EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000013552 (Gene tree)
Gene ID: -
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex%2C subunit 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 25921 bases
Position: chrKQ557212.1:3288618-3314538
Accession: ZDB-GENE-040915-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000017997	Not1	PF04054.15	3.1e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000018222	-	7002	-	ENSXCOP00000017997	2333 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013552's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013552	cnot1	100	89.525	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSXCOG00000013552	cnot1	100	91.628	ENSAPOG00000005042	cnot1	100	91.754	Acanthochromis_polyacanthus
ENSXCOG00000013552	cnot1	100	89.567	ENSAMEG00000017298	CNOT1	100	89.567	Ailuropoda_melanoleuca
ENSXCOG00000013552	cnot1	90	92.857	ENSACIG00000016003	cnot1	100	92.951	Amphilophus_citrinellus
ENSXCOG00000013552	cnot1	100	96.831	ENSAPEG00000022342	cnot1	100	96.831	Amphiprion_percula
ENSXCOG00000013552	cnot1	100	91.548	ENSATEG00000012892	cnot1	100	91.632	Anabas_testudineus
ENSXCOG00000013552	cnot1	100	88.474	ENSAPLG00000007162	CNOT1	100	88.768	Anas_platyrhynchos
ENSXCOG00000013552	cnot1	91	87.621	ENSACAG00000001602	CNOT1	98	87.830	Anolis_carolinensis
ENSXCOG00000013552	cnot1	100	86.544	ENSANAG00000038198	CNOT1	100	86.544	Aotus_nancymaae
ENSXCOG00000013552	cnot1	100	92.557	ENSACLG00000014234	cnot1	100	92.557	Astatotilapia_calliptera
ENSXCOG00000013552	cnot1	100	92.421	ENSAMXG00000013170	cnot1	100	92.632	Astyanax_mexicanus
ENSXCOG00000013552	cnot1	95	96.008	ENSBTAG00000020782	CNOT1	100	96.781	Bos_taurus
ENSXCOG00000013552	cnot1	79	41.227	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSXCOG00000013552	cnot1	100	89.253	ENSCJAG00000011318	CNOT1	100	92.182	Callithrix_jacchus
ENSXCOG00000013552	cnot1	100	89.108	ENSCAFG00000008426	CNOT1	100	89.108	Canis_familiaris
ENSXCOG00000013552	cnot1	100	90.621	ENSCAFG00020010156	CNOT1	100	93.587	Canis_lupus_dingo
ENSXCOG00000013552	cnot1	100	89.421	ENSCHIG00000010452	CNOT1	100	89.421	Capra_hircus
ENSXCOG00000013552	cnot1	100	89.379	ENSTSYG00000006888	CNOT1	100	89.379	Carlito_syrichta
ENSXCOG00000013552	cnot1	100	85.516	ENSCPOG00000013026	CNOT1	100	85.558	Cavia_porcellus
ENSXCOG00000013552	cnot1	100	87.741	ENSCCAG00000026333	CNOT1	100	87.741	Cebus_capucinus
ENSXCOG00000013552	cnot1	100	89.337	ENSCATG00000032625	CNOT1	100	89.337	Cercocebus_atys
ENSXCOG00000013552	cnot1	100	89.379	ENSCLAG00000006289	CNOT1	100	89.421	Chinchilla_lanigera
