EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000013543 (Gene tree)
Gene ID: -
Gene Symbol: rpl29
Alias: zgc:92868
Full Name: ribosomal protein L29
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2467 bases
Position: chrKQ557213.1:17916192-17918658
Accession: ZDB-GENE-040801-167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017985	Ribosomal_L29e	PF01779.17	3.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000018209	-	195	-	ENSXCOP00000017985	64 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013543	rpl29	86	98.182	ENSG00000162244	RPL29	97	91.667	Homo_sapiens
ENSXCOG00000013543	rpl29	84	88.889	ENSAPOG00000002586	rpl29	100	84.375	Acanthochromis_polyacanthus
ENSXCOG00000013543	rpl29	84	96.296	ENSACIG00000018340	rpl29	100	92.188	Amphilophus_citrinellus
ENSXCOG00000013543	rpl29	84	92.593	ENSAOCG00000016652	rpl29	100	87.500	Amphiprion_ocellaris
ENSXCOG00000013543	rpl29	84	92.593	ENSAPEG00000005754	rpl29	100	87.500	Amphiprion_percula
ENSXCOG00000013543	rpl29	91	96.552	ENSACAG00000006888	RPL29	89	96.552	Anolis_carolinensis
ENSXCOG00000013543	rpl29	86	98.182	ENSANAG00000024147	-	77	80.435	Aotus_nancymaae
ENSXCOG00000013543	rpl29	100	93.750	ENSACLG00000017820	rpl29	100	93.750	Astatotilapia_calliptera
ENSXCOG00000013543	rpl29	100	87.500	ENSAMXG00000038794	rpl29	100	87.500	Astyanax_mexicanus
ENSXCOG00000013543	rpl29	84	59.259	WBGene00004443	rpl-29	87	59.259	Caenorhabditis_elegans
ENSXCOG00000013543	rpl29	86	98.182	ENSCJAG00000042339	-	77	80.435	Callithrix_jacchus
ENSXCOG00000013543	rpl29	86	98.182	ENSCCAG00000027980	-	77	80.435	Cebus_capucinus
ENSXCOG00000013543	rpl29	72	87.234	ENSCSAG00000017871	-	50	89.286	Chlorocebus_sabaeus
ENSXCOG00000013543	rpl29	81	78.846	ENSCING00000018496	-	90	78.846	Ciona_intestinalis
ENSXCOG00000013543	rpl29	81	78.846	ENSCSAVG00000005231	-	88	78.846	Ciona_savignyi
ENSXCOG00000013543	rpl29	86	98.182	ENSCGRG00001016452	-	81	98.182	Cricetulus_griseus_chok1gshd
ENSXCOG00000013543	rpl29	78	94.000	ENSCSEG00000010267	rpl29	92	91.803	Cynoglossus_semilaevis
ENSXCOG00000013543	rpl29	78	98.000	ENSCVAG00000023098	rpl29	100	93.750	Cyprinodon_variegatus
ENSXCOG00000013543	rpl29	88	94.643	ENSDARG00000077717	rpl29	88	94.643	Danio_rerio
ENSXCOG00000013543	rpl29	78	64.000	FBgn0016726	RpL29	66	64.000	Drosophila_melanogaster
ENSXCOG00000013543	rpl29	67	88.372	ENSEASG00005005507	-	66	88.372	Equus_asinus_asinus
ENSXCOG00000013543	rpl29	95	81.967	ENSELUG00000015592	RL29	87	81.967	Esox_lucius
ENSXCOG00000013543	rpl29	67	69.767	ENSFCAG00000035470	-	58	68.182	Felis_catus
ENSXCOG00000013543	rpl29	98	61.905	ENSFCAG00000043006	-	78	61.905	Felis_catus
