EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000013837 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3602 bases
Position: chrKQ557209.1:8214848-8218449
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000018376	PARP	PF00644.20	2.6e-29	1	1
ENSXCOP00000018375	PARP	PF00644.20	3e-29	1	1
ENSXCOP00000018373	PARP	PF00644.20	3.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000018607	-	1653	-	ENSXCOP00000018375	550 (aa)	-	-
ENSXCOT00000018605	-	1740	-	ENSXCOP00000018373	579 (aa)	-	-
ENSXCOT00000018608	-	1578	-	ENSXCOP00000018376	525 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013837's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000013837	-	64	30.294	ENSXCOG00000003512	-	50	30.294
ENSXCOG00000013837	-	67	32.671	ENSXCOG00000000447	TIPARP	64	32.671

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013837	-	71	39.906	ENSG00000163659	TIPARP	96	31.373	Homo_sapiens
ENSXCOG00000013837	-	67	41.270	ENSAPOG00000020007	TIPARP	63	31.947	Acanthochromis_polyacanthus
ENSXCOG00000013837	-	67	38.528	ENSAMEG00000003118	TIPARP	67	31.429	Ailuropoda_melanoleuca
ENSXCOG00000013837	-	67	41.270	ENSACIG00000012575	TIPARP	63	33.494	Amphilophus_citrinellus
ENSXCOG00000013837	-	70	56.250	ENSACIG00000003039	-	94	56.250	Amphilophus_citrinellus
ENSXCOG00000013837	-	64	61.905	ENSAOCG00000012493	-	88	61.905	Amphiprion_ocellaris
ENSXCOG00000013837	-	67	41.270	ENSAOCG00000003328	TIPARP	63	31.878	Amphiprion_ocellaris
ENSXCOG00000013837	-	67	41.270	ENSAPEG00000020094	TIPARP	63	31.878	Amphiprion_percula
ENSXCOG00000013837	-	81	57.895	ENSAPEG00000020727	-	93	57.895	Amphiprion_percula
ENSXCOG00000013837	-	67	41.270	ENSATEG00000002945	TIPARP	63	31.947	Anabas_testudineus
ENSXCOG00000013837	-	73	30.667	ENSAPLG00000010788	TIPARP	66	30.889	Anas_platyrhynchos
ENSXCOG00000013837	-	73	31.264	ENSACAG00000001488	TIPARP	68	31.473	Anolis_carolinensis
ENSXCOG00000013837	-	80	30.584	ENSANAG00000036588	TIPARP	75	30.584	Aotus_nancymaae
ENSXCOG00000013837	-	67	41.270	ENSACLG00000003294	TIPARP	53	41.270	Astatotilapia_calliptera
ENSXCOG00000013837	-	99	61.826	ENSACLG00000019033	-	88	61.826	Astatotilapia_calliptera
ENSXCOG00000013837	-	73	31.429	ENSBTAG00000012120	TIPARP	68	31.868	Bos_taurus
ENSXCOG00000013837	-	71	39.437	ENSCJAG00000004657	TIPARP	62	39.437	Callithrix_jacchus
ENSXCOG00000013837	-	73	31.209	ENSCAFG00000008875	TIPARP	67	31.429	Canis_familiaris
ENSXCOG00000013837	-	73	31.209	ENSCAFG00020005619	TIPARP	67	31.429	Canis_lupus_dingo
ENSXCOG00000013837	-	71	39.906	ENSCHIG00000018721	TIPARP	62	39.906	Capra_hircus
