EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000013626 (Gene tree)
Gene ID: -
Gene Symbol: utp6
Alias: zgc:55648
Full Name: UTP6%2C small subunit (SSU) processome component%2C homolog (yeast)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 7721 bases
Position: chrKQ557220.1:10590936-10598656
Accession: ZDB-GENE-040426-769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000018082	U3_assoc_6	PF08640.11	7.2e-25	1	1
ENSXCOP00000018083	U3_assoc_6	PF08640.11	7.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000018311	-	1794	-	ENSXCOP00000018082	597 (aa)	-	-
ENSXCOT00000018312	-	306	-	ENSXCOP00000018083	101 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013626's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013626	utp6	100	66.667	ENSG00000108651	UTP6	100	55.760	Homo_sapiens
ENSXCOG00000013626	utp6	100	93.243	ENSAPOG00000000435	utp6	100	86.935	Acanthochromis_polyacanthus
ENSXCOG00000013626	utp6	99	54.849	ENSAMEG00000005443	UTP6	99	54.849	Ailuropoda_melanoleuca
ENSXCOG00000013626	utp6	100	94.595	ENSACIG00000004124	utp6	100	81.742	Amphilophus_citrinellus
ENSXCOG00000013626	utp6	100	94.595	ENSAOCG00000016812	utp6	100	85.762	Amphiprion_ocellaris
ENSXCOG00000013626	utp6	100	93.243	ENSAPEG00000023565	utp6	100	85.762	Amphiprion_percula
ENSXCOG00000013626	utp6	100	93.243	ENSATEG00000003401	utp6	100	86.600	Anabas_testudineus
ENSXCOG00000013626	utp6	92	75.862	ENSAPLG00000005821	UTP6	99	55.330	Anas_platyrhynchos
ENSXCOG00000013626	utp6	100	70.833	ENSACAG00000009472	UTP6	100	57.596	Anolis_carolinensis
ENSXCOG00000013626	utp6	100	65.278	ENSANAG00000034603	UTP6	99	60.160	Aotus_nancymaae
ENSXCOG00000013626	utp6	100	95.946	ENSACLG00000006728	utp6	100	85.260	Astatotilapia_calliptera
ENSXCOG00000013626	utp6	100	81.944	ENSAMXG00000009478	utp6	100	72.194	Astyanax_mexicanus
ENSXCOG00000013626	utp6	100	50.833	ENSBTAG00000003769	-	98	50.833	Bos_taurus
ENSXCOG00000013626	utp6	100	60.000	ENSBTAG00000015612	UTP6	100	52.500	Bos_taurus
ENSXCOG00000013626	utp6	100	65.278	ENSCJAG00000014115	UTP6	100	55.760	Callithrix_jacchus
ENSXCOG00000013626	utp6	100	55.000	ENSCAFG00000018507	UTP6	100	55.000	Canis_familiaris
ENSXCOG00000013626	utp6	100	55.000	ENSCAFG00020014678	UTP6	100	55.000	Canis_lupus_dingo
ENSXCOG00000013626	utp6	100	52.326	ENSCHIG00000009726	-	100	52.326	Capra_hircus
ENSXCOG00000013626	utp6	100	52.326	ENSCHIG00000017954	-	100	52.326	Capra_hircus
ENSXCOG00000013626	utp6	99	50.167	ENSTSYG00000002202	UTP6	99	50.167	Carlito_syrichta
ENSXCOG00000013626	utp6	86	49.130	ENSCAPG00000017595	UTP6	93	48.936	Cavia_aperea
ENSXCOG00000013626	utp6	99	55.686	ENSCPOG00000014294	UTP6	100	55.686	Cavia_porcellus
ENSXCOG00000013626	utp6	100	65.278	ENSCCAG00000033318	-	100	51.419	Cebus_capucinus