ENSXCOG00000013552	cnot1	100	89.337	ENSCSAG00000004731	CNOT1	100	89.337	Chlorocebus_sabaeus
ENSXCOG00000013552	cnot1	80	97.527	ENSCHOG00000009712	CNOT1	83	97.527	Choloepus_hoffmanni
ENSXCOG00000013552	cnot1	93	95.446	ENSCPBG00000026222	CNOT1	98	95.446	Chrysemys_picta_bellii
ENSXCOG00000013552	cnot1	100	58.164	ENSCING00000009149	-	100	57.914	Ciona_intestinalis
ENSXCOG00000013552	cnot1	89	62.277	ENSCSAVG00000002414	-	99	62.389	Ciona_savignyi
ENSXCOG00000013552	cnot1	100	87.620	ENSCANG00000040534	CNOT1	100	87.620	Colobus_angolensis_palliatus
ENSXCOG00000013552	cnot1	100	89.127	ENSCGRG00001016365	Cnot1	100	89.169	Cricetulus_griseus_chok1gshd
ENSXCOG00000013552	cnot1	100	89.127	ENSCGRG00000001714	Cnot1	100	89.169	Cricetulus_griseus_crigri
ENSXCOG00000013552	cnot1	97	100.000	ENSCVAG00000018930	cnot1	100	100.000	Cyprinodon_variegatus
ENSXCOG00000013552	cnot1	100	91.775	ENSDARG00000004174	cnot1	100	91.432	Danio_rerio
ENSXCOG00000013552	cnot1	100	87.159	ENSDNOG00000013250	CNOT1	100	87.117	Dasypus_novemcinctus
ENSXCOG00000013552	cnot1	99	46.184	FBgn0085436	Not1	96	53.085	Drosophila_melanogaster
ENSXCOG00000013552	cnot1	84	94.127	ENSETEG00000012806	CNOT1	84	94.127	Echinops_telfairi
ENSXCOG00000013552	cnot1	81	75.893	ENSEBUG00000011534	cnot1	95	75.893	Eptatretus_burgeri
ENSXCOG00000013552	cnot1	95	96.008	ENSEASG00005005819	CNOT1	100	96.781	Equus_asinus_asinus
ENSXCOG00000013552	cnot1	100	89.337	ENSECAG00000009889	CNOT1	100	89.337	Equus_caballus
ENSXCOG00000013552	cnot1	89	88.850	ENSEEUG00000006015	CNOT1	90	88.850	Erinaceus_europaeus
ENSXCOG00000013552	cnot1	100	93.828	ENSELUG00000014085	cnot1	100	93.528	Esox_lucius
ENSXCOG00000013552	cnot1	100	89.117	ENSFCAG00000025155	CNOT1	100	89.117	Felis_catus
ENSXCOG00000013552	cnot1	100	89.001	ENSFALG00000007285	CNOT1	100	89.001	Ficedula_albicollis
ENSXCOG00000013552	cnot1	100	89.337	ENSFDAG00000013399	CNOT1	100	89.379	Fukomys_damarensis
ENSXCOG00000013552	cnot1	100	96.259	ENSFHEG00000020574	cnot1	100	96.217	Fundulus_heteroclitus
ENSXCOG00000013552	cnot1	90	91.976	ENSGMOG00000012864	cnot1	100	91.929	Gadus_morhua
ENSXCOG00000013552	cnot1	100	88.875	ENSGALG00000002301	CNOT1	100	88.875	Gallus_gallus
ENSXCOG00000013552	cnot1	100	99.657	ENSGAFG00000015005	cnot1	100	99.657	Gambusia_affinis
ENSXCOG00000013552	cnot1	90	93.231	ENSGACG00000002606	cnot1	100	98.061	Gasterosteus_aculeatus
ENSXCOG00000013552	cnot1	100	89.085	ENSGAGG00000022646	CNOT1	100	91.470	Gopherus_agassizii
ENSXCOG00000013552	cnot1	100	89.379	ENSGGOG00000009547	CNOT1	100	89.379	Gorilla_gorilla
ENSXCOG00000013552	cnot1	100	92.641	ENSHBUG00000001729	cnot1	100	92.641	Haplochromis_burtoni