ENSXCOG00000013837	-	81	39.906	ENSTSYG00000009874	TIPARP	74	39.906	Carlito_syrichta
ENSXCOG00000013837	-	74	32.080	ENSCAPG00000014614	TIPARP	93	32.080	Cavia_aperea
ENSXCOG00000013837	-	73	31.429	ENSCPOG00000000345	TIPARP	67	31.868	Cavia_porcellus
ENSXCOG00000013837	-	80	30.584	ENSCCAG00000029051	TIPARP	75	30.584	Cebus_capucinus
ENSXCOG00000013837	-	71	39.906	ENSCATG00000030375	TIPARP	75	30.178	Cercocebus_atys
ENSXCOG00000013837	-	71	39.906	ENSCLAG00000002423	TIPARP	75	30.375	Chinchilla_lanigera
ENSXCOG00000013837	-	71	39.906	ENSCSAG00000012060	TIPARP	75	30.375	Chlorocebus_sabaeus
ENSXCOG00000013837	-	67	36.480	ENSCPBG00000022321	-	76	38.095	Chrysemys_picta_bellii
ENSXCOG00000013837	-	63	40.476	ENSCPBG00000018420	TIPARP	67	31.111	Chrysemys_picta_bellii
ENSXCOG00000013837	-	71	39.906	ENSCANG00000031967	TIPARP	75	30.178	Colobus_angolensis_palliatus
ENSXCOG00000013837	-	71	39.906	ENSCGRG00001011123	Tiparp	75	30.435	Cricetulus_griseus_chok1gshd
ENSXCOG00000013837	-	71	39.906	ENSCGRG00000002020	Tiparp	75	30.435	Cricetulus_griseus_crigri
ENSXCOG00000013837	-	67	39.683	ENSCSEG00000001795	TIPARP	71	31.223	Cynoglossus_semilaevis
ENSXCOG00000013837	-	99	42.925	ENSCSEG00000007641	-	100	43.195	Cynoglossus_semilaevis
ENSXCOG00000013837	-	68	43.284	ENSCVAG00000011906	TIPARP	66	32.671	Cyprinodon_variegatus
ENSXCOG00000013837	-	67	42.857	ENSDARG00000061841	tiparp	71	32.063	Danio_rerio
ENSXCOG00000013837	-	71	39.720	ENSDNOG00000006676	TIPARP	74	30.315	Dasypus_novemcinctus
ENSXCOG00000013837	-	73	31.306	ENSDORG00000013554	Tiparp	67	32.088	Dipodomys_ordii
ENSXCOG00000013837	-	68	34.660	ENSEBUG00000009796	TIPARP	91	34.670	Eptatretus_burgeri
ENSXCOG00000013837	-	71	39.906	ENSEASG00005012401	TIPARP	75	30.375	Equus_asinus_asinus
ENSXCOG00000013837	-	71	39.906	ENSECAG00000024048	TIPARP	74	30.375	Equus_caballus
ENSXCOG00000013837	-	72	30.968	ENSEEUG00000004395	TIPARP	69	30.968	Erinaceus_europaeus
ENSXCOG00000013837	-	67	32.282	ENSELUG00000008647	TIPARP	60	32.282	Esox_lucius
ENSXCOG00000013837	-	73	31.685	ENSFCAG00000013314	TIPARP	67	31.868	Felis_catus
ENSXCOG00000013837	-	73	31.111	ENSFALG00000004781	TIPARP	68	31.111	Ficedula_albicollis
ENSXCOG00000013837	-	71	39.906	ENSFDAG00000008747	TIPARP	62	39.906	Fukomys_damarensis
ENSXCOG00000013837	-	68	40.299	ENSFHEG00000001493	TIPARP	65	32.962	Fundulus_heteroclitus
ENSXCOG00000013837	-	54	34.564	ENSGMOG00000009093	TIPARP	97	30.663	Gadus_morhua
ENSXCOG00000013837	-	73	31.486	ENSGALG00000010256	TIPARP	67	31.264	Gallus_gallus
