaseh2a	100	93.443	ENSPREG00000015015	rnaseh2a	100	93.443	Poecilia_reticulata
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSPPYG00000009608	RNASEH2A	100	60.458	Pongo_abelii
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSPCAG00000015319	RNASEH2A	100	60.656	Procavia_capensis
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSPCOG00000003686	RNASEH2A	100	59.016	Propithecus_coquereli
ENSXCOG00000013485	rnaseh2a	99	65.714	ENSPVAG00000014703	RNASEH2A	98	48.829	Pteropus_vampyrus
ENSXCOG00000013485	rnaseh2a	99	80.000	ENSPNYG00000023986	rnaseh2a	100	78.387	Pundamilia_nyererei
ENSXCOG00000013485	rnaseh2a	100	81.699	ENSPNAG00000021017	rnaseh2a	100	81.699	Pygocentrus_nattereri
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSRNOG00000003504	Rnaseh2a	100	60.912	Rattus_norvegicus
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSRBIG00000023554	RNASEH2A	100	61.889	Rhinopithecus_bieti
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSRROG00000043799	RNASEH2A	100	61.889	Rhinopithecus_roxellana
ENSXCOG00000013485	rnaseh2a	90	39.510	YNL072W	RNH201	88	39.510	Saccharomyces_cerevisiae
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSSBOG00000033164	RNASEH2A	100	61.889	Saimiri_boliviensis_boliviensis
ENSXCOG00000013485	rnaseh2a	99	65.714	ENSSHAG00000015552	RNASEH2A	100	64.194	Sarcophilus_harrisii
ENSXCOG00000013485	rnaseh2a	99	81.429	ENSSFOG00015009692	rnaseh2a	100	78.361	Scleropages_formosus
ENSXCOG00000013485	rnaseh2a	100	83.766	ENSSMAG00000013986	rnaseh2a	99	85.517	Scophthalmus_maximus
ENSXCOG00000013485	rnaseh2a	96	85.959	ENSSDUG00000005280	rnaseh2a	99	86.552	Seriola_dumerili
ENSXCOG00000013485	rnaseh2a	100	85.390	ENSSLDG00000023766	rnaseh2a	100	85.390	Seriola_lalandi_dorsalis
ENSXCOG00000013485	rnaseh2a	100	85.390	ENSSPAG00000012769	rnaseh2a	100	85.390	Stegastes_partitus
ENSXCOG00000013485	rnaseh2a	99	62.857	ENSSSCG00000013737	RNASEH2A	100	59.871	Sus_scrofa
ENSXCOG00000013485	rnaseh2a	99	82.857	ENSTRUG00000000049	rnaseh2a	100	80.000	Takifugu_rubripes
ENSXCOG00000013485	rnaseh2a	100	80.519	ENSTNIG00000004533	rnaseh2a	99	80.519	Tetraodon_nigroviridis
ENSXCOG00000013485	rnaseh2a	99	64.286	ENSTTRG00000003592	RNASEH2A	100	67.136	Tursiops_truncatus
ENSXCOG00000013485	rnaseh2a	100	63.380	ENSUAMG00000019593	RNASEH2A	100	63.380	Ursus_americanus
ENSXCOG00000013485	rnaseh2a	99	61.429	ENSUMAG00000006254	-	73	65.948	Ursus_maritimus
ENSXCOG00000013485	rnaseh2a	99	69.205	ENSXETG00000004762	rnaseh2a	98	69.205	Xenopus_tropicalis
ENSXCOG00000013485	rnaseh2a	100	99.344	ENSXMAG00000006953	rnaseh2a	100	99.344	Xiphophorus_maculatus