ENSXCOG00000013552	cnot1	100	89.253	ENSHGLG00000014322	CNOT1	100	89.295	Heterocephalus_glaber_female
ENSXCOG00000013552	cnot1	100	92.743	ENSHCOG00000006501	cnot1	100	92.659	Hippocampus_comes
ENSXCOG00000013552	cnot1	100	93.462	ENSIPUG00000011915	cnot1	100	93.462	Ictalurus_punctatus
ENSXCOG00000013552	cnot1	100	89.295	ENSSTOG00000005490	CNOT1	100	89.295	Ictidomys_tridecemlineatus
ENSXCOG00000013552	cnot1	100	88.791	ENSJJAG00000000633	Cnot1	100	88.833	Jaculus_jaculus
ENSXCOG00000013552	cnot1	100	94.964	ENSKMAG00000006149	cnot1	100	94.964	Kryptolebias_marmoratus
ENSXCOG00000013552	cnot1	95	98.204	ENSLBEG00000004740	cnot1	100	98.994	Labrus_bergylta
ENSXCOG00000013552	cnot1	100	89.547	ENSLACG00000010869	CNOT1	100	89.463	Latimeria_chalumnae
ENSXCOG00000013552	cnot1	100	92.191	ENSLOCG00000006324	cnot1	100	92.191	Lepisosteus_oculatus
ENSXCOG00000013552	cnot1	100	89.220	ENSLAFG00000000098	CNOT1	100	89.220	Loxodonta_africana
ENSXCOG00000013552	cnot1	100	89.525	ENSMFAG00000035888	CNOT1	100	89.525	Macaca_fascicularis
ENSXCOG00000013552	cnot1	100	89.295	ENSMMUG00000014625	CNOT1	94	98.545	Macaca_mulatta
ENSXCOG00000013552	cnot1	100	86.815	ENSMNEG00000031820	CNOT1	100	88.961	Macaca_nemestrina
ENSXCOG00000013552	cnot1	100	87.987	ENSMLEG00000040933	CNOT1	100	87.987	Mandrillus_leucophaeus
ENSXCOG00000013552	cnot1	100	94.861	ENSMAMG00000016524	cnot1	100	94.946	Mastacembelus_armatus
ENSXCOG00000013552	cnot1	100	89.268	ENSMZEG00005016210	cnot1	100	89.226	Maylandia_zebra
ENSXCOG00000013552	cnot1	100	89.104	ENSMGAG00000001908	CNOT1	100	89.104	Meleagris_gallopavo
ENSXCOG00000013552	cnot1	100	89.571	ENSMICG00000007071	CNOT1	100	89.571	Microcebus_murinus
ENSXCOG00000013552	cnot1	100	89.127	ENSMOCG00000017969	Cnot1	100	89.169	Microtus_ochrogaster
ENSXCOG00000013552	cnot1	100	90.282	ENSMMOG00000019134	cnot1	100	90.408	Mola_mola
ENSXCOG00000013552	cnot1	100	88.796	ENSMODG00000014199	CNOT1	100	89.089	Monodelphis_domestica
ENSXCOG00000013552	cnot1	100	96.017	ENSMALG00000008645	cnot1	100	96.017	Monopterus_albus
ENSXCOG00000013552	cnot1	95	95.238	MGP_CAROLIEiJ_G0031430	Cnot1	92	95.238	Mus_caroli
ENSXCOG00000013552	cnot1	100	89.272	ENSMUSG00000036550	Cnot1	100	89.314	Mus_musculus
ENSXCOG00000013552	cnot1	100	89.169	MGP_PahariEiJ_G0023028	Cnot1	100	89.211	Mus_pahari
ENSXCOG00000013552	cnot1	100	89.169	MGP_SPRETEiJ_G0032549	Cnot1	100	89.211	Mus_spretus
ENSXCOG00000013552	cnot1	100	89.379	ENSMPUG00000004830	CNOT1	100	89.379	Mustela_putorius_furo
ENSXCOG00000013552	cnot1	100	89.211	ENSMLUG00000003728	CNOT1	100	89.169	Myotis_lucifugus
