EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000013730 (Gene tree)
Gene ID
-
Gene Symbol
nocta
Alias
ccrn4la|im:7147903
Full Name
nocturnin a
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
4246 bases
Position
chrKQ557216.1:27188052-27192297
Accession
ZDB-GENE-050208-306
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000018231Exo_endo_phosPF03372.231.2e-2511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000018462-1293-ENSXCOP00000018231430 (aa)--
Gene Model
Click here to download ENSXCOG00000013730's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013730's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000013730nocta8560.270ENSXCOG00000012036noctb9960.811
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000013730nocta8662.933ENSG00000151014NOCT8462.599Homo_sapiens
ENSXCOG00000013730nocta8564.247ENSAPOG00000005454noctb9964.247Acanthochromis_polyacanthus
ENSXCOG00000013730nocta8878.866ENSAPOG00000016421nocta8578.866Acanthochromis_polyacanthus
ENSXCOG00000013730nocta8664.324ENSAMEG00000011061NOCT9464.324Ailuropoda_melanoleuca
ENSXCOG00000013730nocta7764.742ENSACIG00000013054noctb7864.742Amphilophus_citrinellus
ENSXCOG00000013730nocta8561.954ENSAOCG00000005363noctb9961.954Amphiprion_ocellaris
ENSXCOG00000013730nocta9077.582ENSAOCG00000014089nocta8878.086Amphiprion_ocellaris
ENSXCOG00000013730nocta9078.030ENSAPEG00000018097nocta8878.030Amphiprion_percula
ENSXCOG00000013730nocta8562.211ENSAPEG00000015529noctb9962.211Amphiprion_percula
ENSXCOG00000013730nocta8559.948ENSATEG00000022975noctb9960.465Anabas_testudineus
ENSXCOG00000013730nocta9175.500ENSATEG00000015612nocta9875.500Anabas_testudineus
ENSXCOG00000013730nocta8761.214ENSACAG00000001961NOCT9761.214Anolis_carolinensis
ENSXCOG00000013730nocta8762.992ENSANAG00000009701NOCT8662.663Aotus_nancymaae
ENSXCOG00000013730nocta8561.749ENSACLG00000010843noctb9661.749Astatotilapia_calliptera
ENSXCOG00000013730nocta8866.842ENSAMXG00000002383nocta8466.842Astyanax_mexicanus
ENSXCOG00000013730nocta8762.632ENSBTAG00000005998NOCT8562.632Bos_taurus
ENSXCOG00000013730nocta8762.992ENSCJAG00000003158NOCT8662.663Callithrix_jacchus
ENSXCOG00000013730nocta8762.834ENSCAFG00000003725NOCT10062.834Canis_familiaris
ENSXCOG00000013730nocta8762.434ENSCAFG00020020824NOCT8762.434Canis_lupus_dingo
ENSXCOG00000013730nocta8762.895ENSCHIG00000023612NOCT6963.158Capra_hircus
ENSXCOG00000013730nocta6669.858ENSTSYG00000032273NOCT8869.965Carlito_syrichta
ENSXCOG00000013730nocta8763.588ENSCAPG00000005005NOCT9463.588Cavia_aperea
ENSXCOG00000013730nocta8763.588ENSCPOG00000003827NOCT8463.588Cavia_porcellus
ENSXCOG00000013730nocta8763.325ENSCCAG00000022628NOCT8563.325Cebus_capucinus
ENSXCOG00000013730nocta8762.730ENSCATG00000041737-8562.730Cercocebus_atys
ENSXCOG00000013730nocta8746.400ENSCATG00000012533-9146.400Cercocebus_atys
ENSXCOG00000013730nocta8762.797ENSCLAG00000003384NOCT9062.797Chinchilla_lanigera
ENSXCOG00000013730nocta8762.797ENSCSAG00000003545NOCT10062.797Chlorocebus_sabaeus
ENSXCOG00000013730nocta8761.680ENSCHOG00000004354NOCT10061.680Choloepus_hoffmanni
