EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000013628 (Gene tree)
Gene ID: -
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b%2C subunit 3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 13961 bases
Position: chrKQ557212.1:4313564-4327524
Accession: ZDB-GENE-040426-2901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000018080	CPSF_A	PF03178.15	2.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000018309	-	2931	-	ENSXCOP00000018080	976 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013628's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013628	sf3b3	97	94.161	ENSG00000189091	SF3B3	100	96.774	Homo_sapiens
ENSXCOG00000013628	sf3b3	97	98.089	ENSAPOG00000006172	sf3b3	79	98.089	Acanthochromis_polyacanthus
ENSXCOG00000013628	sf3b3	97	93.968	ENSAMEG00000002187	SF3B3	77	93.968	Ailuropoda_melanoleuca
ENSXCOG00000013628	sf3b3	86	98.934	ENSACIG00000016487	sf3b3	78	98.934	Amphilophus_citrinellus
ENSXCOG00000013628	sf3b3	97	98.089	ENSAOCG00000007158	sf3b3	77	98.089	Amphiprion_ocellaris
ENSXCOG00000013628	sf3b3	97	98.089	ENSAPEG00000022786	sf3b3	77	98.089	Amphiprion_percula
ENSXCOG00000013628	sf3b3	97	98.301	ENSATEG00000013708	sf3b3	77	98.301	Anabas_testudineus
ENSXCOG00000013628	sf3b3	97	93.206	ENSAPLG00000004996	SF3B3	95	93.206	Anas_platyrhynchos
ENSXCOG00000013628	sf3b3	97	94.480	ENSACAG00000001817	SF3B3	77	94.480	Anolis_carolinensis
ENSXCOG00000013628	sf3b3	97	94.161	ENSANAG00000028001	SF3B3	77	94.161	Aotus_nancymaae
ENSXCOG00000013628	sf3b3	97	98.620	ENSACLG00000022555	sf3b3	79	98.620	Astatotilapia_calliptera
ENSXCOG00000013628	sf3b3	97	97.771	ENSAMXG00000003410	sf3b3	77	97.771	Astyanax_mexicanus
ENSXCOG00000013628	sf3b3	97	94.161	ENSBTAG00000010627	SF3B3	79	94.161	Bos_taurus
ENSXCOG00000013628	sf3b3	97	60.063	WBGene00019323	teg-4	77	60.063	Caenorhabditis_elegans
ENSXCOG00000013628	sf3b3	97	94.161	ENSCJAG00000014773	SF3B3	77	94.161	Callithrix_jacchus
ENSXCOG00000013628	sf3b3	97	94.268	ENSCAFG00000020151	SF3B3	77	94.268	Canis_familiaris
ENSXCOG00000013628	sf3b3	97	94.268	ENSCAFG00020020912	SF3B3	77	94.268	Canis_lupus_dingo
ENSXCOG00000013628	sf3b3	97	94.268	ENSCHIG00000019822	SF3B3	77	94.268	Capra_hircus
ENSXCOG00000013628	sf3b3	97	94.161	ENSTSYG00000007910	SF3B3	77	94.161	Carlito_syrichta
ENSXCOG00000013628	sf3b3	72	87.500	ENSCAPG00000001484	SF3B3	61	87.500	Cavia_aperea
ENSXCOG00000013628	sf3b3	97	92.463	ENSCPOG00000000586	SF3B3	77	92.463	Cavia_porcellus
ENSXCOG00000013628	sf3b3	97	94.161	ENSCCAG00000017736	SF3B3	77	94.161	Cebus_capucinus
ENSXCOG00000013628	sf3b3	97	94.161	ENSCATG00000036562	SF3B3	77	94.161	Cercocebus_atys
ENSXCOG00000013628	sf3b3	97	94.161	ENSCLAG00000003921	SF3B3	77	94.161	Chinchilla_lanigera
