EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000013706 (Gene tree)
Gene ID: -
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 6964 bases
Position: chrKQ557220.1:12258441-12265404
Accession: ZDB-GENE-050522-251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000018198	RNA_pol_I_A49	PF06870.12	4.1e-103	1	1
ENSXCOP00000018199	RNA_pol_I_A49	PF06870.12	1.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000018430	-	474	-	ENSXCOP00000018199	157 (aa)	-	-
ENSXCOT00000018429	-	1209	-	ENSXCOP00000018198	402 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013706's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013706	polr1e	97	42.998	ENSG00000137054	POLR1E	91	50.000	Homo_sapiens
ENSXCOG00000013706	polr1e	100	63.702	ENSAPOG00000012452	polr1e	100	63.702	Acanthochromis_polyacanthus
ENSXCOG00000013706	polr1e	99	39.696	ENSAMEG00000010193	POLR1E	95	39.696	Ailuropoda_melanoleuca
ENSXCOG00000013706	polr1e	100	64.720	ENSACIG00000009884	polr1e	99	70.419	Amphilophus_citrinellus
ENSXCOG00000013706	polr1e	100	70.192	ENSAOCG00000005665	polr1e	100	70.192	Amphiprion_ocellaris
ENSXCOG00000013706	polr1e	100	70.673	ENSAPEG00000020581	polr1e	100	70.673	Amphiprion_percula
ENSXCOG00000013706	polr1e	100	71.875	ENSATEG00000020609	polr1e	100	71.875	Anabas_testudineus
ENSXCOG00000013706	polr1e	80	37.403	ENSAPLG00000010340	POLR1E	100	37.662	Anas_platyrhynchos
ENSXCOG00000013706	polr1e	99	42.512	ENSANAG00000038046	POLR1E	98	42.512	Aotus_nancymaae
ENSXCOG00000013706	polr1e	100	69.952	ENSACLG00000013685	polr1e	99	69.952	Astatotilapia_calliptera
ENSXCOG00000013706	polr1e	99	53.140	ENSAMXG00000018181	polr1e	99	53.140	Astyanax_mexicanus
ENSXCOG00000013706	polr1e	98	45.833	ENSBTAG00000012243	POLR1E	97	45.833	Bos_taurus
ENSXCOG00000013706	polr1e	95	40.201	ENSCJAG00000010512	POLR1E	92	43.750	Callithrix_jacchus
ENSXCOG00000013706	polr1e	99	43.237	ENSCAFG00000002377	POLR1E	98	43.237	Canis_familiaris
ENSXCOG00000013706	polr1e	99	43.478	ENSCAFG00020017851	POLR1E	98	43.478	Canis_lupus_dingo
ENSXCOG00000013706	polr1e	98	45.343	ENSCHIG00000019479	POLR1E	97	45.343	Capra_hircus
ENSXCOG00000013706	polr1e	99	42.995	ENSTSYG00000002075	POLR1E	98	42.995	Carlito_syrichta
ENSXCOG00000013706	polr1e	70	41.724	ENSCAPG00000015653	POLR1E	99	41.724	Cavia_aperea
ENSXCOG00000013706	polr1e	98	44.608	ENSCPOG00000009965	POLR1E	97	44.608	Cavia_porcellus
ENSXCOG00000013706	polr1e	99	38.916	ENSCCAG00000029460	POLR1E	98	38.916	Cebus_capucinus
ENSXCOG00000013706	polr1e	94	52.679	ENSCATG00000031732	POLR1E	96	52.679	Cercocebus_atys
ENSXCOG00000013706	polr1e	86	45.856	ENSCLAG00000012701	POLR1E	95	45.856	Chinchilla_lanigera