ENSXCOG00000013837	-	100	92.373	ENSGAFG00000016878	-	100	83.657	Gambusia_affinis
ENSXCOG00000013837	-	69	30.889	ENSGAFG00000002709	TIPARP	64	32.450	Gambusia_affinis
ENSXCOG00000013837	-	55	34.967	ENSGACG00000007095	TIPARP	99	32.507	Gasterosteus_aculeatus
ENSXCOG00000013837	-	67	36.272	ENSGAGG00000018429	-	76	36.829	Gopherus_agassizii
ENSXCOG00000013837	-	63	40.476	ENSGAGG00000012968	TIPARP	67	31.111	Gopherus_agassizii
ENSXCOG00000013837	-	71	39.906	ENSGGOG00000026270	TIPARP	75	30.178	Gorilla_gorilla
ENSXCOG00000013837	-	99	61.826	ENSHBUG00000011412	-	88	61.826	Haplochromis_burtoni
ENSXCOG00000013837	-	67	41.270	ENSHBUG00000001162	TIPARP	53	41.270	Haplochromis_burtoni
ENSXCOG00000013837	-	74	31.398	ENSHGLG00000010960	TIPARP	69	31.828	Heterocephalus_glaber_female
ENSXCOG00000013837	-	74	30.323	ENSHGLG00000016026	-	73	30.323	Heterocephalus_glaber_female
ENSXCOG00000013837	-	74	30.323	ENSHGLG00100007196	-	73	30.323	Heterocephalus_glaber_male
ENSXCOG00000013837	-	74	31.398	ENSHGLG00100012625	-	69	31.828	Heterocephalus_glaber_male
ENSXCOG00000013837	-	68	31.166	ENSHCOG00000011891	TIPARP	64	32.438	Hippocampus_comes
ENSXCOG00000013837	-	67	44.444	ENSIPUG00000015335	tiparp	69	31.603	Ictalurus_punctatus
ENSXCOG00000013837	-	80	30.584	ENSSTOG00000027682	TIPARP	73	30.584	Ictidomys_tridecemlineatus
ENSXCOG00000013837	-	80	30.584	ENSJJAG00000014369	Tiparp	75	30.584	Jaculus_jaculus
ENSXCOG00000013837	-	67	39.683	ENSKMAG00000020703	TIPARP	62	32.080	Kryptolebias_marmoratus
ENSXCOG00000013837	-	100	45.073	ENSKMAG00000011655	-	98	45.073	Kryptolebias_marmoratus
ENSXCOG00000013837	-	98	52.495	ENSLBEG00000025908	-	93	52.727	Labrus_bergylta
ENSXCOG00000013837	-	67	41.270	ENSLBEG00000011510	TIPARP	68	33.111	Labrus_bergylta
ENSXCOG00000013837	-	69	37.273	ENSLACG00000011215	TIPARP	65	33.641	Latimeria_chalumnae
ENSXCOG00000013837	-	68	53.333	ENSLACG00000018517	-	86	53.333	Latimeria_chalumnae
ENSXCOG00000013837	-	68	40.777	ENSLACG00000015620	-	98	37.327	Latimeria_chalumnae
ENSXCOG00000013837	-	64	43.284	ENSLACG00000008813	-	75	43.284	Latimeria_chalumnae
ENSXCOG00000013837	-	59	46.269	ENSLOCG00000013687	-	99	33.413	Lepisosteus_oculatus
ENSXCOG00000013837	-	79	43.750	ENSLOCG00000016551	-	88	44.615	Lepisosteus_oculatus
ENSXCOG00000013837	-	69	31.193	ENSLOCG00000003293	TIPARP	66	33.182	Lepisosteus_oculatus
ENSXCOG00000013837	-	74	41.935	ENSLOCG00000005034	-	71	41.935	Lepisosteus_oculatus
ENSXCOG00000013837	-	71	39.906	ENSLAFG00000008210	TIPARP	62	39.906	Loxodonta_africana
ENSXCOG00000013837	-	71	39.906	ENSMFAG00000040611	TIPARP	75	30.178	Macaca_fascicularis