ENSXCOG00000013628	sf3b3	97	94.161	ENSCSAG00000004371	SF3B3	77	94.161	Chlorocebus_sabaeus
ENSXCOG00000013628	sf3b3	86	89.097	ENSCHOG00000001878	SF3B3	70	89.097	Choloepus_hoffmanni
ENSXCOG00000013628	sf3b3	97	94.055	ENSCPBG00000015853	SF3B3	77	94.055	Chrysemys_picta_bellii
ENSXCOG00000013628	sf3b3	97	80.806	ENSCING00000001342	-	77	80.806	Ciona_intestinalis
ENSXCOG00000013628	sf3b3	97	79.639	ENSCSAVG00000011454	-	82	79.639	Ciona_savignyi
ENSXCOG00000013628	sf3b3	97	94.161	ENSCANG00000042920	SF3B3	79	94.161	Colobus_angolensis_palliatus
ENSXCOG00000013628	sf3b3	97	94.055	ENSCGRG00001015908	Sf3b3	77	94.055	Cricetulus_griseus_chok1gshd
ENSXCOG00000013628	sf3b3	97	94.055	ENSCGRG00000010180	Sf3b3	77	94.055	Cricetulus_griseus_crigri
ENSXCOG00000013628	sf3b3	97	97.558	ENSCSEG00000014192	sf3b3	94	97.558	Cynoglossus_semilaevis
ENSXCOG00000013628	sf3b3	97	98.726	ENSCVAG00000010459	sf3b3	77	98.726	Cyprinodon_variegatus
ENSXCOG00000013628	sf3b3	97	96.815	ENSDARG00000103553	sf3b3	77	96.815	Danio_rerio
ENSXCOG00000013628	sf3b3	78	94.226	ENSDNOG00000043626	SF3B3	73	94.226	Dasypus_novemcinctus
ENSXCOG00000013628	sf3b3	97	94.161	ENSDORG00000014176	Sf3b3	77	94.161	Dipodomys_ordii
ENSXCOG00000013628	sf3b3	97	76.514	FBgn0035162	Sf3b3	78	76.514	Drosophila_melanogaster
ENSXCOG00000013628	sf3b3	76	95.161	ENSETEG00000002729	SF3B3	61	95.161	Echinops_telfairi
ENSXCOG00000013628	sf3b3	98	84.016	ENSEBUG00000006117	sf3b3	80	84.016	Eptatretus_burgeri
ENSXCOG00000013628	sf3b3	97	94.268	ENSEASG00005013376	SF3B3	77	94.268	Equus_asinus_asinus
ENSXCOG00000013628	sf3b3	97	94.268	ENSECAG00000014053	SF3B3	77	94.268	Equus_caballus
ENSXCOG00000013628	sf3b3	88	92.632	ENSEEUG00000015611	SF3B3	70	92.632	Erinaceus_europaeus
ENSXCOG00000013628	sf3b3	97	95.344	ENSELUG00000015417	sf3b3	95	88.783	Esox_lucius
ENSXCOG00000013628	sf3b3	97	94.268	ENSFCAG00000009487	SF3B3	77	94.268	Felis_catus
ENSXCOG00000013628	sf3b3	97	93.949	ENSFALG00000007372	SF3B3	77	93.949	Ficedula_albicollis
ENSXCOG00000013628	sf3b3	97	94.161	ENSFDAG00000002608	SF3B3	77	94.161	Fukomys_damarensis
ENSXCOG00000013628	sf3b3	97	99.363	ENSFHEG00000017824	sf3b3	77	99.363	Fundulus_heteroclitus
ENSXCOG00000013628	sf3b3	97	92.471	ENSGMOG00000008139	sf3b3	77	92.471	Gadus_morhua
ENSXCOG00000013628	sf3b3	97	94.161	ENSGALG00000002531	SF3B3	77	94.161	Gallus_gallus
ENSXCOG00000013628	sf3b3	97	99.469	ENSGAFG00000015206	sf3b3	94	99.469	Gambusia_affinis
ENSXCOG00000013628	sf3b3	97	97.667	ENSGACG00000002646	sf3b3	77	97.667	Gasterosteus_aculeatus
ENSXCOG00000013628	sf3b3	97	94.055	ENSGAGG00000006746	SF3B3	78	94.055	Gopherus_agassizii
ENSXCOG00000013628	sf3b3	97	94.161	ENSGGOG00000003246	SF3B3	77	94.161	Gorilla_gorilla