ENSXCOG00000013730nocta8762.234ENSCPBG00000027624NOCT7562.234Chrysemys_picta_bellii
ENSXCOG00000013730nocta8752.231ENSCANG00000039017-9452.231Colobus_angolensis_palliatus
ENSXCOG00000013730nocta8762.467ENSCANG00000031969-8562.467Colobus_angolensis_palliatus
ENSXCOG00000013730nocta8763.369ENSCGRG00001021050Noct8563.369Cricetulus_griseus_chok1gshd
ENSXCOG00000013730nocta8763.369ENSCGRG00000014052Noct9563.369Cricetulus_griseus_crigri
ENSXCOG00000013730nocta7764.865ENSCSEG00000014449noctb9760.428Cynoglossus_semilaevis
ENSXCOG00000013730nocta8761.299ENSCVAG00000001093noctb9961.299Cyprinodon_variegatus
ENSXCOG00000013730nocta8877.003ENSCVAG00000001857nocta8877.600Cyprinodon_variegatus
ENSXCOG00000013730nocta8766.053ENSDARG00000077726nocta8766.053Danio_rerio
ENSXCOG00000013730nocta8563.200ENSDARG00000078525noctb9963.200Danio_rerio
ENSXCOG00000013730nocta8763.298ENSDNOG00000036912NOCT8563.298Dasypus_novemcinctus
ENSXCOG00000013730nocta8763.158ENSDORG00000000869Noct10063.061Dipodomys_ordii
ENSXCOG00000013730nocta6744.984FBgn0261808cu7244.984Drosophila_melanogaster
ENSXCOG00000013730nocta8762.730ENSEASG00005007871NOCT8562.730Equus_asinus_asinus
ENSXCOG00000013730nocta9061.772ENSECAG00000022676NOCT9461.772Equus_caballus
ENSXCOG00000013730nocta6472.202ENSEEUG00000013650-9972.202Erinaceus_europaeus
ENSXCOG00000013730nocta5673.333ENSEEUG00000010558-9973.333Erinaceus_europaeus
ENSXCOG00000013730nocta8663.200ENSELUG00000011415noctb8763.200Esox_lucius
ENSXCOG00000013730nocta9466.744ENSELUG00000002538nocta9873.442Esox_lucius
ENSXCOG00000013730nocta8762.730ENSFCAG00000030026NOCT8662.402Felis_catus
ENSXCOG00000013730nocta8763.102ENSFALG00000004876NOCT10063.102Ficedula_albicollis
ENSXCOG00000013730nocta6668.905ENSFDAG00000018163NOCT10068.905Fukomys_damarensis
ENSXCOG00000013730nocta8782.275ENSFHEG00000005067nocta8682.058Fundulus_heteroclitus
ENSXCOG00000013730nocta8558.763ENSFHEG00000013623noctb9958.763Fundulus_heteroclitus
ENSXCOG00000013730nocta8761.702ENSGALG00000032957NOCT9561.702Gallus_gallus
ENSXCOG00000013730nocta9292.405ENSGAFG00000019587nocta8992.405Gambusia_affinis
ENSXCOG00000013730nocta8559.115ENSGAFG00000015232noctb9959.375Gambusia_affinis
ENSXCOG00000013730nocta8763.102ENSGAGG00000004412NOCT10063.102Gopherus_agassizii
ENSXCOG00000013730nocta7067.550ENSGGOG00000028610-8570.318Gorilla_gorilla
ENSXCOG00000013730nocta7665.644ENSHBUG00000001687noctb8865.644Haplochromis_burtoni
ENSXCOG00000013730nocta8763.852ENSHGLG00000019383NOCT9063.852Heterocephalus_glaber_female
ENSXCOG00000013730nocta8863.542ENSHGLG00100012584NOCT9863.542Heterocephalus_glaber_male
ENSXCOG00000013730nocta8675.269ENSHCOG00000005299nocta8575.269Hippocampus_comes
ENSXCOG00000013730nocta8560.000ENSHCOG00000013999noctb9960.000Hippocampus_comes
ENSXCOG00000013730nocta8763.904ENSIPUG00000017932Ccrn4l8463.904Ictalurus_punctatus
ENSXCOG00000013730nocta8762.992ENSSTOG00000014818NOCT10062.992Ictidomys_tridecemlineatus
ENSXCOG00000013730nocta8764.362ENSJJAG00000019776Noct8564.362Jaculus_jaculus