ENSXCOG00000013837	-	71	39.906	ENSMMUG00000000366	TIPARP	75	30.178	Macaca_mulatta
ENSXCOG00000013837	-	71	39.906	ENSMNEG00000041085	TIPARP	75	30.375	Macaca_nemestrina
ENSXCOG00000013837	-	71	39.906	ENSMLEG00000043232	TIPARP	75	30.178	Mandrillus_leucophaeus
ENSXCOG00000013837	-	67	39.683	ENSMAMG00000004108	TIPARP	63	32.301	Mastacembelus_armatus
ENSXCOG00000013837	-	79	60.526	ENSMZEG00005002496	-	97	47.692	Maylandia_zebra
ENSXCOG00000013837	-	86	53.086	ENSMZEG00005002354	-	98	53.086	Maylandia_zebra
ENSXCOG00000013837	-	67	41.270	ENSMZEG00005011128	TIPARP	53	41.270	Maylandia_zebra
ENSXCOG00000013837	-	74	36.458	ENSMGAG00000010699	TIPARP	67	31.461	Meleagris_gallopavo
ENSXCOG00000013837	-	71	39.906	ENSMAUG00000013170	Tiparp	62	39.906	Mesocricetus_auratus
ENSXCOG00000013837	-	74	31.057	ENSMICG00000049557	TIPARP	69	31.613	Microcebus_murinus
ENSXCOG00000013837	-	73	33.183	ENSMOCG00000011217	Tiparp	67	33.183	Microtus_ochrogaster
ENSXCOG00000013837	-	79	48.504	ENSMMOG00000000841	-	87	49.689	Mola_mola
ENSXCOG00000013837	-	67	41.270	ENSMMOG00000003779	TIPARP	65	32.450	Mola_mola
ENSXCOG00000013837	-	67	38.095	ENSMALG00000009322	TIPARP	63	31.849	Monopterus_albus
ENSXCOG00000013837	-	69	32.084	MGP_CAROLIEiJ_G0025044	Tiparp	65	32.494	Mus_caroli
ENSXCOG00000013837	-	77	30.237	ENSMUSG00000034640	Tiparp	75	30.237	Mus_musculus
ENSXCOG00000013837	-	77	30.435	MGP_PahariEiJ_G0026487	Tiparp	75	30.435	Mus_pahari
ENSXCOG00000013837	-	77	30.237	MGP_SPRETEiJ_G0025986	Tiparp	75	30.237	Mus_spretus
ENSXCOG00000013837	-	73	31.209	ENSMPUG00000002811	TIPARP	67	31.429	Mustela_putorius_furo
ENSXCOG00000013837	-	71	33.654	ENSMLUG00000006995	TIPARP	60	33.654	Myotis_lucifugus
ENSXCOG00000013837	-	71	39.906	ENSNGAG00000024372	Tiparp	75	30.237	Nannospalax_galili
ENSXCOG00000013837	-	54	44.178	ENSNBRG00000010331	-	100	44.178	Neolamprologus_brichardi
ENSXCOG00000013837	-	71	39.906	ENSNLEG00000003977	TIPARP	75	30.178	Nomascus_leucogenys
ENSXCOG00000013837	-	65	39.437	ENSMEUG00000011326	TIPARP	71	30.464	Notamacropus_eugenii
ENSXCOG00000013837	-	64	36.150	ENSOPRG00000003961	-	54	36.150	Ochotona_princeps
ENSXCOG00000013837	-	73	31.209	ENSODEG00000003454	TIPARP	67	32.088	Octodon_degus
ENSXCOG00000013837	-	67	39.683	ENSORLG00000023309	TIPARP	63	32.892	Oryzias_latipes
ENSXCOG00000013837	-	67	39.683	ENSORLG00020012576	TIPARP	63	31.637	Oryzias_latipes_hni
ENSXCOG00000013837	-	67	39.683	ENSORLG00015020733	TIPARP	63	31.788	Oryzias_latipes_hsok
ENSXCOG00000013837	-	67	41.270	ENSOMEG00000004712	TIPARP	63	33.040	Oryzias_melastigma