ENSXCOG00000013628	sf3b3	86	93.246	ENSHBUG00000005960	sf3b3	77	93.246	Haplochromis_burtoni
ENSXCOG00000013628	sf3b3	97	94.161	ENSHGLG00000010135	SF3B3	77	94.161	Heterocephalus_glaber_female
ENSXCOG00000013628	sf3b3	97	91.441	ENSHGLG00100011148	SF3B3	78	91.441	Heterocephalus_glaber_male
ENSXCOG00000013628	sf3b3	97	97.983	ENSHCOG00000011981	sf3b3	77	97.983	Hippocampus_comes
ENSXCOG00000013628	sf3b3	97	97.665	ENSIPUG00000020435	sf3b3	77	97.665	Ictalurus_punctatus
ENSXCOG00000013628	sf3b3	97	94.161	ENSSTOG00000007065	SF3B3	77	94.161	Ictidomys_tridecemlineatus
ENSXCOG00000013628	sf3b3	97	94.161	ENSJJAG00000003948	Sf3b3	77	94.161	Jaculus_jaculus
ENSXCOG00000013628	sf3b3	97	98.301	ENSKMAG00000004066	sf3b3	79	98.301	Kryptolebias_marmoratus
ENSXCOG00000013628	sf3b3	97	98.195	ENSLBEG00000018302	sf3b3	85	98.195	Labrus_bergylta
ENSXCOG00000013628	sf3b3	95	89.807	ENSLACG00000012501	SF3B3	77	89.807	Latimeria_chalumnae
ENSXCOG00000013628	sf3b3	97	97.243	ENSLOCG00000007566	sf3b3	77	97.243	Lepisosteus_oculatus
ENSXCOG00000013628	sf3b3	97	94.268	ENSLAFG00000012219	SF3B3	77	94.268	Loxodonta_africana
ENSXCOG00000013628	sf3b3	97	94.161	ENSMFAG00000045487	SF3B3	77	94.161	Macaca_fascicularis
ENSXCOG00000013628	sf3b3	97	94.161	ENSMMUG00000017812	SF3B3	77	94.161	Macaca_mulatta
ENSXCOG00000013628	sf3b3	97	94.161	ENSMNEG00000033385	SF3B3	77	94.161	Macaca_nemestrina
ENSXCOG00000013628	sf3b3	97	89.597	ENSMLEG00000043891	SF3B3	77	89.597	Mandrillus_leucophaeus
ENSXCOG00000013628	sf3b3	97	98.195	ENSMAMG00000016837	sf3b3	77	98.195	Mastacembelus_armatus
ENSXCOG00000013628	sf3b3	97	98.620	ENSMZEG00005010836	sf3b3	78	98.578	Maylandia_zebra
ENSXCOG00000013628	sf3b3	83	98.635	ENSMZEG00005026015	sf3b3	76	98.635	Maylandia_zebra
ENSXCOG00000013628	sf3b3	97	94.161	ENSMGAG00000001597	SF3B3	77	94.161	Meleagris_gallopavo
ENSXCOG00000013628	sf3b3	82	76.030	ENSMAUG00000013618	Sf3b3	75	76.404	Mesocricetus_auratus
ENSXCOG00000013628	sf3b3	97	92.797	ENSMICG00000001363	SF3B3	77	92.797	Microcebus_murinus
ENSXCOG00000013628	sf3b3	97	94.055	ENSMOCG00000006108	Sf3b3	77	94.055	Microtus_ochrogaster
ENSXCOG00000013628	sf3b3	83	98.635	ENSMMOG00000002598	sf3b3	75	98.635	Mola_mola
ENSXCOG00000013628	sf3b3	97	88.971	ENSMODG00000014363	SF3B3	77	88.971	Monodelphis_domestica
ENSXCOG00000013628	sf3b3	97	97.877	ENSMALG00000008014	sf3b3	77	97.877	Monopterus_albus
ENSXCOG00000013628	sf3b3	97	94.055	MGP_CAROLIEiJ_G0031563	Sf3b3	77	94.055	Mus_caroli
ENSXCOG00000013628	sf3b3	97	94.055	ENSMUSG00000033732	Sf3b3	77	94.055	Mus_musculus
ENSXCOG00000013628	sf3b3	97	94.055	MGP_SPRETEiJ_G0032681	Sf3b3	77	94.055	Mus_spretus
