EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXCOG00000013860 (Gene tree)
Gene ID
-
Gene Symbol
snrpf
Alias
snrpfl
Full Name
small nuclear ribonucleoprotein polypeptide F
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
2125 bases
Position
chrKQ557209.1:8448764-8450888
Accession
ZDB-GENE-040930-9
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000018407LSMPF01423.226.4e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000018639-264-ENSXCOP0000001840787 (aa)--
Gene Model
Click here to download ENSXCOG00000013860's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013860's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000013860snrpf9797.619ENSG00000139343SNRPF9897.619Homo_sapiens
ENSXCOG00000013860snrpf10096.552ENSAPOG00000003377snrpf6896.552Acanthochromis_polyacanthus
ENSXCOG00000013860snrpf9797.619ENSAMEG00000002166-9997.619Ailuropoda_melanoleuca
ENSXCOG00000013860snrpf8983.117ENSAMEG00000018718-8784.211Ailuropoda_melanoleuca
ENSXCOG00000013860snrpf9898.824ENSACIG00000013216snrpf10098.824Amphilophus_citrinellus
ENSXCOG00000013860snrpf9898.824ENSAOCG00000015108snrpf10098.824Amphiprion_ocellaris
ENSXCOG00000013860snrpf9898.824ENSAPEG00000022022snrpf10098.824Amphiprion_percula
ENSXCOG00000013860snrpf9997.674ENSATEG00000022625snrpf9297.674Anabas_testudineus
ENSXCOG00000013860snrpf8793.421ENSACAG00000014073SNRPF8793.421Anolis_carolinensis
ENSXCOG00000013860snrpf8288.732ENSANAG00000020297-6588.732Aotus_nancymaae
ENSXCOG00000013860snrpf9797.619ENSANAG00000032845SNRPF9897.619Aotus_nancymaae
ENSXCOG00000013860snrpf8467.123ENSANAG00000025860-8267.123Aotus_nancymaae
ENSXCOG00000013860snrpf9898.824ENSACLG00000016066snrpf10098.824Astatotilapia_calliptera
ENSXCOG00000013860snrpf8497.260ENSAMXG00000007421snrpf8597.260Astyanax_mexicanus
ENSXCOG00000013860snrpf9797.619ENSBTAG00000016271SNRPF9897.619Bos_taurus
ENSXCOG00000013860snrpf8790.789ENSBTAG00000050012-9090.411Bos_taurus
ENSXCOG00000013860snrpf8971.429WBGene00004918snr-58573.611Caenorhabditis_elegans
ENSXCOG00000013860snrpf9797.619ENSCJAG00000002705-9897.619Callithrix_jacchus
ENSXCOG00000013860snrpf9797.619ENSCAFG00000006395-7697.619Canis_familiaris
ENSXCOG00000013860snrpf8291.549ENSCAFG00000031151-8591.781Canis_familiaris
ENSXCOG00000013860snrpf9085.897ENSCAFG00020013161-7494.286Canis_lupus_dingo
ENSXCOG00000013860snrpf8291.549ENSCAFG00020010823-8591.781Canis_lupus_dingo
ENSXCOG00000013860snrpf8491.892ENSTSYG00000036502-8591.892Carlito_syrichta
ENSXCOG00000013860snrpf8483.562ENSTSYG00000030635-8483.562Carlito_syrichta
ENSXCOG00000013860snrpf9589.157ENSTSYG00000031636-6390.667Carlito_syrichta
ENSXCOG00000013860snrpf9797.619ENSCAPG00000007242SNRPF9997.619Cavia_aperea
ENSXCOG00000013860snrpf9797.619ENSCPOG00000013898SNRPF9897.619Cavia_porcellus
ENSXCOG00000013860snrpf9796.429ENSCCAG00000017356-9896.429Cebus_capucinus
ENSXCOG00000013860snrpf9788.095ENSCCAG00000033627-5789.041Cebus_capucinus