ENSXCOG00000013552	cnot1	100	89.211	ENSNGAG00000018628	Cnot1	100	89.253	Nannospalax_galili
ENSXCOG00000013552	cnot1	97	88.225	ENSNBRG00000019358	cnot1	100	88.225	Neolamprologus_brichardi
ENSXCOG00000013552	cnot1	100	89.374	ENSNLEG00000003566	CNOT1	100	89.374	Nomascus_leucogenys
ENSXCOG00000013552	cnot1	87	90.828	ENSMEUG00000006145	CNOT1	86	90.828	Notamacropus_eugenii
ENSXCOG00000013552	cnot1	85	97.778	ENSOPRG00000005604	CNOT1	86	97.778	Ochotona_princeps
ENSXCOG00000013552	cnot1	100	89.295	ENSODEG00000016337	CNOT1	100	89.337	Octodon_degus
ENSXCOG00000013552	cnot1	100	94.407	ENSONIG00000007358	cnot1	100	94.407	Oreochromis_niloticus
ENSXCOG00000013552	cnot1	90	88.522	ENSOANG00000012109	CNOT1	100	88.983	Ornithorhynchus_anatinus
ENSXCOG00000013552	cnot1	100	89.337	ENSOCUG00000006911	CNOT1	100	89.337	Oryctolagus_cuniculus
ENSXCOG00000013552	cnot1	100	93.947	ENSORLG00000013734	cnot1	100	93.947	Oryzias_latipes
ENSXCOG00000013552	cnot1	100	92.211	ENSORLG00020017012	cnot1	100	92.168	Oryzias_latipes_hni
ENSXCOG00000013552	cnot1	100	92.126	ENSORLG00015007091	cnot1	100	92.084	Oryzias_latipes_hsok
ENSXCOG00000013552	cnot1	100	91.425	ENSOMEG00000015124	cnot1	100	91.173	Oryzias_melastigma
ENSXCOG00000013552	cnot1	100	89.379	ENSOGAG00000000543	CNOT1	100	89.379	Otolemur_garnettii
ENSXCOG00000013552	cnot1	100	89.421	ENSOARG00000001567	CNOT1	100	89.421	Ovis_aries
ENSXCOG00000013552	cnot1	100	89.337	ENSPPAG00000022013	CNOT1	100	89.337	Pan_paniscus
ENSXCOG00000013552	cnot1	100	89.379	ENSPPRG00000004867	CNOT1	100	89.379	Panthera_pardus
ENSXCOG00000013552	cnot1	100	89.379	ENSPTIG00000012589	CNOT1	100	89.379	Panthera_tigris_altaica
ENSXCOG00000013552	cnot1	100	89.075	ENSPTRG00000008183	CNOT1	100	89.075	Pan_troglodytes
ENSXCOG00000013552	cnot1	100	86.366	ENSPANG00000020901	CNOT1	100	86.366	Papio_anubis
ENSXCOG00000013552	cnot1	100	93.999	ENSPKIG00000023538	CNOT1	100	94.042	Paramormyrops_kingsleyae
ENSXCOG00000013552	cnot1	100	85.911	ENSPKIG00000002914	CNOT1	100	85.661	Paramormyrops_kingsleyae
ENSXCOG00000013552	cnot1	100	89.001	ENSPSIG00000005499	CNOT1	100	89.001	Pelodiscus_sinensis
ENSXCOG00000013552	cnot1	100	78.646	ENSPMAG00000009381	cnot1	100	78.562	Petromyzon_marinus
ENSXCOG00000013552	cnot1	95	96.208	ENSPCIG00000007343	CNOT1	100	96.982	Phascolarctos_cinereus
ENSXCOG00000013552	cnot1	99	97.331	ENSPFOG00000003497	cnot1	100	97.331	Poecilia_formosa
ENSXCOG00000013552	cnot1	95	98.603	ENSPLAG00000014018	cnot1	100	98.603	Poecilia_latipinna
ENSXCOG00000013552	cnot1	95	98.603	ENSPMEG00000005868	cnot1	100	98.603	Poecilia_mexicana
ENSXCOG00000013552	cnot1	95	98.802	ENSPREG00000018793	cnot1	100	98.802	Poecilia_reticulata