ENSXCOG00000013628	sf3b3	97	94.268	ENSMPUG00000010277	SF3B3	77	94.268	Mustela_putorius_furo
ENSXCOG00000013628	sf3b3	97	94.055	ENSMLUG00000014607	SF3B3	77	94.055	Myotis_lucifugus
ENSXCOG00000013628	sf3b3	97	94.161	ENSNGAG00000021903	Sf3b3	77	94.161	Nannospalax_galili
ENSXCOG00000013628	sf3b3	76	94.286	ENSNBRG00000007197	sf3b3	74	94.286	Neolamprologus_brichardi
ENSXCOG00000013628	sf3b3	97	92.259	ENSNLEG00000016127	SF3B3	77	92.259	Nomascus_leucogenys
ENSXCOG00000013628	sf3b3	87	88.740	ENSMEUG00000004479	SF3B3	71	88.740	Notamacropus_eugenii
ENSXCOG00000013628	sf3b3	94	90.196	ENSOPRG00000009847	SF3B3	77	90.196	Ochotona_princeps
ENSXCOG00000013628	sf3b3	97	94.161	ENSODEG00000014154	SF3B3	77	94.161	Octodon_degus
ENSXCOG00000013628	sf3b3	97	98.514	ENSONIG00000011198	sf3b3	77	98.514	Oreochromis_niloticus
ENSXCOG00000013628	sf3b3	97	94.374	ENSOANG00000001161	-	77	94.374	Ornithorhynchus_anatinus
ENSXCOG00000013628	sf3b3	97	91.614	ENSOCUG00000004139	SF3B3	77	91.614	Oryctolagus_cuniculus
ENSXCOG00000013628	sf3b3	97	97.983	ENSORLG00000013472	sf3b3	78	98.104	Oryzias_latipes
ENSXCOG00000013628	sf3b3	97	97.983	ENSORLG00020017473	sf3b3	78	98.104	Oryzias_latipes_hni
ENSXCOG00000013628	sf3b3	97	98.089	ENSORLG00015007710	sf3b3	78	98.223	Oryzias_latipes_hsok
ENSXCOG00000013628	sf3b3	97	97.983	ENSOMEG00000014483	sf3b3	77	97.983	Oryzias_melastigma
ENSXCOG00000013628	sf3b3	97	93.757	ENSOGAG00000016051	SF3B3	77	93.757	Otolemur_garnettii
ENSXCOG00000013628	sf3b3	97	93.968	ENSOARG00000004816	SF3B3	77	93.968	Ovis_aries
ENSXCOG00000013628	sf3b3	97	94.161	ENSPPAG00000026807	SF3B3	77	94.161	Pan_paniscus
ENSXCOG00000013628	sf3b3	97	94.268	ENSPPRG00000001686	SF3B3	77	94.268	Panthera_pardus
ENSXCOG00000013628	sf3b3	83	94.581	ENSPTIG00000020382	SF3B3	77	94.581	Panthera_tigris_altaica
ENSXCOG00000013628	sf3b3	97	94.161	ENSPTRG00000008308	SF3B3	77	94.161	Pan_troglodytes
ENSXCOG00000013628	sf3b3	97	94.161	ENSPANG00000024075	SF3B3	77	94.161	Papio_anubis
ENSXCOG00000013628	sf3b3	97	96.603	ENSPKIG00000002712	sf3b3	78	96.564	Paramormyrops_kingsleyae
ENSXCOG00000013628	sf3b3	83	94.458	ENSPSIG00000002232	SF3B3	75	94.458	Pelodiscus_sinensis
ENSXCOG00000013628	sf3b3	97	94.055	ENSPEMG00000008603	Sf3b3	77	94.055	Peromyscus_maniculatus_bairdii
ENSXCOG00000013628	sf3b3	97	91.295	ENSPMAG00000001793	sf3b3	77	91.295	Petromyzon_marinus
ENSXCOG00000013628	sf3b3	97	94.374	ENSPCIG00000014927	SF3B3	77	94.374	Phascolarctos_cinereus
ENSXCOG00000013628	sf3b3	97	99.788	ENSPFOG00000015516	sf3b3	77	99.788	Poecilia_formosa
ENSXCOG00000013628	sf3b3	97	99.788	ENSPLAG00000014330	sf3b3	93	99.788	Poecilia_latipinna
ENSXCOG00000013628	sf3b3	97	99.788	ENSPMEG00000019856	sf3b3	77	99.788	Poecilia_mexicana