ENSXCOG00000013860snrpf9797.619ENSCCAG00000037378-9897.619Cebus_capucinus
ENSXCOG00000013860snrpf10096.552ENSCLAG00000007200SNRPF10096.552Chinchilla_lanigera
ENSXCOG00000013860snrpf9797.619ENSCSAG00000003602-6897.619Chlorocebus_sabaeus
ENSXCOG00000013860snrpf7196.774ENSCHOG00000009392SNRPF9796.774Choloepus_hoffmanni
ENSXCOG00000013860snrpf8489.041ENSCPBG00000006227-8589.041Chrysemys_picta_bellii
ENSXCOG00000013860snrpf9786.905ENSCPBG00000026463-8587.671Chrysemys_picta_bellii
ENSXCOG00000013860snrpf9791.667ENSCPBG00000024287-5993.151Chrysemys_picta_bellii
ENSXCOG00000013860snrpf9785.714ENSCPBG00000001985-8787.671Chrysemys_picta_bellii
ENSXCOG00000013860snrpf10087.356ENSCSAVG00000007498-8689.474Ciona_savignyi
ENSXCOG00000013860snrpf8490.411ENSCGRG00001008965-5790.411Cricetulus_griseus_chok1gshd
ENSXCOG00000013860snrpf9797.619ENSCGRG00001017100-9897.619Cricetulus_griseus_chok1gshd
ENSXCOG00000013860snrpf9797.619ENSCGRG00000000336-9897.619Cricetulus_griseus_crigri
ENSXCOG00000013860snrpf9189.873ENSCGRG00000018878-9289.189Cricetulus_griseus_crigri
ENSXCOG00000013860snrpf9798.810ENSCSEG00000004748snrpf9898.810Cynoglossus_semilaevis
ENSXCOG00000013860snrpf97100.000ENSCVAG00000000397snrpf67100.000Cyprinodon_variegatus
ENSXCOG00000013860snrpf9797.674ENSDARG00000105037snrpf9897.674Danio_rerio
ENSXCOG00000013860snrpf9796.429ENSDNOG00000048989-7596.429Dasypus_novemcinctus
ENSXCOG00000013860snrpf8381.944ENSDNOG00000049373-6381.944Dasypus_novemcinctus
ENSXCOG00000013860snrpf9797.619ENSDNOG00000043775-5497.619Dasypus_novemcinctus
ENSXCOG00000013860snrpf8087.143ENSDORG00000025351-9787.143Dipodomys_ordii
ENSXCOG00000013860snrpf6894.915ENSDORG00000029740-7294.915Dipodomys_ordii
ENSXCOG00000013860snrpf9777.381FBgn0000426SmF8380.822Drosophila_melanogaster
ENSXCOG00000013860snrpf9797.619ENSETEG00000001558-9897.619Echinops_telfairi
ENSXCOG00000013860snrpf9475.610ENSEBUG00000001793-7286.567Eptatretus_burgeri
ENSXCOG00000013860snrpf9797.619ENSECAG00000019817SNRPF6897.619Equus_caballus
ENSXCOG00000013860snrpf9797.619ENSEEUG00000013509SNRPF9997.619Erinaceus_europaeus
ENSXCOG00000013860snrpf9794.048ENSELUG00000007737RUXF8495.890Esox_lucius
ENSXCOG00000013860snrpf9797.619ENSELUG00000003121RUXF9897.619Esox_lucius
ENSXCOG00000013860snrpf8472.603ENSFCAG00000021942-8472.603Felis_catus
ENSXCOG00000013860snrpf9797.619ENSFCAG00000029966-9897.619Felis_catus
ENSXCOG00000013860snrpf9475.610ENSFCAG00000031148-7073.684Felis_catus
ENSXCOG00000013860snrpf9797.619ENSFALG00000010799SNRPF9897.619Ficedula_albicollis
ENSXCOG00000013860snrpf9797.619ENSFDAG00000002831-9897.619Fukomys_damarensis
ENSXCOG00000013860snrpf97100.000ENSFHEG00000003240snrpf74100.000Fundulus_heteroclitus
ENSXCOG00000013860snrpf97100.000ENSGMOG00000007741snrpf99100.000Gadus_morhua
ENSXCOG00000013860snrpf9797.619ENSGALG00000011409SNRPF9897.619Gallus_gallus
ENSXCOG00000013860snrpf10098.851ENSGAFG00000016187snrpf10098.851Gambusia_affinis