ENSXCOG00000013730nocta8659.690ENSKMAG00000019996noctb8159.690Kryptolebias_marmoratus
ENSXCOG00000013730nocta8778.646ENSKMAG00000001493nocta8678.646Kryptolebias_marmoratus
ENSXCOG00000013730nocta8552.575ENSLBEG00000021526-9752.575Labrus_bergylta
ENSXCOG00000013730nocta8761.697ENSLBEG00000017977noctb9961.780Labrus_bergylta
ENSXCOG00000013730nocta9376.471ENSLBEG00000024022nocta8479.221Labrus_bergylta
ENSXCOG00000013730nocta8766.488ENSLACG00000015874NOCT8266.756Latimeria_chalumnae
ENSXCOG00000013730nocta9362.907ENSLOCG00000010593nocta8962.907Lepisosteus_oculatus
ENSXCOG00000013730nocta8763.830ENSLAFG00000017184NOCT9963.830Loxodonta_africana
ENSXCOG00000013730nocta8752.394ENSMFAG00000045037-9152.394Macaca_fascicularis
ENSXCOG00000013730nocta8762.730ENSMFAG00000002713-8562.730Macaca_fascicularis
ENSXCOG00000013730nocta8762.797ENSMMUG00000004983-10062.797Macaca_mulatta
ENSXCOG00000013730nocta8754.278ENSMMUG00000030791-9254.278Macaca_mulatta
ENSXCOG00000013730nocta8762.730ENSMNEG00000042407-8562.730Macaca_nemestrina
ENSXCOG00000013730nocta8746.419ENSMNEG00000007123-9246.419Macaca_nemestrina
ENSXCOG00000013730nocta8762.730ENSMLEG00000040699-8562.730Mandrillus_leucophaeus
ENSXCOG00000013730nocta8746.667ENSMLEG00000029801-10046.667Mandrillus_leucophaeus
ENSXCOG00000013730nocta8777.143ENSMAMG00000002501nocta8877.143Mastacembelus_armatus
ENSXCOG00000013730nocta8759.241ENSMAMG00000006732noctb9960.506Mastacembelus_armatus
ENSXCOG00000013730nocta8560.052ENSMZEG00005011616noctb9760.052Maylandia_zebra
ENSXCOG00000013730nocta8761.968ENSMGAG00000002778NOCT9561.968Meleagris_gallopavo
ENSXCOG00000013730nocta8763.904ENSMAUG00000013688Noct10063.904Mesocricetus_auratus
ENSXCOG00000013730nocta8762.797ENSMICG00000046478NOCT10062.797Microcebus_murinus
ENSXCOG00000013730nocta8762.299ENSMOCG00000013676Noct8462.299Microtus_ochrogaster
ENSXCOG00000013730nocta8877.041ENSMMOG00000001406nocta9877.296Mola_mola
ENSXCOG00000013730nocta8558.424ENSMMOG00000006622noctb9958.424Mola_mola
ENSXCOG00000013730nocta8763.298ENSMODG00000000087NOCT8163.298Monodelphis_domestica
ENSXCOG00000013730nocta8676.240ENSMALG00000000329nocta8176.762Monopterus_albus
ENSXCOG00000013730nocta8660.858ENSMALG00000021977noctb9960.858Monopterus_albus
ENSXCOG00000013730nocta8763.904MGP_CAROLIEiJ_G0024971Noct8563.904Mus_caroli
ENSXCOG00000013730nocta8763.904ENSMUSG00000023087Noct10063.904Mus_musculus
ENSXCOG00000013730nocta8763.904MGP_PahariEiJ_G0026412Noct8563.904Mus_pahari
ENSXCOG00000013730nocta8763.904MGP_SPRETEiJ_G0025906Noct8563.904Mus_spretus
ENSXCOG00000013730nocta8762.797ENSMPUG00000016137NOCT10062.797Mustela_putorius_furo
ENSXCOG00000013730nocta8762.105ENSMLUG00000009023NOCT9962.105Myotis_lucifugus
ENSXCOG00000013730nocta8763.636ENSNGAG00000010135Noct10063.636Nannospalax_galili
ENSXCOG00000013730nocta8772.414ENSNBRG00000017964noctb9172.414Neolamprologus_brichardi
ENSXCOG00000013730nocta8762.632ENSNLEG00000014018NOCT9962.698Nomascus_leucogenys
ENSXCOG00000013730nocta8761.436ENSMEUG00000009500NOCT10061.436Notamacropus_eugenii
ENSXCOG00000013730nocta8764.171ENSOPRG00000003306NOCT8564.171Ochotona_princeps