ENSXCOG00000013706	polr1e	97	42.998	ENSCSAG00000010782	POLR1E	96	42.998	Chlorocebus_sabaeus
ENSXCOG00000013706	polr1e	95	37.594	ENSCHOG00000013024	POLR1E	82	37.594	Choloepus_hoffmanni
ENSXCOG00000013706	polr1e	99	44.153	ENSCPBG00000006923	POLR1E	99	44.630	Chrysemys_picta_bellii
ENSXCOG00000013706	polr1e	94	53.571	ENSCANG00000036112	POLR1E	96	53.571	Colobus_angolensis_palliatus
ENSXCOG00000013706	polr1e	99	41.928	ENSCGRG00001006197	Polr1e	95	41.928	Cricetulus_griseus_chok1gshd
ENSXCOG00000013706	polr1e	99	41.446	ENSCGRG00000006430	Polr1e	95	41.446	Cricetulus_griseus_crigri
ENSXCOG00000013706	polr1e	99	64.251	ENSCSEG00000005121	polr1e	99	64.251	Cynoglossus_semilaevis
ENSXCOG00000013706	polr1e	100	79.759	ENSCVAG00000019759	polr1e	100	79.759	Cyprinodon_variegatus
ENSXCOG00000013706	polr1e	97	55.198	ENSDARG00000006434	polr1e	100	53.976	Danio_rerio
ENSXCOG00000013706	polr1e	99	36.034	ENSDNOG00000010257	POLR1E	98	36.034	Dasypus_novemcinctus
ENSXCOG00000013706	polr1e	72	52.991	ENSDORG00000026463	-	88	55.652	Dipodomys_ordii
ENSXCOG00000013706	polr1e	82	40.688	ENSETEG00000018204	POLR1E	96	40.688	Echinops_telfairi
ENSXCOG00000013706	polr1e	59	47.541	ENSEBUG00000010635	-	95	30.530	Eptatretus_burgeri
ENSXCOG00000013706	polr1e	99	43.237	ENSEASG00005000675	POLR1E	98	43.237	Equus_asinus_asinus
ENSXCOG00000013706	polr1e	99	43.237	ENSECAG00000014669	POLR1E	98	43.237	Equus_caballus
ENSXCOG00000013706	polr1e	95	39.141	ENSEEUG00000011928	POLR1E	84	39.141	Erinaceus_europaeus
ENSXCOG00000013706	polr1e	99	62.560	ENSELUG00000008150	polr1e	99	62.560	Esox_lucius
ENSXCOG00000013706	polr1e	99	44.337	ENSFCAG00000013081	POLR1E	98	44.337	Felis_catus
ENSXCOG00000013706	polr1e	95	41.206	ENSFALG00000012950	POLR1E	99	41.206	Ficedula_albicollis
ENSXCOG00000013706	polr1e	98	45.742	ENSFDAG00000016917	POLR1E	97	45.742	Fukomys_damarensis
ENSXCOG00000013706	polr1e	100	78.846	ENSFHEG00000009801	polr1e	100	78.897	Fundulus_heteroclitus
ENSXCOG00000013706	polr1e	99	53.269	ENSGMOG00000003336	POLR1E	99	53.269	Gadus_morhua
ENSXCOG00000013706	polr1e	98	44.118	ENSGALG00000005395	POLR1E	98	44.118	Gallus_gallus
ENSXCOG00000013706	polr1e	100	86.779	ENSGAFG00000004850	polr1e	100	86.779	Gambusia_affinis
ENSXCOG00000013706	polr1e	100	65.155	ENSGACG00000016087	polr1e	100	65.155	Gasterosteus_aculeatus
ENSXCOG00000013706	polr1e	97	42.786	ENSGAGG00000001659	POLR1E	99	42.233	Gopherus_agassizii
ENSXCOG00000013706	polr1e	96	50.413	ENSGGOG00000001882	POLR1E	98	50.413	Gorilla_gorilla
ENSXCOG00000013706	polr1e	100	69.952	ENSHBUG00000002559	polr1e	99	69.952	Haplochromis_burtoni
ENSXCOG00000013706	polr1e	98	45.343	ENSHGLG00000002036	POLR1E	97	45.343	Heterocephalus_glaber_female
ENSXCOG00000013706	polr1e	98	45.588	ENSHGLG00100012784	POLR1E	97	45.588	Heterocephalus_glaber_male