ENSXCOG00000013552	cnot1	100	89.379	ENSPPYG00000007410	CNOT1	100	89.379	Pongo_abelii
ENSXCOG00000013552	cnot1	87	88.298	ENSPCAG00000003241	CNOT1	88	88.298	Procavia_capensis
ENSXCOG00000013552	cnot1	100	89.266	ENSPCOG00000027139	CNOT1	100	89.266	Propithecus_coquereli
ENSXCOG00000013552	cnot1	100	86.608	ENSPVAG00000004243	CNOT1	100	86.860	Pteropus_vampyrus
ENSXCOG00000013552	cnot1	100	91.354	ENSPNYG00000012919	cnot1	100	91.312	Pundamilia_nyererei
ENSXCOG00000013552	cnot1	100	94.213	ENSPNAG00000000246	cnot1	100	94.256	Pygocentrus_nattereri
ENSXCOG00000013552	cnot1	100	89.127	ENSRNOG00000012271	Cnot1	100	89.169	Rattus_norvegicus
ENSXCOG00000013552	cnot1	100	87.191	ENSRBIG00000044598	CNOT1	100	87.191	Rhinopithecus_bieti
ENSXCOG00000013552	cnot1	100	89.337	ENSRROG00000000906	CNOT1	100	89.337	Rhinopithecus_roxellana
ENSXCOG00000013552	cnot1	100	85.136	ENSSBOG00000029155	CNOT1	100	85.136	Saimiri_boliviensis_boliviensis
ENSXCOG00000013552	cnot1	100	89.169	ENSSHAG00000012187	CNOT1	100	89.127	Sarcophilus_harrisii
ENSXCOG00000013552	cnot1	100	90.185	ENSSFOG00015017614	cnot1	100	89.975	Scleropages_formosus
ENSXCOG00000013552	cnot1	100	92.324	ENSSMAG00000013844	cnot1	100	92.368	Scophthalmus_maximus
ENSXCOG00000013552	cnot1	100	91.253	ENSSDUG00000021491	cnot1	100	91.337	Seriola_dumerili
ENSXCOG00000013552	cnot1	100	94.105	ENSSLDG00000014816	cnot1	100	94.105	Seriola_lalandi_dorsalis
ENSXCOG00000013552	cnot1	83	97.400	ENSSARG00000000762	CNOT1	88	97.400	Sorex_araneus
ENSXCOG00000013552	cnot1	100	96.747	ENSSPAG00000018802	cnot1	100	96.747	Stegastes_partitus
ENSXCOG00000013552	cnot1	100	91.127	ENSSSCG00000002799	CNOT1	100	96.781	Sus_scrofa
ENSXCOG00000013552	cnot1	100	88.931	ENSTGUG00000005919	CNOT1	100	88.931	Taeniopygia_guttata
ENSXCOG00000013552	cnot1	100	92.005	ENSTNIG00000018706	cnot1	100	91.879	Tetraodon_nigroviridis
ENSXCOG00000013552	cnot1	82	98.592	ENSTBEG00000000720	CNOT1	80	98.592	Tupaia_belangeri
ENSXCOG00000013552	cnot1	95	88.037	ENSTTRG00000008460	CNOT1	95	88.037	Tursiops_truncatus
ENSXCOG00000013552	cnot1	100	89.379	ENSUAMG00000009251	CNOT1	100	89.379	Ursus_americanus
ENSXCOG00000013552	cnot1	100	89.379	ENSUMAG00000021291	CNOT1	100	89.379	Ursus_maritimus
ENSXCOG00000013552	cnot1	97	91.766	ENSVPAG00000008846	CNOT1	97	91.766	Vicugna_pacos
ENSXCOG00000013552	cnot1	100	90.621	ENSVVUG00000024037	CNOT1	100	93.587	Vulpes_vulpes
ENSXCOG00000013552	cnot1	100	83.879	ENSXETG00000015900	cnot1	100	83.879	Xenopus_tropicalis
ENSXCOG00000013552	cnot1	100	99.957	ENSXMAG00000006031	cnot1	100	99.957	Xiphophorus_maculatus