ENSXCOG00000013860snrpf9798.810ENSGACG00000020055snrpf9998.810Gasterosteus_aculeatus
ENSXCOG00000013860snrpf6993.333ENSGAGG00000020974-5290.323Gopherus_agassizii
ENSXCOG00000013860snrpf8590.541ENSGAGG00000012945-6990.789Gopherus_agassizii
ENSXCOG00000013860snrpf9885.882ENSGAGG00000022991-8687.838Gopherus_agassizii
ENSXCOG00000013860snrpf7783.582ENSGAGG00000014132-8183.582Gopherus_agassizii
ENSXCOG00000013860snrpf6988.333ENSGAGG00000011163-8691.837Gopherus_agassizii
ENSXCOG00000013860snrpf9797.619ENSGGOG00000001127-10096.471Gorilla_gorilla
ENSXCOG00000013860snrpf8974.026ENSGGOG00000039564-8872.603Gorilla_gorilla
ENSXCOG00000013860snrpf9478.049ENSGGOG00000039936-8175.342Gorilla_gorilla
ENSXCOG00000013860snrpf9797.619ENSHGLG00000009108SNRPF9897.619Heterocephalus_glaber_female
ENSXCOG00000013860snrpf9796.429ENSHGLG00000021172-9896.429Heterocephalus_glaber_female
ENSXCOG00000013860snrpf9796.429ENSHGLG00100019596-9896.429Heterocephalus_glaber_male
ENSXCOG00000013860snrpf9797.619ENSHGLG00100008103-9997.619Heterocephalus_glaber_male
ENSXCOG00000013860snrpf7587.500ENSHCOG00000018663snrpf5687.500Hippocampus_comes
ENSXCOG00000013860snrpf97100.000ENSIPUG00000018994snrpf10098.824Ictalurus_punctatus
ENSXCOG00000013860snrpf9797.619ENSSTOG00000010434-9897.619Ictidomys_tridecemlineatus
ENSXCOG00000013860snrpf7791.045ENSJJAG00000004828-8692.857Jaculus_jaculus
ENSXCOG00000013860snrpf9782.143ENSJJAG00000010502-8783.562Jaculus_jaculus
ENSXCOG00000013860snrpf10096.552ENSJJAG00000011272-10096.552Jaculus_jaculus
ENSXCOG00000013860snrpf9778.571ENSJJAG00000004558-8779.452Jaculus_jaculus
ENSXCOG00000013860snrpf9898.824ENSKMAG00000013566snrpf9998.824Kryptolebias_marmoratus
ENSXCOG00000013860snrpf9798.810ENSLBEG00000008800snrpf9898.810Labrus_bergylta
ENSXCOG00000013860snrpf9797.619ENSLACG00000002456-7297.619Latimeria_chalumnae
ENSXCOG00000013860snrpf9797.619ENSLOCG00000015744snrpf9897.619Lepisosteus_oculatus
ENSXCOG00000013860snrpf9797.619ENSLAFG00000017426SNRPF9897.619Loxodonta_africana
ENSXCOG00000013860snrpf9897.647ENSMAMG00000016593snrpf10097.647Mastacembelus_armatus
ENSXCOG00000013860snrpf9898.824ENSMZEG00005014701snrpf10098.824Maylandia_zebra
ENSXCOG00000013860snrpf9797.619ENSMGAG00000011453-7697.619Meleagris_gallopavo
ENSXCOG00000013860snrpf9572.289ENSMAUG00000010289-8672.222Mesocricetus_auratus
ENSXCOG00000013860snrpf8493.151ENSMAUG00000008799-8593.151Mesocricetus_auratus
ENSXCOG00000013860snrpf8597.297ENSMAUG00000019737-10097.297Mesocricetus_auratus
ENSXCOG00000013860snrpf8597.297ENSMAUG00000016909-10097.297Mesocricetus_auratus
ENSXCOG00000013860snrpf8490.411ENSMICG00000030494-5890.411Microcebus_murinus
ENSXCOG00000013860snrpf9797.619ENSMICG00000012153-9897.619Microcebus_murinus
ENSXCOG00000013860snrpf8484.932ENSMOCG00000022166-8084.932Microtus_ochrogaster
ENSXCOG00000013860snrpf7880.882ENSMOCG00000020220-8780.882Microtus_ochrogaster
ENSXCOG00000013860snrpf9797.619ENSMOCG00000020437Snrpf9897.619Microtus_ochrogaster