ENSXCOG00000013837	-	74	31.278	ENSOGAG00000003455	TIPARP	69	31.613	Otolemur_garnettii
ENSXCOG00000013837	-	71	39.906	ENSOARG00000002923	TIPARP	62	39.906	Ovis_aries
ENSXCOG00000013837	-	71	39.906	ENSPPAG00000029528	TIPARP	75	30.178	Pan_paniscus
ENSXCOG00000013837	-	73	31.429	ENSPPRG00000017076	TIPARP	67	31.868	Panthera_pardus
ENSXCOG00000013837	-	73	31.429	ENSPTIG00000014258	TIPARP	67	31.868	Panthera_tigris_altaica
ENSXCOG00000013837	-	71	39.906	ENSPTRG00000015561	TIPARP	75	30.178	Pan_troglodytes
ENSXCOG00000013837	-	71	39.906	ENSPANG00000007235	TIPARP	75	30.178	Papio_anubis
ENSXCOG00000013837	-	98	46.091	ENSPKIG00000003548	-	99	37.097	Paramormyrops_kingsleyae
ENSXCOG00000013837	-	67	41.270	ENSPKIG00000024616	tiparp	72	31.367	Paramormyrops_kingsleyae
ENSXCOG00000013837	-	70	31.193	ENSPSIG00000006564	-	99	32.093	Pelodiscus_sinensis
ENSXCOG00000013837	-	69	31.148	ENSPSIG00000010090	-	79	31.925	Pelodiscus_sinensis
ENSXCOG00000013837	-	70	38.889	ENSPSIG00000014291	-	100	32.569	Pelodiscus_sinensis
ENSXCOG00000013837	-	69	31.059	ENSPSIG00000017627	-	99	32.861	Pelodiscus_sinensis
ENSXCOG00000013837	-	62	46.032	ENSPSIG00000013221	-	99	31.731	Pelodiscus_sinensis
ENSXCOG00000013837	-	73	31.042	ENSPSIG00000005160	TIPARP	67	31.333	Pelodiscus_sinensis
ENSXCOG00000013837	-	69	30.909	ENSPMGG00000016670	TIPARP	64	32.426	Periophthalmus_magnuspinnatus
ENSXCOG00000013837	-	71	39.906	ENSPEMG00000014866	Tiparp	75	30.435	Peromyscus_maniculatus_bairdii
ENSXCOG00000013837	-	64	39.437	ENSPCIG00000003641	TIPARP	54	39.437	Phascolarctos_cinereus
ENSXCOG00000013837	-	66	89.407	ENSPFOG00000016905	-	99	77.855	Poecilia_formosa
ENSXCOG00000013837	-	69	30.667	ENSPFOG00000008850	TIPARP	64	32.450	Poecilia_formosa
ENSXCOG00000013837	-	67	32.671	ENSPLAG00000009297	TIPARP	64	32.671	Poecilia_latipinna
ENSXCOG00000013837	-	100	78.741	ENSPLAG00000012034	-	98	78.741	Poecilia_latipinna
ENSXCOG00000013837	-	69	30.667	ENSPMEG00000002480	TIPARP	64	32.450	Poecilia_mexicana
ENSXCOG00000013837	-	100	79.475	ENSPMEG00000004973	-	98	79.475	Poecilia_mexicana
ENSXCOG00000013837	-	100	76.119	ENSPREG00000022348	-	98	76.119	Poecilia_reticulata
ENSXCOG00000013837	-	67	32.671	ENSPREG00000016895	TIPARP	64	32.671	Poecilia_reticulata
ENSXCOG00000013837	-	71	39.906	ENSPPYG00000014234	TIPARP	75	30.178	Pongo_abelii
ENSXCOG00000013837	-	64	38.389	ENSPCAG00000002482	TIPARP	81	38.389	Procavia_capensis
ENSXCOG00000013837	-	81	39.906	ENSPCOG00000018471	TIPARP	74	39.906	Propithecus_coquereli