ENSXCOG00000013626	utp6	100	66.667	ENSCATG00000034868	UTP6	100	54.833	Cercocebus_atys
ENSXCOG00000013626	utp6	99	55.853	ENSCLAG00000007274	UTP6	99	55.853	Chinchilla_lanigera
ENSXCOG00000013626	utp6	100	66.667	ENSCSAG00000006595	UTP6	100	54.667	Chlorocebus_sabaeus
ENSXCOG00000013626	utp6	71	62.500	ENSCHOG00000010940	-	73	46.739	Choloepus_hoffmanni
ENSXCOG00000013626	utp6	100	73.611	ENSCPBG00000004652	UTP6	100	59.432	Chrysemys_picta_bellii
ENSXCOG00000013626	utp6	99	31.767	ENSCING00000022947	-	99	31.767	Ciona_intestinalis
ENSXCOG00000013626	utp6	71	58.333	ENSCSAVG00000011416	-	99	37.003	Ciona_savignyi
ENSXCOG00000013626	utp6	71	65.278	ENSCANG00000031141	UTP6	89	39.658	Colobus_angolensis_palliatus
ENSXCOG00000013626	utp6	99	54.758	ENSCGRG00001000046	Utp6	100	54.758	Cricetulus_griseus_chok1gshd
ENSXCOG00000013626	utp6	95	53.521	ENSCGRG00000011543	Utp6	100	53.521	Cricetulus_griseus_crigri
ENSXCOG00000013626	utp6	96	96.667	ENSCSEG00000013422	utp6	100	88.525	Cynoglossus_semilaevis
ENSXCOG00000013626	utp6	100	97.297	ENSCVAG00000020322	utp6	100	90.117	Cyprinodon_variegatus
ENSXCOG00000013626	utp6	100	77.778	ENSDARG00000098433	utp6	100	79.006	Danio_rerio
ENSXCOG00000013626	utp6	100	55.500	ENSDNOG00000037018	UTP6	100	55.500	Dasypus_novemcinctus
ENSXCOG00000013626	utp6	95	53.616	ENSDORG00000003843	Utp6	99	56.227	Dipodomys_ordii
ENSXCOG00000013626	utp6	71	68.056	ENSEBUG00000000334	-	96	60.714	Eptatretus_burgeri
ENSXCOG00000013626	utp6	100	65.278	ENSEASG00005010870	UTP6	100	55.574	Equus_asinus_asinus
ENSXCOG00000013626	utp6	100	65.278	ENSECAG00000022217	UTP6	100	55.333	Equus_caballus
ENSXCOG00000013626	utp6	100	84.722	ENSELUG00000006618	utp6	100	74.372	Esox_lucius
ENSXCOG00000013626	utp6	100	66.667	ENSFCAG00000015795	UTP6	100	53.542	Felis_catus
ENSXCOG00000013626	utp6	100	79.310	ENSFALG00000002282	UTP6	100	58.431	Ficedula_albicollis
ENSXCOG00000013626	utp6	99	68.056	ENSFDAG00000019506	UTP6	100	55.518	Fukomys_damarensis
ENSXCOG00000013626	utp6	100	93.243	ENSFHEG00000010373	utp6	100	87.102	Fundulus_heteroclitus
ENSXCOG00000013626	utp6	100	83.784	ENSGMOG00000011958	utp6	100	73.032	Gadus_morhua
ENSXCOG00000013626	utp6	100	72.414	ENSGALG00000003260	UTP6	100	58.598	Gallus_gallus
ENSXCOG00000013626	utp6	100	97.297	ENSGAFG00000008505	utp6	100	96.482	Gambusia_affinis
ENSXCOG00000013626	utp6	100	89.189	ENSGACG00000019424	utp6	100	83.250	Gasterosteus_aculeatus
ENSXCOG00000013626	utp6	100	79.310	ENSGAGG00000004820	UTP6	100	58.765	Gopherus_agassizii
ENSXCOG00000013626	utp6	100	66.667	ENSGGOG00000013569	UTP6	100	56.093	Gorilla_gorilla
ENSXCOG00000013626	utp6	100	45.485	ENSGGOG00000026003	-	100	45.485	Gorilla_gorilla
ENSXCOG00000013626	utp6	100	95.946	ENSHBUG00000018668	utp6	100	85.260	Haplochromis_burtoni