ENSXCOG00000013543	rpl29	72	93.478	ENSFALG00000008925	RPL29	81	94.545	Ficedula_albicollis
ENSXCOG00000013543	rpl29	100	93.750	ENSFHEG00000015425	rpl29	100	93.750	Fundulus_heteroclitus
ENSXCOG00000013543	rpl29	84	87.037	ENSGMOG00000003626	rpl29	80	86.885	Gadus_morhua
ENSXCOG00000013543	rpl29	86	98.182	ENSGALG00000026978	RPL29	77	98.182	Gallus_gallus
ENSXCOG00000013543	rpl29	100	96.875	ENSGAFG00000012868	rpl29	100	96.875	Gambusia_affinis
ENSXCOG00000013543	rpl29	95	88.525	ENSGACG00000007041	rpl29	79	88.525	Gasterosteus_aculeatus
ENSXCOG00000013543	rpl29	72	77.083	ENSGAGG00000024203	-	89	77.083	Gopherus_agassizii
ENSXCOG00000013543	rpl29	86	98.182	ENSGGOG00000024691	RPL29	62	91.892	Gorilla_gorilla
ENSXCOG00000013543	rpl29	100	93.750	ENSHBUG00000010519	rpl29	100	93.750	Haplochromis_burtoni
ENSXCOG00000013543	rpl29	95	95.082	ENSHCOG00000000478	rpl29	78	95.082	Hippocampus_comes
ENSXCOG00000013543	rpl29	86	96.364	ENSIPUG00000001196	rpl29	86	96.364	Ictalurus_punctatus
ENSXCOG00000013543	rpl29	84	98.148	ENSKMAG00000011291	rpl29	100	95.312	Kryptolebias_marmoratus
ENSXCOG00000013543	rpl29	84	90.741	ENSLBEG00000016213	rpl29	94	84.375	Labrus_bergylta
ENSXCOG00000013543	rpl29	95	88.525	ENSLACG00000018622	rpl29	95	88.525	Latimeria_chalumnae
ENSXCOG00000013543	rpl29	91	89.655	ENSLACG00000018031	-	90	88.525	Latimeria_chalumnae
ENSXCOG00000013543	rpl29	72	95.652	ENSLOCG00000013798	rpl29	92	91.667	Lepisosteus_oculatus
ENSXCOG00000013543	rpl29	84	96.296	ENSMAMG00000014274	rpl29	67	90.625	Mastacembelus_armatus
ENSXCOG00000013543	rpl29	100	93.750	ENSMZEG00005013519	rpl29	100	93.750	Maylandia_zebra
ENSXCOG00000013543	rpl29	86	98.182	ENSMGAG00000001213	RPL29	77	98.182	Meleagris_gallopavo
ENSXCOG00000013543	rpl29	77	83.673	ENSMICG00000049466	-	74	83.673	Microcebus_murinus
ENSXCOG00000013543	rpl29	100	90.625	ENSMMOG00000010430	rpl29	100	90.625	Mola_mola
ENSXCOG00000013543	rpl29	84	94.444	ENSMALG00000009023	rpl29	82	89.062	Monopterus_albus
ENSXCOG00000013543	rpl29	86	98.182	ENSMUSG00000048758	Rpl29	81	98.182	Mus_musculus
ENSXCOG00000013543	rpl29	100	93.750	ENSNBRG00000022109	rpl29	100	93.750	Neolamprologus_brichardi
ENSXCOG00000013543	rpl29	97	95.161	ENSONIG00000014377	rpl29	98	95.161	Oreochromis_niloticus
ENSXCOG00000013543	rpl29	100	90.625	ENSORLG00000023610	rpl29	67	90.625	Oryzias_latipes
ENSXCOG00000013543	rpl29	100	90.625	ENSORLG00020018665	rpl29	67	90.625	Oryzias_latipes_hni
ENSXCOG00000013543	rpl29	100	90.625	ENSORLG00015014455	rpl29	67	90.625	Oryzias_latipes_hsok
ENSXCOG00000013543	rpl29	100	92.188	ENSOMEG00000019919	rpl29	100	92.188	Oryzias_melastigma
ENSXCOG00000013543	rpl29	56	94.444	ENSPPAG00000037142	-	61	94.444	Pan_paniscus