ENSXCOG00000013837	-	71	39.720	ENSPVAG00000001903	TIPARP	75	30.059	Pteropus_vampyrus
ENSXCOG00000013837	-	86	48.936	ENSPNYG00000018003	-	98	48.936	Pundamilia_nyererei
ENSXCOG00000013837	-	67	41.270	ENSPNYG00000010697	TIPARP	62	30.932	Pundamilia_nyererei
ENSXCOG00000013837	-	67	33.634	ENSPNAG00000013979	TIPARP	71	33.409	Pygocentrus_nattereri
ENSXCOG00000013837	-	71	39.906	ENSRNOG00000011238	Tiparp	75	30.435	Rattus_norvegicus
ENSXCOG00000013837	-	67	39.791	ENSRBIG00000022299	TIPARP	58	39.791	Rhinopithecus_bieti
ENSXCOG00000013837	-	71	39.906	ENSRROG00000041667	TIPARP	75	30.178	Rhinopithecus_roxellana
ENSXCOG00000013837	-	80	30.584	ENSSBOG00000030511	TIPARP	75	30.584	Saimiri_boliviensis_boliviensis
ENSXCOG00000013837	-	65	39.437	ENSSHAG00000018924	TIPARP	55	39.437	Sarcophilus_harrisii
ENSXCOG00000013837	-	95	50.909	ENSSFOG00015022974	-	84	50.909	Scleropages_formosus
ENSXCOG00000013837	-	67	39.683	ENSSMAG00000020479	TIPARP	95	33.333	Scophthalmus_maximus
ENSXCOG00000013837	-	67	41.270	ENSSDUG00000012080	TIPARP	63	32.237	Seriola_dumerili
ENSXCOG00000013837	-	99	61.411	ENSSDUG00000018796	-	83	61.411	Seriola_dumerili
ENSXCOG00000013837	-	67	41.270	ENSSLDG00000017252	TIPARP	63	32.237	Seriola_lalandi_dorsalis
ENSXCOG00000013837	-	52	33.692	ENSSPUG00000016837	-	79	33.692	Sphenodon_punctatus
ENSXCOG00000013837	-	73	31.486	ENSSPUG00000015764	TIPARP	69	31.486	Sphenodon_punctatus
ENSXCOG00000013837	-	99	49.468	ENSSPAG00000008458	-	100	47.705	Stegastes_partitus
ENSXCOG00000013837	-	69	30.217	ENSSPAG00000017423	TIPARP	63	32.096	Stegastes_partitus
ENSXCOG00000013837	-	71	39.906	ENSSSCG00000027646	TIPARP	62	39.906	Sus_scrofa
ENSXCOG00000013837	-	73	31.264	ENSTGUG00000017448	TIPARP	70	31.264	Taeniopygia_guttata
ENSXCOG00000013837	-	67	39.683	ENSTRUG00000022644	TIPARP	72	31.788	Takifugu_rubripes
ENSXCOG00000013837	-	73	31.429	ENSTTRG00000003102	TIPARP	67	31.868	Tursiops_truncatus
ENSXCOG00000013837	-	73	31.209	ENSUAMG00000018074	TIPARP	67	31.429	Ursus_americanus
ENSXCOG00000013837	-	73	31.209	ENSUMAG00000011453	TIPARP	67	31.429	Ursus_maritimus
ENSXCOG00000013837	-	65	39.906	ENSVPAG00000008484	TIPARP	67	31.868	Vicugna_pacos
ENSXCOG00000013837	-	73	31.429	ENSVVUG00000019862	TIPARP	67	31.648	Vulpes_vulpes
ENSXCOG00000013837	-	50	35.206	ENSXETG00000032370	-	99	35.206	Xenopus_tropicalis
ENSXCOG00000013837	-	70	30.734	ENSXETG00000012260	tiparp	64	31.019	Xenopus_tropicalis
ENSXCOG00000013837	-	100	97.818	ENSXMAG00000022584	-	100	97.818	Xiphophorus_maculatus
ENSXCOG00000013837	-	67	32.892	ENSXMAG00000022705	TIPARP	64	32.892	Xiphophorus_maculatus