ENSXCOG00000013626	utp6	99	55.518	ENSHGLG00000010332	UTP6	100	55.518	Heterocephalus_glaber_female
ENSXCOG00000013626	utp6	99	51.765	ENSHGLG00000008642	-	99	51.765	Heterocephalus_glaber_female
ENSXCOG00000013626	utp6	95	52.807	ENSHGLG00100006047	-	99	52.807	Heterocephalus_glaber_male
ENSXCOG00000013626	utp6	99	52.843	ENSHGLG00100014271	-	100	52.843	Heterocephalus_glaber_male
ENSXCOG00000013626	utp6	100	89.474	ENSHCOG00000017277	utp6	100	78.224	Hippocampus_comes
ENSXCOG00000013626	utp6	100	81.944	ENSIPUG00000022587	Utp6	100	70.352	Ictalurus_punctatus
ENSXCOG00000013626	utp6	99	56.833	ENSSTOG00000015875	UTP6	100	56.833	Ictidomys_tridecemlineatus
ENSXCOG00000013626	utp6	100	97.297	ENSKMAG00000021631	utp6	100	87.102	Kryptolebias_marmoratus
ENSXCOG00000013626	utp6	100	96.667	ENSLBEG00000002115	utp6	100	84.590	Labrus_bergylta
ENSXCOG00000013626	utp6	100	83.333	ENSLACG00000017158	UTP6	100	61.937	Latimeria_chalumnae
ENSXCOG00000013626	utp6	91	67.093	ENSLOCG00000013797	utp6	90	67.093	Lepisosteus_oculatus
ENSXCOG00000013626	utp6	100	65.278	ENSLAFG00000013008	UTP6	100	55.408	Loxodonta_africana
ENSXCOG00000013626	utp6	100	66.667	ENSMFAG00000038842	UTP6	100	54.500	Macaca_fascicularis
ENSXCOG00000013626	utp6	85	44.660	ENSMFAG00000041904	-	94	45.641	Macaca_fascicularis
ENSXCOG00000013626	utp6	100	66.667	ENSMMUG00000020403	UTP6	100	54.500	Macaca_mulatta
ENSXCOG00000013626	utp6	100	66.667	ENSMNEG00000039480	UTP6	100	54.500	Macaca_nemestrina
ENSXCOG00000013626	utp6	100	66.667	ENSMLEG00000032174	UTP6	100	56.000	Mandrillus_leucophaeus
ENSXCOG00000013626	utp6	100	43.500	ENSMLEG00000039364	-	100	43.167	Mandrillus_leucophaeus
ENSXCOG00000013626	utp6	100	93.243	ENSMAMG00000002228	utp6	99	85.427	Mastacembelus_armatus
ENSXCOG00000013626	utp6	100	95.946	ENSMZEG00005023895	utp6	100	85.260	Maylandia_zebra
ENSXCOG00000013626	utp6	95	56.942	ENSMGAG00000008111	UTP6	100	56.942	Meleagris_gallopavo
ENSXCOG00000013626	utp6	99	54.667	ENSMAUG00000021895	Utp6	100	54.667	Mesocricetus_auratus
ENSXCOG00000013626	utp6	100	61.111	ENSMICG00000002632	UTP6	100	54.409	Microcebus_murinus
ENSXCOG00000013626	utp6	99	54.833	ENSMOCG00000014163	Utp6	100	54.833	Microtus_ochrogaster
ENSXCOG00000013626	utp6	100	82.432	ENSMMOG00000008653	utp6	100	84.746	Mola_mola
ENSXCOG00000013626	utp6	100	70.833	ENSMODG00000019206	UTP6	100	57.546	Monodelphis_domestica
ENSXCOG00000013626	utp6	100	90.541	ENSMALG00000021112	utp6	100	85.595	Monopterus_albus
ENSXCOG00000013626	utp6	99	54.333	MGP_CAROLIEiJ_G0016828	Utp6	100	54.333	Mus_caroli
ENSXCOG00000013626	utp6	99	54.333	ENSMUSG00000035575	Utp6	100	54.333	Mus_musculus
ENSXCOG00000013626	utp6	99	49.667	MGP_PahariEiJ_G0017965	Utp6	100	49.500	Mus_pahari