ENSXCOG00000013730nocta8763.325ENSODEG00000003057NOCT8563.325Octodon_degus
ENSXCOG00000013730nocta8561.789ENSONIG00000003358noctb9959.791Oreochromis_niloticus
ENSXCOG00000013730nocta9260.099ENSOANG00000013761NOCT8960.099Ornithorhynchus_anatinus
ENSXCOG00000013730nocta8763.564ENSOCUG00000005465NOCT8663.564Oryctolagus_cuniculus
ENSXCOG00000013730nocta8661.828ENSORLG00000002100noctb8861.828Oryzias_latipes
ENSXCOG00000013730nocta8562.162ENSORLG00020013826noctb9962.162Oryzias_latipes_hni
ENSXCOG00000013730nocta8661.039ENSORLG00015013405noctb9261.039Oryzias_latipes_hsok
ENSXCOG00000013730nocta8874.339ENSORLG00015019270nocta8774.339Oryzias_latipes_hsok
ENSXCOG00000013730nocta8676.882ENSOMEG00000010743nocta8676.882Oryzias_melastigma
ENSXCOG00000013730nocta8663.957ENSOMEG00000021625noctb9163.957Oryzias_melastigma
ENSXCOG00000013730nocta8763.102ENSOGAG00000008532NOCT8563.102Otolemur_garnettii
ENSXCOG00000013730nocta8961.538ENSOARG00000014103NOCT9261.538Ovis_aries
ENSXCOG00000013730nocta8762.632ENSPPAG00000042856NOCT9962.698Pan_paniscus
ENSXCOG00000013730nocta8762.730ENSPPRG00000009488NOCT8662.402Panthera_pardus
ENSXCOG00000013730nocta8762.797ENSPTIG00000008672NOCT10062.797Panthera_tigris_altaica
ENSXCOG00000013730nocta8762.632ENSPTRG00000016448NOCT9962.698Pan_troglodytes
ENSXCOG00000013730nocta8762.730ENSPANG00000029213NOCT8562.730Papio_anubis
ENSXCOG00000013730nocta8759.946ENSPKIG00000013368NOCT10059.946Paramormyrops_kingsleyae
ENSXCOG00000013730nocta8767.473ENSPKIG00000022066nocta9562.118Paramormyrops_kingsleyae
ENSXCOG00000013730nocta8762.500ENSPSIG00000010338NOCT7462.500Pelodiscus_sinensis
ENSXCOG00000013730nocta8560.054ENSPMGG00000019525noctb9960.054Periophthalmus_magnuspinnatus
ENSXCOG00000013730nocta8573.425ENSPMGG00000004558nocta8673.425Periophthalmus_magnuspinnatus
ENSXCOG00000013730nocta8763.271ENSPEMG00000016096Noct10063.271Peromyscus_maniculatus_bairdii
ENSXCOG00000013730nocta7353.481ENSPMAG00000002990nocta8353.481Petromyzon_marinus
ENSXCOG00000013730nocta8762.667ENSPCIG00000027121NOCT8062.933Phascolarctos_cinereus
ENSXCOG00000013730nocta8757.761ENSPFOG00000015717noctb9958.290Poecilia_formosa
ENSXCOG00000013730nocta8794.681ENSPFOG00000004800nocta8990.201Poecilia_formosa
ENSXCOG00000013730nocta8795.430ENSPLAG00000004749nocta10095.430Poecilia_latipinna
ENSXCOG00000013730nocta8558.031ENSPLAG00000016228noctb9958.290Poecilia_latipinna
ENSXCOG00000013730nocta8894.211ENSPMEG00000008265nocta9294.211Poecilia_mexicana
ENSXCOG00000013730nocta8557.772ENSPMEG00000019690noctb9958.031Poecilia_mexicana
ENSXCOG00000013730nocta8558.031ENSPREG00000001623noctb9958.290Poecilia_reticulata
ENSXCOG00000013730nocta9091.774ENSPREG00000006876nocta8990.201Poecilia_reticulata
ENSXCOG00000013730nocta8762.632ENSPPYG00000015067NOCT8562.632Pongo_abelii
ENSXCOG00000013730nocta6669.965ENSPCAG00000016793NOCT6469.965Procavia_capensis
ENSXCOG00000013730nocta8763.517ENSPCOG00000013805NOCT8463.517Propithecus_coquereli
ENSXCOG00000013730nocta8761.880ENSPVAG00000017841NOCT8661.880Pteropus_vampyrus