ENSXCOG00000013628	sf3b3	97	99.469	ENSPREG00000019669	sf3b3	93	99.469	Poecilia_reticulata
ENSXCOG00000013628	sf3b3	91	94.149	ENSPPYG00000007539	SF3B3	76	94.149	Pongo_abelii
ENSXCOG00000013628	sf3b3	97	70.913	ENSPCAG00000002623	SF3B3	77	70.913	Procavia_capensis
ENSXCOG00000013628	sf3b3	77	96.262	ENSPCOG00000026582	SF3B3	73	96.262	Propithecus_coquereli
ENSXCOG00000013628	sf3b3	97	94.268	ENSPVAG00000000684	SF3B3	77	94.268	Pteropus_vampyrus
ENSXCOG00000013628	sf3b3	97	98.620	ENSPNYG00000003528	sf3b3	78	98.578	Pundamilia_nyererei
ENSXCOG00000013628	sf3b3	97	97.028	ENSPNAG00000015419	sf3b3	77	97.028	Pygocentrus_nattereri
ENSXCOG00000013628	sf3b3	97	94.055	ENSRNOG00000017724	Sf3b3	77	94.055	Rattus_norvegicus
ENSXCOG00000013628	sf3b3	97	94.161	ENSRBIG00000021904	SF3B3	77	94.161	Rhinopithecus_bieti
ENSXCOG00000013628	sf3b3	97	94.161	ENSRROG00000045703	SF3B3	77	94.161	Rhinopithecus_roxellana
ENSXCOG00000013628	sf3b3	97	94.161	ENSSBOG00000029156	SF3B3	77	94.161	Saimiri_boliviensis_boliviensis
ENSXCOG00000013628	sf3b3	97	94.374	ENSSHAG00000000372	SF3B3	77	94.374	Sarcophilus_harrisii
ENSXCOG00000013628	sf3b3	97	97.346	ENSSFOG00015012877	sf3b3	78	97.393	Scleropages_formosus
ENSXCOG00000013628	sf3b3	97	97.665	ENSSMAG00000014386	sf3b3	77	97.665	Scophthalmus_maximus
ENSXCOG00000013628	sf3b3	97	98.408	ENSSDUG00000021201	sf3b3	94	95.648	Seriola_dumerili
ENSXCOG00000013628	sf3b3	97	98.408	ENSSLDG00000017532	sf3b3	94	95.754	Seriola_lalandi_dorsalis
ENSXCOG00000013628	sf3b3	97	94.055	ENSSARG00000006917	SF3B3	77	94.055	Sorex_araneus
ENSXCOG00000013628	sf3b3	98	91.496	ENSSPUG00000006253	SF3B3	80	91.496	Sphenodon_punctatus
ENSXCOG00000013628	sf3b3	97	88.217	ENSSPAG00000003125	sf3b3	76	88.217	Stegastes_partitus
ENSXCOG00000013628	sf3b3	97	94.268	ENSSSCG00000025323	SF3B3	93	94.268	Sus_scrofa
ENSXCOG00000013628	sf3b3	97	94.161	ENSTGUG00000006082	SF3B3	77	94.161	Taeniopygia_guttata
ENSXCOG00000013628	sf3b3	97	97.771	ENSTNIG00000004857	sf3b3	87	97.771	Tetraodon_nigroviridis
ENSXCOG00000013628	sf3b3	95	77.957	ENSTBEG00000002946	SF3B3	82	77.957	Tupaia_belangeri
ENSXCOG00000013628	sf3b3	97	93.206	ENSTTRG00000005855	SF3B3	77	93.206	Tursiops_truncatus
ENSXCOG00000013628	sf3b3	97	94.268	ENSUAMG00000006780	SF3B3	77	94.268	Ursus_americanus
ENSXCOG00000013628	sf3b3	97	94.268	ENSUMAG00000017757	SF3B3	81	94.268	Ursus_maritimus
ENSXCOG00000013628	sf3b3	97	76.858	ENSVPAG00000003202	SF3B3	77	76.858	Vicugna_pacos
ENSXCOG00000013628	sf3b3	97	94.268	ENSVVUG00000017922	SF3B3	77	94.268	Vulpes_vulpes
ENSXCOG00000013628	sf3b3	97	94.161	ENSXETG00000032869	SF3B3	77	94.161	Xenopus_tropicalis
ENSXCOG00000013628	sf3b3	97	100.000	ENSXMAG00000006334	sf3b3	95	100.000	Xiphophorus_maculatus