ENSXCOG00000013626	utp6	99	54.167	MGP_SPRETEiJ_G0017672	Utp6	100	54.167	Mus_spretus
ENSXCOG00000013626	utp6	100	65.278	ENSMPUG00000014581	UTP6	100	54.050	Mustela_putorius_furo
ENSXCOG00000013626	utp6	100	66.667	ENSMLUG00000016422	UTP6	100	55.740	Myotis_lucifugus
ENSXCOG00000013626	utp6	99	56.167	ENSNGAG00000015482	Utp6	100	56.167	Nannospalax_galili
ENSXCOG00000013626	utp6	100	95.946	ENSNBRG00000019714	utp6	100	85.260	Neolamprologus_brichardi
ENSXCOG00000013626	utp6	100	66.667	ENSNLEG00000011009	UTP6	100	55.092	Nomascus_leucogenys
ENSXCOG00000013626	utp6	99	58.621	ENSOPRG00000008446	-	89	56.738	Ochotona_princeps
ENSXCOG00000013626	utp6	71	69.444	ENSODEG00000011971	UTP6	98	61.603	Octodon_degus
ENSXCOG00000013626	utp6	100	95.946	ENSONIG00000018090	utp6	100	84.590	Oreochromis_niloticus
ENSXCOG00000013626	utp6	98	56.949	ENSOANG00000004279	UTP6	99	56.949	Ornithorhynchus_anatinus
ENSXCOG00000013626	utp6	99	53.833	ENSOCUG00000016980	UTP6	99	53.833	Oryctolagus_cuniculus
ENSXCOG00000013626	utp6	99	91.892	ENSORLG00000003546	utp6	64	82.886	Oryzias_latipes
ENSXCOG00000013626	utp6	99	91.892	ENSORLG00020010377	utp6	99	82.886	Oryzias_latipes_hni
ENSXCOG00000013626	utp6	99	91.892	ENSORLG00015008893	utp6	99	82.550	Oryzias_latipes_hsok
ENSXCOG00000013626	utp6	100	90.541	ENSOMEG00000017487	utp6	100	82.580	Oryzias_melastigma
ENSXCOG00000013626	utp6	71	65.278	ENSOGAG00000004511	UTP6	100	48.767	Otolemur_garnettii
ENSXCOG00000013626	utp6	100	52.492	ENSOARG00000013474	UTP6	100	52.492	Ovis_aries
ENSXCOG00000013626	utp6	100	45.819	ENSPPAG00000016895	-	100	45.819	Pan_paniscus
ENSXCOG00000013626	utp6	100	66.667	ENSPPAG00000038089	UTP6	100	55.927	Pan_paniscus
ENSXCOG00000013626	utp6	100	66.667	ENSPPRG00000001010	UTP6	100	56.073	Panthera_pardus
ENSXCOG00000013626	utp6	100	66.667	ENSPTIG00000013913	UTP6	100	56.073	Panthera_tigris_altaica
ENSXCOG00000013626	utp6	100	66.667	ENSPTRG00000008977	UTP6	100	55.927	Pan_troglodytes
ENSXCOG00000013626	utp6	100	45.987	ENSPTRG00000044798	-	100	45.987	Pan_troglodytes
ENSXCOG00000013626	utp6	99	43.239	ENSPANG00000034274	-	100	42.833	Papio_anubis
ENSXCOG00000013626	utp6	100	66.667	ENSPANG00000023113	UTP6	100	52.413	Papio_anubis
ENSXCOG00000013626	utp6	100	80.822	ENSPKIG00000004653	utp6	100	69.000	Paramormyrops_kingsleyae
ENSXCOG00000013626	utp6	100	73.611	ENSPSIG00000012435	UTP6	100	59.030	Pelodiscus_sinensis
ENSXCOG00000013626	utp6	100	92.105	ENSPMGG00000009548	utp6	100	82.580	Periophthalmus_magnuspinnatus
ENSXCOG00000013626	utp6	99	54.333	ENSPEMG00000014081	Utp6	100	54.333	Peromyscus_maniculatus_bairdii
ENSXCOG00000013626	utp6	93	42.882	ENSPMAG00000009561	utp6	100	42.882	Petromyzon_marinus
ENSXCOG00000013626	utp6	100	72.222	ENSPCIG00000029968	UTP6	86	59.766	Phascolarctos_cinereus