ENSXCOG00000013706	polr1e	100	66.184	ENSHCOG00000002774	polr1e	100	66.425	Hippocampus_comes
ENSXCOG00000013706	polr1e	99	52.058	ENSIPUG00000003019	polr1e	99	52.058	Ictalurus_punctatus
ENSXCOG00000013706	polr1e	99	43.478	ENSSTOG00000009810	POLR1E	99	43.478	Ictidomys_tridecemlineatus
ENSXCOG00000013706	polr1e	98	44.660	ENSJJAG00000020731	Polr1e	93	44.660	Jaculus_jaculus
ENSXCOG00000013706	polr1e	100	73.798	ENSKMAG00000000046	polr1e	100	73.798	Kryptolebias_marmoratus
ENSXCOG00000013706	polr1e	99	69.157	ENSLBEG00000003104	polr1e	99	69.157	Labrus_bergylta
ENSXCOG00000013706	polr1e	86	48.077	ENSLACG00000003416	POLR1E	99	48.077	Latimeria_chalumnae
ENSXCOG00000013706	polr1e	99	50.120	ENSLOCG00000012859	polr1e	99	50.120	Lepisosteus_oculatus
ENSXCOG00000013706	polr1e	99	43.165	ENSLAFG00000012831	POLR1E	98	43.165	Loxodonta_africana
ENSXCOG00000013706	polr1e	94	52.679	ENSMFAG00000045465	POLR1E	96	52.679	Macaca_fascicularis
ENSXCOG00000013706	polr1e	94	52.679	ENSMMUG00000017892	POLR1E	96	52.679	Macaca_mulatta
ENSXCOG00000013706	polr1e	97	39.329	ENSMNEG00000040283	POLR1E	94	44.444	Macaca_nemestrina
ENSXCOG00000013706	polr1e	94	52.679	ENSMLEG00000031135	POLR1E	96	52.679	Mandrillus_leucophaeus
ENSXCOG00000013706	polr1e	99	70.602	ENSMAMG00000001260	polr1e	99	70.602	Mastacembelus_armatus
ENSXCOG00000013706	polr1e	100	69.952	ENSMZEG00005021536	polr1e	99	69.952	Maylandia_zebra
ENSXCOG00000013706	polr1e	98	42.892	ENSMAUG00000021044	Polr1e	93	42.892	Mesocricetus_auratus
ENSXCOG00000013706	polr1e	99	43.750	ENSMICG00000003673	POLR1E	98	43.750	Microcebus_murinus
ENSXCOG00000013706	polr1e	98	41.809	ENSMOCG00000012920	Polr1e	94	41.809	Microtus_ochrogaster
ENSXCOG00000013706	polr1e	100	69.305	ENSMMOG00000007391	polr1e	100	69.305	Mola_mola
ENSXCOG00000013706	polr1e	96	44.030	ENSMODG00000002884	POLR1E	98	44.030	Monodelphis_domestica
ENSXCOG00000013706	polr1e	100	72.596	ENSMALG00000002665	polr1e	99	72.596	Monopterus_albus
ENSXCOG00000013706	polr1e	99	41.304	MGP_CAROLIEiJ_G0025967	Polr1e	97	41.667	Mus_caroli
ENSXCOG00000013706	polr1e	99	41.928	ENSMUSG00000028318	Polr1e	97	42.317	Mus_musculus
ENSXCOG00000013706	polr1e	99	53.211	MGP_PahariEiJ_G0024114	Polr1e	97	43.142	Mus_pahari
ENSXCOG00000013706	polr1e	99	52.830	MGP_SPRETEiJ_G0026930	Polr1e	97	42.569	Mus_spretus
ENSXCOG00000013706	polr1e	99	36.989	ENSMPUG00000006040	POLR1E	98	36.989	Mustela_putorius_furo
ENSXCOG00000013706	polr1e	99	44.928	ENSMLUG00000012688	POLR1E	95	44.928	Myotis_lucifugus
ENSXCOG00000013706	polr1e	98	44.363	ENSNGAG00000002520	Polr1e	93	44.363	Nannospalax_galili
ENSXCOG00000013706	polr1e	100	70.433	ENSNBRG00000016822	polr1e	99	70.433	Neolamprologus_brichardi