ENSXCOG00000013730nocta8561.475ENSPNYG00000003447noctb9661.475Pundamilia_nyererei
ENSXCOG00000013730nocta8768.085ENSPNAG00000029426nocta8368.085Pygocentrus_nattereri
ENSXCOG00000013730nocta8764.000ENSRNOG00000010799Noct8664.000Rattus_norvegicus
ENSXCOG00000013730nocta8762.467ENSRBIG00000032388-8562.467Rhinopithecus_bieti
ENSXCOG00000013730nocta8749.344ENSRBIG00000040138-8549.344Rhinopithecus_bieti
ENSXCOG00000013730nocta8756.168ENSRROG00000043125-9456.168Rhinopithecus_roxellana
ENSXCOG00000013730nocta8762.467ENSRROG00000032107-8562.467Rhinopithecus_roxellana
ENSXCOG00000013730nocta8762.992ENSSBOG00000022743NOCT9662.992Saimiri_boliviensis_boliviensis
ENSXCOG00000013730nocta8762.766ENSSHAG00000004440NOCT9362.766Sarcophilus_harrisii
ENSXCOG00000013730nocta8863.061ENSSFOG00015019938noctb9963.061Scleropages_formosus
ENSXCOG00000013730nocta8966.062ENSSFOG00015024047NOCT9666.062Scleropages_formosus
ENSXCOG00000013730nocta8762.565ENSSMAG00000012233noctb9062.565Scophthalmus_maximus
ENSXCOG00000013730nocta8777.662ENSSMAG00000015100nocta8477.662Scophthalmus_maximus
ENSXCOG00000013730nocta8781.266ENSSDUG00000000870nocta8581.266Seriola_dumerili
ENSXCOG00000013730nocta8561.417ENSSDUG00000019799noctb9962.133Seriola_dumerili
ENSXCOG00000013730nocta8780.739ENSSLDG00000007584nocta8580.739Seriola_lalandi_dorsalis
ENSXCOG00000013730nocta8661.538ENSSLDG00000008012noctb9661.538Seriola_lalandi_dorsalis
ENSXCOG00000013730nocta8649.730ENSSARG00000008892NOCT9949.730Sorex_araneus
ENSXCOG00000013730nocta8761.968ENSSPUG00000008160NOCT9261.968Sphenodon_punctatus
ENSXCOG00000013730nocta9077.500ENSSPAG00000023537nocta9177.750Stegastes_partitus
ENSXCOG00000013730nocta8564.324ENSSPAG00000010999noctb9964.324Stegastes_partitus
ENSXCOG00000013730nocta8663.807ENSSSCG00000024596NOCT9963.859Sus_scrofa
ENSXCOG00000013730nocta8762.234ENSTGUG00000002465-9962.234Taeniopygia_guttata
ENSXCOG00000013730nocta8762.234ENSTGUG00000014883-9962.234Taeniopygia_guttata
ENSXCOG00000013730nocta8562.432ENSTRUG00000014977noctb10062.432Takifugu_rubripes
ENSXCOG00000013730nocta8976.864ENSTRUG00000004981nocta9376.864Takifugu_rubripes
ENSXCOG00000013730nocta7762.651ENSTNIG00000012346noctb9762.651Tetraodon_nigroviridis
ENSXCOG00000013730nocta8775.462ENSTNIG00000014249nocta9975.462Tetraodon_nigroviridis
ENSXCOG00000013730nocta6670.318ENSTBEG00000009092NOCT7570.318Tupaia_belangeri
ENSXCOG00000013730nocta5469.718ENSTTRG00000013558NOCT5969.718Tursiops_truncatus
ENSXCOG00000013730nocta8563.315ENSUAMG00000011467NOCT8363.315Ursus_americanus
ENSXCOG00000013730nocta8563.315ENSUMAG00000014943NOCT9863.315Ursus_maritimus
ENSXCOG00000013730nocta8960.309ENSVPAG00000003667NOCT8760.309Vicugna_pacos
ENSXCOG00000013730nocta8862.467ENSVVUG00000021461NOCT10063.369Vulpes_vulpes
ENSXCOG00000013730nocta8763.852ENSXETG00000016899noct8163.852Xenopus_tropicalis
ENSXCOG00000013730nocta8558.549ENSXMAG00000017762noctb9958.549Xiphophorus_maculatus
ENSXCOG00000013730nocta9293.719ENSXMAG00000029143NOCT9197.638Xiphophorus_maculatus

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