ENSXCOG00000013543	rpl29	98	65.079	ENSPPRG00000011689	-	80	73.077	Panthera_pardus
ENSXCOG00000013543	rpl29	98	63.492	ENSPTIG00000011913	-	77	63.492	Panthera_tigris_altaica
ENSXCOG00000013543	rpl29	86	98.182	ENSPTRG00000043237	RPL29	63	91.892	Pan_troglodytes
ENSXCOG00000013543	rpl29	72	93.478	ENSPKIG00000025048	rpl29	94	88.710	Paramormyrops_kingsleyae
ENSXCOG00000013543	rpl29	72	97.826	ENSPSIG00000014699	RPL29	92	94.828	Pelodiscus_sinensis
ENSXCOG00000013543	rpl29	98	85.714	ENSPMGG00000005361	rpl29	93	85.714	Periophthalmus_magnuspinnatus
ENSXCOG00000013543	rpl29	95	98.361	ENSPFOG00000011385	rpl29	100	98.361	Poecilia_formosa
ENSXCOG00000013543	rpl29	78	98.000	ENSPLAG00000012042	rpl29	100	93.750	Poecilia_latipinna
ENSXCOG00000013543	rpl29	78	100.000	ENSPMEG00000018297	rpl29	100	95.312	Poecilia_mexicana
ENSXCOG00000013543	rpl29	78	100.000	ENSPREG00000007066	rpl29	100	95.312	Poecilia_reticulata
ENSXCOG00000013543	rpl29	100	93.750	ENSPNYG00000019481	rpl29	100	93.750	Pundamilia_nyererei
ENSXCOG00000013543	rpl29	92	93.220	ENSPNAG00000007550	rpl29	92	93.220	Pygocentrus_nattereri
ENSXCOG00000013543	rpl29	81	88.462	ENSRNOG00000025794	AABR07021239.1	69	88.462	Rattus_norvegicus
ENSXCOG00000013543	rpl29	72	73.913	YFR032C-A	RPL29	100	66.102	Saccharomyces_cerevisiae
ENSXCOG00000013543	rpl29	84	92.593	ENSSMAG00000013571	rpl29	100	87.500	Scophthalmus_maximus
ENSXCOG00000013543	rpl29	78	94.000	ENSSDUG00000016140	rpl29	100	87.500	Seriola_dumerili
ENSXCOG00000013543	rpl29	72	65.957	ENSSDUG00000020458	-	76	65.957	Seriola_dumerili
ENSXCOG00000013543	rpl29	78	94.000	ENSSLDG00000003932	rpl29	100	87.500	Seriola_lalandi_dorsalis
ENSXCOG00000013543	rpl29	72	97.826	ENSSPUG00000003760	RPL29	92	94.828	Sphenodon_punctatus
ENSXCOG00000013543	rpl29	84	87.037	ENSSPAG00000020292	rpl29	100	81.250	Stegastes_partitus
ENSXCOG00000013543	rpl29	84	68.519	ENSSSCG00000031314	-	85	68.519	Sus_scrofa
ENSXCOG00000013543	rpl29	59	92.105	ENSSSCG00000037047	-	96	93.617	Sus_scrofa
ENSXCOG00000013543	rpl29	72	93.478	ENSTGUG00000006027	RPL29	87	94.545	Taeniopygia_guttata
ENSXCOG00000013543	rpl29	95	86.885	ENSTRUG00000022273	rpl29	94	86.885	Takifugu_rubripes
ENSXCOG00000013543	rpl29	83	92.453	ENSTNIG00000014816	rpl29	90	90.164	Tetraodon_nigroviridis
ENSXCOG00000013543	rpl29	94	76.667	ENSTBEG00000000807	-	73	76.667	Tupaia_belangeri
ENSXCOG00000013543	rpl29	83	84.211	ENSUAMG00000002601	-	100	84.211	Ursus_americanus
ENSXCOG00000013543	rpl29	72	91.304	ENSVVUG00000012400	-	96	92.727	Vulpes_vulpes
ENSXCOG00000013543	rpl29	86	96.364	ENSXETG00000010811	rpl29	73	96.364	Xenopus_tropicalis
ENSXCOG00000013543	rpl29	100	96.875	ENSXMAG00000020948	rpl29	100	96.875	Xiphophorus_maculatus