ENSXCOG00000013706	polr1e	94	52.679	ENSNLEG00000003616	POLR1E	96	52.679	Nomascus_leucogenys
ENSXCOG00000013706	polr1e	73	50.228	ENSMEUG00000015372	-	79	50.228	Notamacropus_eugenii
ENSXCOG00000013706	polr1e	86	37.705	ENSOPRG00000014206	POLR1E	99	38.056	Ochotona_princeps
ENSXCOG00000013706	polr1e	98	45.588	ENSODEG00000014565	POLR1E	91	50.413	Octodon_degus
ENSXCOG00000013706	polr1e	100	70.673	ENSONIG00000008921	polr1e	99	70.673	Oreochromis_niloticus
ENSXCOG00000013706	polr1e	80	47.761	ENSOANG00000021091	-	90	52.000	Ornithorhynchus_anatinus
ENSXCOG00000013706	polr1e	99	43.165	ENSOCUG00000024773	POLR1E	98	43.165	Oryctolagus_cuniculus
ENSXCOG00000013706	polr1e	100	68.750	ENSORLG00000005143	polr1e	100	68.750	Oryzias_latipes
ENSXCOG00000013706	polr1e	95	67.454	ENSORLG00020007271	polr1e	100	67.454	Oryzias_latipes_hni
ENSXCOG00000013706	polr1e	100	68.510	ENSORLG00015000137	polr1e	100	68.510	Oryzias_latipes_hsok
ENSXCOG00000013706	polr1e	100	67.067	ENSOMEG00000013264	polr1e	98	67.067	Oryzias_melastigma
ENSXCOG00000013706	polr1e	99	42.754	ENSOGAG00000012981	POLR1E	96	42.754	Otolemur_garnettii
ENSXCOG00000013706	polr1e	98	45.588	ENSOARG00000011465	POLR1E	93	45.588	Ovis_aries
ENSXCOG00000013706	polr1e	94	52.679	ENSPPAG00000034566	POLR1E	96	52.679	Pan_paniscus
ENSXCOG00000013706	polr1e	99	44.096	ENSPPRG00000005649	POLR1E	98	44.096	Panthera_pardus
ENSXCOG00000013706	polr1e	99	44.337	ENSPTIG00000009774	POLR1E	98	44.337	Panthera_tigris_altaica
ENSXCOG00000013706	polr1e	94	52.679	ENSPTRG00000020944	POLR1E	96	52.679	Pan_troglodytes
ENSXCOG00000013706	polr1e	94	52.679	ENSPANG00000025563	POLR1E	96	52.679	Papio_anubis
ENSXCOG00000013706	polr1e	99	57.007	ENSPKIG00000003562	polr1e	99	57.007	Paramormyrops_kingsleyae
ENSXCOG00000013706	polr1e	98	43.521	ENSPSIG00000003274	POLR1E	95	44.282	Pelodiscus_sinensis
ENSXCOG00000013706	polr1e	95	64.341	ENSPMGG00000024169	polr1e	95	64.341	Periophthalmus_magnuspinnatus
ENSXCOG00000013706	polr1e	99	42.029	ENSPEMG00000019151	-	95	42.029	Peromyscus_maniculatus_bairdii
ENSXCOG00000013706	polr1e	99	36.935	ENSPEMG00000022300	-	94	36.935	Peromyscus_maniculatus_bairdii
ENSXCOG00000013706	polr1e	96	45.522	ENSPCIG00000014798	POLR1E	98	45.522	Phascolarctos_cinereus
ENSXCOG00000013706	polr1e	100	82.579	ENSPFOG00000019627	polr1e	99	82.579	Poecilia_formosa
ENSXCOG00000013706	polr1e	100	87.260	ENSPLAG00000022679	polr1e	100	87.260	Poecilia_latipinna
ENSXCOG00000013706	polr1e	86	87.222	ENSPMEG00000022123	polr1e	93	87.222	Poecilia_mexicana
ENSXCOG00000013706	polr1e	100	86.779	ENSPREG00000009470	polr1e	100	86.779	Poecilia_reticulata
ENSXCOG00000013706	polr1e	97	43.489	ENSPPYG00000019061	POLR1E	96	43.489	Pongo_abelii