ENSXCOG00000013626	utp6	100	95.946	ENSPFOG00000013918	utp6	100	94.305	Poecilia_formosa
ENSXCOG00000013626	utp6	100	97.297	ENSPLAG00000017825	utp6	100	94.137	Poecilia_latipinna
ENSXCOG00000013626	utp6	100	95.946	ENSPMEG00000008133	utp6	100	94.640	Poecilia_mexicana
ENSXCOG00000013626	utp6	100	93.243	ENSPREG00000013108	utp6	99	92.295	Poecilia_reticulata
ENSXCOG00000013626	utp6	100	65.278	ENSPPYG00000008154	UTP6	100	53.088	Pongo_abelii
ENSXCOG00000013626	utp6	71	43.056	ENSPCAG00000014878	-	53	48.276	Procavia_capensis
ENSXCOG00000013626	utp6	100	63.889	ENSPCOG00000010224	UTP6	100	54.243	Propithecus_coquereli
ENSXCOG00000013626	utp6	100	65.278	ENSPVAG00000015759	UTP6	100	52.080	Pteropus_vampyrus
ENSXCOG00000013626	utp6	100	95.946	ENSPNYG00000002290	utp6	100	84.925	Pundamilia_nyererei
ENSXCOG00000013626	utp6	100	79.167	ENSPNAG00000027370	utp6	100	68.677	Pygocentrus_nattereri
ENSXCOG00000013626	utp6	99	54.167	ENSRNOG00000014209	Utp6	100	54.167	Rattus_norvegicus
ENSXCOG00000013626	utp6	100	66.667	ENSRBIG00000020822	UTP6	100	54.333	Rhinopithecus_bieti
ENSXCOG00000013626	utp6	100	66.667	ENSRROG00000036838	UTP6	100	54.333	Rhinopithecus_roxellana
ENSXCOG00000013626	utp6	100	82.759	ENSSFOG00015005978	utp6	100	70.333	Scleropages_formosus
ENSXCOG00000013626	utp6	100	96.667	ENSSMAG00000014772	utp6	100	86.935	Scophthalmus_maximus
ENSXCOG00000013626	utp6	100	93.333	ENSSDUG00000000329	utp6	100	87.437	Seriola_dumerili
ENSXCOG00000013626	utp6	100	93.333	ENSSLDG00000016724	utp6	100	86.600	Seriola_lalandi_dorsalis
ENSXCOG00000013626	utp6	99	48.662	ENSSARG00000010778	UTP6	99	48.662	Sorex_araneus
ENSXCOG00000013626	utp6	100	79.310	ENSSPUG00000005273	UTP6	100	60.100	Sphenodon_punctatus
ENSXCOG00000013626	utp6	100	89.189	ENSSPAG00000011871	utp6	99	84.590	Stegastes_partitus
ENSXCOG00000013626	utp6	100	56.073	ENSSSCG00000017745	UTP6	100	61.111	Sus_scrofa
ENSXCOG00000013626	utp6	100	79.310	ENSTGUG00000004999	UTP6	100	58.097	Taeniopygia_guttata
ENSXCOG00000013626	utp6	99	85.135	ENSTRUG00000012005	utp6	100	80.369	Takifugu_rubripes
ENSXCOG00000013626	utp6	99	82.432	ENSTNIG00000003235	utp6	100	79.195	Tetraodon_nigroviridis
ENSXCOG00000013626	utp6	68	56.906	ENSTBEG00000005388	-	67	56.906	Tupaia_belangeri
ENSXCOG00000013626	utp6	100	54.908	ENSTTRG00000009911	UTP6	100	54.908	Tursiops_truncatus
ENSXCOG00000013626	utp6	99	54.849	ENSUMAG00000015139	UTP6	99	54.849	Ursus_maritimus
ENSXCOG00000013626	utp6	100	64.384	ENSVPAG00000005782	UTP6	100	54.908	Vicugna_pacos
ENSXCOG00000013626	utp6	100	65.278	ENSVVUG00000012238	UTP6	100	55.167	Vulpes_vulpes
ENSXCOG00000013626	utp6	100	75.862	ENSXETG00000020057	utp6	100	50.584	Xenopus_tropicalis
ENSXCOG00000013626	utp6	100	98.827	ENSXMAG00000017414	utp6	100	98.827	Xiphophorus_maculatus