ENSXCOG00000013860snrpf9798.810ENSMMOG00000007127snrpf9998.810Mola_mola
ENSXCOG00000013860snrpf9797.619ENSMODG00000008091SNRPF7497.619Monodelphis_domestica
ENSXCOG00000013860snrpf9898.824ENSMALG00000012328snrpf10098.824Monopterus_albus
ENSXCOG00000013860snrpf9797.619MGP_CAROLIEiJ_G0015735-9897.619Mus_caroli
ENSXCOG00000013860snrpf9797.619ENSMUSG00000020018Snrpf9897.619Mus_musculus
ENSXCOG00000013860snrpf9797.619MGP_PahariEiJ_G0031350Snrpf9897.619Mus_pahari
ENSXCOG00000013860snrpf9797.619MGP_SPRETEiJ_G0016553Snrpf9897.619Mus_spretus
ENSXCOG00000013860snrpf9797.619ENSMPUG00000007176-7597.619Mustela_putorius_furo
ENSXCOG00000013860snrpf9797.619ENSMLUG00000027932-7997.619Myotis_lucifugus
ENSXCOG00000013860snrpf9797.619ENSMLUG00000026149-7997.619Myotis_lucifugus
ENSXCOG00000013860snrpf9797.619ENSMLUG00000013577-9997.619Myotis_lucifugus
ENSXCOG00000013860snrpf9797.619ENSMLUG00000029201-7997.619Myotis_lucifugus
ENSXCOG00000013860snrpf9778.571ENSMLUG00000026269-6976.712Myotis_lucifugus
ENSXCOG00000013860snrpf9797.619ENSNGAG00000024292-9897.619Nannospalax_galili
ENSXCOG00000013860snrpf7290.476ENSNGAG00000005851-7190.000Nannospalax_galili
ENSXCOG00000013860snrpf10096.552ENSNBRG00000011682snrpf8996.552Neolamprologus_brichardi
ENSXCOG00000013860snrpf8469.863ENSMEUG00000000671SNRPF8669.863Notamacropus_eugenii
ENSXCOG00000013860snrpf9797.619ENSODEG00000010328-10096.471Octodon_degus
ENSXCOG00000013860snrpf9797.619ENSOCUG00000010925SNRPF7497.619Oryctolagus_cuniculus
ENSXCOG00000013860snrpf8497.260ENSORLG00020008216snrpf8697.260Oryzias_latipes_hni
ENSXCOG00000013860snrpf8497.260ENSORLG00015007418snrpf8697.260Oryzias_latipes_hsok
ENSXCOG00000013860snrpf9897.647ENSOMEG00000003018snrpf10097.647Oryzias_melastigma
ENSXCOG00000013860snrpf8495.890ENSOGAG00000030323-8595.890Otolemur_garnettii
ENSXCOG00000013860snrpf9797.619ENSOARG00000011853-7397.619Ovis_aries
ENSXCOG00000013860snrpf8974.026ENSPPAG00000037479-8872.603Pan_paniscus
ENSXCOG00000013860snrpf9478.049ENSPPAG00000037544-8175.342Pan_paniscus
ENSXCOG00000013860snrpf9797.619ENSPPRG00000005875-9897.619Panthera_pardus
ENSXCOG00000013860snrpf9474.390ENSPPRG00000007449-7473.973Panthera_pardus
ENSXCOG00000013860snrpf9797.619ENSPTIG00000007520SNRPF9897.619Panthera_tigris_altaica
ENSXCOG00000013860snrpf9476.829ENSPTIG00000005117-8773.973Panthera_tigris_altaica
ENSXCOG00000013860snrpf8974.026ENSPTRG00000047717-8872.603Pan_troglodytes
ENSXCOG00000013860snrpf9478.049ENSPTRG00000043814-8175.342Pan_troglodytes
ENSXCOG00000013860snrpf97100.000ENSPKIG00000014784snrpf92100.000Paramormyrops_kingsleyae
ENSXCOG00000013860snrpf9797.619ENSPSIG00000016462SNRPF9897.619Pelodiscus_sinensis
ENSXCOG00000013860snrpf9798.810ENSPMGG00000023548snrpf9998.810Periophthalmus_magnuspinnatus
ENSXCOG00000013860snrpf9797.619ENSPEMG00000023326Snrpf9897.619Peromyscus_maniculatus_bairdii
ENSXCOG00000013860snrpf9898.824ENSPLAG00000023932snrpf10098.824Poecilia_latipinna