ENSXCOG00000013706	polr1e	53	38.839	ENSPCAG00000004891	POLR1E	72	38.839	Procavia_capensis
ENSXCOG00000013706	polr1e	99	43.269	ENSPCOG00000027448	POLR1E	98	43.269	Propithecus_coquereli
ENSXCOG00000013706	polr1e	95	43.434	ENSPVAG00000007940	POLR1E	83	43.939	Pteropus_vampyrus
ENSXCOG00000013706	polr1e	100	70.192	ENSPNYG00000001032	polr1e	99	70.192	Pundamilia_nyererei
ENSXCOG00000013706	polr1e	100	54.327	ENSPNAG00000006987	polr1e	100	54.327	Pygocentrus_nattereri
ENSXCOG00000013706	polr1e	98	42.157	ENSRNOG00000012664	Polr1e	93	42.647	Rattus_norvegicus
ENSXCOG00000013706	polr1e	94	43.544	ENSRBIG00000034214	POLR1E	99	43.947	Rhinopithecus_bieti
ENSXCOG00000013706	polr1e	94	52.679	ENSRROG00000031986	POLR1E	96	52.679	Rhinopithecus_roxellana
ENSXCOG00000013706	polr1e	98	42.647	ENSSBOG00000021415	POLR1E	97	42.647	Saimiri_boliviensis_boliviensis
ENSXCOG00000013706	polr1e	82	43.478	ENSSHAG00000016084	POLR1E	95	43.478	Sarcophilus_harrisii
ENSXCOG00000013706	polr1e	99	56.115	ENSSFOG00015002293	polr1e	99	56.115	Scleropages_formosus
ENSXCOG00000013706	polr1e	99	71.256	ENSSMAG00000011672	polr1e	93	71.256	Scophthalmus_maximus
ENSXCOG00000013706	polr1e	100	71.394	ENSSDUG00000022279	polr1e	99	71.394	Seriola_dumerili
ENSXCOG00000013706	polr1e	100	71.394	ENSSLDG00000024918	polr1e	99	71.394	Seriola_lalandi_dorsalis
ENSXCOG00000013706	polr1e	56	38.793	ENSSARG00000009810	-	58	38.793	Sorex_araneus
ENSXCOG00000013706	polr1e	100	43.333	ENSSPUG00000009499	POLR1E	100	43.333	Sphenodon_punctatus
ENSXCOG00000013706	polr1e	100	71.566	ENSSPAG00000021240	polr1e	100	71.566	Stegastes_partitus
ENSXCOG00000013706	polr1e	99	43.720	ENSSSCG00000005347	POLR1E	98	43.720	Sus_scrofa
ENSXCOG00000013706	polr1e	95	38.170	ENSTGUG00000007169	POLR1E	100	38.170	Taeniopygia_guttata
ENSXCOG00000013706	polr1e	99	63.876	ENSTRUG00000020779	polr1e	99	63.397	Takifugu_rubripes
ENSXCOG00000013706	polr1e	99	66.587	ENSTNIG00000017812	polr1e	99	66.587	Tetraodon_nigroviridis
ENSXCOG00000013706	polr1e	95	44.949	ENSTBEG00000013786	POLR1E	84	44.949	Tupaia_belangeri
ENSXCOG00000013706	polr1e	95	43.860	ENSTTRG00000008294	POLR1E	84	43.860	Tursiops_truncatus
ENSXCOG00000013706	polr1e	99	44.203	ENSUAMG00000012474	POLR1E	98	45.706	Ursus_americanus
ENSXCOG00000013706	polr1e	99	44.203	ENSUMAG00000011496	POLR1E	98	44.203	Ursus_maritimus
ENSXCOG00000013706	polr1e	81	41.056	ENSVPAG00000009048	POLR1E	81	41.056	Vicugna_pacos
ENSXCOG00000013706	polr1e	98	43.873	ENSVVUG00000019954	POLR1E	97	43.873	Vulpes_vulpes
ENSXCOG00000013706	polr1e	99	42.381	ENSXETG00000006533	polr1e	99	42.381	Xenopus_tropicalis
ENSXCOG00000013706	polr1e	100	92.067	ENSXMAG00000012484	polr1e	100	92.067	Xiphophorus_maculatus