EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000013594 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3403 bases
Position: chrKQ557220.1:10049519-10052921
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000018043	MMR_HSR1	PF01926.23	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000018270	-	771	-	ENSXCOP00000018043	256 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013594's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000013594	-	68	33.526	ENSXCOG00000006729	-	75	33.526
ENSXCOG00000013594	-	84	33.023	ENSXCOG00000014518	-	68	33.054
ENSXCOG00000013594	-	84	37.209	ENSXCOG00000014517	-	69	37.209
ENSXCOG00000013594	-	90	36.957	ENSXCOG00000009375	si:ch211-113e8.5	80	36.957
ENSXCOG00000013594	-	83	34.091	ENSXCOG00000006802	-	71	34.091
ENSXCOG00000013594	-	80	37.264	ENSXCOG00000006801	-	68	35.714
ENSXCOG00000013594	-	86	33.333	ENSXCOG00000017908	-	64	33.333
ENSXCOG00000013594	-	90	35.565	ENSXCOG00000013367	-	73	35.565
ENSXCOG00000013594	-	86	34.545	ENSXCOG00000011339	-	78	34.545
ENSXCOG00000013594	-	76	36.598	ENSXCOG00000018342	-	62	36.598
ENSXCOG00000013594	-	90	34.132	ENSXCOG00000006733	-	89	34.132
ENSXCOG00000013594	-	94	34.025	ENSXCOG00000018711	-	73	35.294
ENSXCOG00000013594	-	75	33.333	ENSXCOG00000018335	-	67	33.333
ENSXCOG00000013594	-	85	32.110	ENSXCOG00000018338	-	87	32.110
ENSXCOG00000013594	-	86	36.652	ENSXCOG00000019572	-	63	36.652
ENSXCOG00000013594	-	86	37.104	ENSXCOG00000019571	-	69	37.104
ENSXCOG00000013594	-	86	37.104	ENSXCOG00000009883	-	69	37.104
ENSXCOG00000013594	-	92	36.250	ENSXCOG00000016294	-	75	36.250
ENSXCOG00000013594	-	89	32.627	ENSXCOG00000016292	-	82	32.627
ENSXCOG00000013594	-	81	33.491	ENSXCOG00000016293	-	86	33.491
ENSXCOG00000013594	-	80	35.545	ENSXCOG00000016291	-	95	35.545
ENSXCOG00000013594	-	72	38.298	ENSXCOG00000018421	-	77	38.298
ENSXCOG00000013594	-	80	36.765	ENSXCOG00000014966	zgc:113625	82	36.765
ENSXCOG00000013594	-	75	32.292	ENSXCOG00000014967	zgc:172131	88	32.292
ENSXCOG00000013594	-	77	37.198	ENSXCOG00000009005	-	88	34.940
ENSXCOG00000013594	-	86	33.597	ENSXCOG00000012536	-	72	37.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013594	-	86	52.764	ENSAMXG00000040688	-	58	52.764	Astyanax_mexicanus
ENSXCOG00000013594	-	88	45.339	ENSIPUG00000004642	si:dkeyp-69e1.8	62	45.339	Ictalurus_punctatus
ENSXCOG00000013594	-	89	74.890	ENSMMOG00000008509	-	74	74.890	Mola_mola
ENSXCOG00000013594	-	93	92.887	ENSPFOG00000013403	-	73	92.887	Poecilia_formosa
ENSXCOG00000013594	-	90	51.770	ENSPNAG00000000165	-	58	51.770	Pygocentrus_nattereri
ENSXCOG00000013594	-	96	97.166	ENSXMAG00000025089	-	86	97.166	Xiphophorus_maculatus