ENSXCOG00000013860snrpf9898.824ENSPMEG00000003377snrpf10098.824Poecilia_mexicana
ENSXCOG00000013860snrpf10098.851ENSPREG00000022635snrpf10098.851Poecilia_reticulata
ENSXCOG00000013860snrpf9797.619ENSPPYG00000004847-9897.619Pongo_abelii
ENSXCOG00000013860snrpf9797.619ENSPCOG00000023833-9897.619Propithecus_coquereli
ENSXCOG00000013860snrpf9797.619ENSPVAG00000009036SNRPF9897.619Pteropus_vampyrus
ENSXCOG00000013860snrpf9898.824ENSPNYG00000021712snrpf10098.824Pundamilia_nyererei
ENSXCOG00000013860snrpf9897.647ENSPNAG00000019117snrpf10097.647Pygocentrus_nattereri
ENSXCOG00000013860snrpf9797.619ENSRNOG00000005556Snrpf9897.619Rattus_norvegicus
ENSXCOG00000013860snrpf8494.521ENSRBIG00000030414-8594.521Rhinopithecus_bieti
ENSXCOG00000013860snrpf8494.521ENSRROG00000021975-8594.521Rhinopithecus_roxellana
ENSXCOG00000013860snrpf8060.563YPR182WSMX38360.563Saccharomyces_cerevisiae
ENSXCOG00000013860snrpf9175.949ENSSBOG00000027638-9175.949Saimiri_boliviensis_boliviensis
ENSXCOG00000013860snrpf9797.619ENSSBOG00000036179-9897.619Saimiri_boliviensis_boliviensis
ENSXCOG00000013860snrpf8482.192ENSSBOG00000032297-8382.192Saimiri_boliviensis_boliviensis
ENSXCOG00000013860snrpf9796.429ENSSBOG00000012868-9896.429Saimiri_boliviensis_boliviensis
ENSXCOG00000013860snrpf9995.349ENSSHAG00000012294SNRPF7795.349Sarcophilus_harrisii
ENSXCOG00000013860snrpf7598.462ENSSFOG00015021523snrpf9798.462Scleropages_formosus
ENSXCOG00000013860snrpf10096.552ENSSMAG00000005533snrpf10096.552Scophthalmus_maximus
ENSXCOG00000013860snrpf72100.000ENSSDUG00000016283snrpf75100.000Seriola_dumerili
ENSXCOG00000013860snrpf9471.951ENSSLDG00000003885-9375.000Seriola_lalandi_dorsalis
ENSXCOG00000013860snrpf97100.000ENSSLDG00000005119snrpf98100.000Seriola_lalandi_dorsalis
ENSXCOG00000013860snrpf9896.471ENSSPUG00000014590-10096.471Sphenodon_punctatus
ENSXCOG00000013860snrpf9998.837ENSSPAG00000003283snrpf9898.837Stegastes_partitus
ENSXCOG00000013860snrpf9797.619ENSSSCG00000000895SNRPF9897.619Sus_scrofa
ENSXCOG00000013860snrpf7998.551ENSTRUG00000014956snrpf10098.551Takifugu_rubripes
ENSXCOG00000013860snrpf9798.810ENSTNIG00000012672snrpf9898.810Tetraodon_nigroviridis
ENSXCOG00000013860snrpf8469.863ENSTTRG00000006070SNRPF8569.863Tursiops_truncatus
ENSXCOG00000013860snrpf9797.619ENSUAMG00000008176-9897.619Ursus_americanus
ENSXCOG00000013860snrpf10083.908ENSUAMG00000001101-8885.526Ursus_americanus
ENSXCOG00000013860snrpf9797.619ENSUMAG00000003528-9897.619Ursus_maritimus
ENSXCOG00000013860snrpf8785.526ENSUMAG00000006177-8885.526Ursus_maritimus
ENSXCOG00000013860snrpf9797.619ENSVPAG00000008712-9897.619Vicugna_pacos
ENSXCOG00000013860snrpf8789.474ENSVVUG00000023821-9489.041Vulpes_vulpes
ENSXCOG00000013860snrpf8474.667ENSXETG00000021630snrpf8672.000Xenopus_tropicalis
ENSXCOG00000013860snrpf9898.824ENSXMAG00000015448snrpf10098.824Xiphophorus_maculatus

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