EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000013875 (Gene tree)
Gene ID: -
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3084 bases
Position: chrKQ557209.1:8621686-8624769
Accession: ZDB-GENE-101014-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000018430	MRP-S32	PF10210.9	7.6e-35	1	1
ENSXCOP00000018431	MRP-S32	PF10210.9	8.4e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000018663	-	402	-	ENSXCOP00000018431	133 (aa)	-	-
ENSXCOT00000018662	-	390	-	ENSXCOP00000018430	129 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013875's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013875	mrpl42	98	70.139	ENSAPOG00000010677	mrpl42	100	70.139	Acanthochromis_polyacanthus
ENSXCOG00000013875	mrpl42	98	71.329	ENSAOCG00000011620	mrpl42	100	71.329	Amphiprion_ocellaris
ENSXCOG00000013875	mrpl42	98	71.329	ENSAPEG00000019516	mrpl42	100	71.329	Amphiprion_percula
ENSXCOG00000013875	mrpl42	88	66.917	ENSATEG00000014106	mrpl42	100	66.917	Anabas_testudineus
ENSXCOG00000013875	mrpl42	75	68.041	ENSACAG00000012606	MRPL42	68	67.000	Anolis_carolinensis
ENSXCOG00000013875	mrpl42	98	65.753	ENSACLG00000026856	mrpl42	100	65.753	Astatotilapia_calliptera
ENSXCOG00000013875	mrpl42	95	47.619	ENSAMXG00000035149	mrpl42	82	47.619	Astyanax_mexicanus
ENSXCOG00000013875	mrpl42	98	60.993	ENSCSEG00000010067	mrpl42	99	60.993	Cynoglossus_semilaevis
ENSXCOG00000013875	mrpl42	98	74.150	ENSCVAG00000002612	mrpl42	100	74.150	Cyprinodon_variegatus
ENSXCOG00000013875	mrpl42	98	52.778	ENSDARG00000079391	mrpl42	100	52.778	Danio_rerio
ENSXCOG00000013875	mrpl42	78	46.729	ENSEBUG00000005581	mrpl42	80	46.729	Eptatretus_burgeri
ENSXCOG00000013875	mrpl42	98	57.823	ENSELUG00000001973	mrpl42	99	57.823	Esox_lucius
ENSXCOG00000013875	mrpl42	98	70.068	ENSFHEG00000018696	mrpl42	100	70.068	Fundulus_heteroclitus
ENSXCOG00000013875	mrpl42	75	82.474	ENSGMOG00000002972	mrpl42	100	82.474	Gadus_morhua
ENSXCOG00000013875	mrpl42	98	82.313	ENSGAFG00000018373	mrpl42	100	82.313	Gambusia_affinis
ENSXCOG00000013875	mrpl42	74	83.333	ENSGACG00000018811	mrpl42	99	83.333	Gasterosteus_aculeatus
ENSXCOG00000013875	mrpl42	98	65.753	ENSHBUG00000015960	mrpl42	100	65.753	Haplochromis_burtoni
ENSXCOG00000013875	mrpl42	98	59.722	ENSHCOG00000014046	mrpl42	100	59.722	Hippocampus_comes
ENSXCOG00000013875	mrpl42	75	59.794	ENSIPUG00000015395	mrpl42	66	59.794	Ictalurus_punctatus
ENSXCOG00000013875	mrpl42	98	68.966	ENSKMAG00000013671	mrpl42	100	68.966	Kryptolebias_marmoratus
ENSXCOG00000013875	mrpl42	99	63.514	ENSLBEG00000028618	mrpl42	99	63.514	Labrus_bergylta
ENSXCOG00000013875	mrpl42	56	68.056	ENSLOCG00000015284	mrpl42	57	68.056	Lepisosteus_oculatus
ENSXCOG00000013875	mrpl42	98	73.050	ENSMAMG00000009737	mrpl42	100	73.050	Mastacembelus_armatus
ENSXCOG00000013875	mrpl42	98	65.753	ENSMZEG00005008545	mrpl42	96	65.753	Maylandia_zebra
ENSXCOG00000013875	mrpl42	64	79.268	ENSMMOG00000002317	mrpl42	54	79.268	Mola_mola
ENSXCOG00000013875	mrpl42	98	60.645	ENSMALG00000015794	mrpl42	96	60.645	Monopterus_albus
ENSXCOG00000013875	mrpl42	98	65.753	ENSNBRG00000003307	mrpl42	100	65.753	Neolamprologus_brichardi
ENSXCOG00000013875	mrpl42	98	65.753	ENSONIG00000011753	mrpl42	100	65.753	Oreochromis_niloticus
ENSXCOG00000013875	mrpl42	78	56.436	ENSOANG00000019984	-	69	56.436	Ornithorhynchus_anatinus
ENSXCOG00000013875	mrpl42	98	63.699	ENSORLG00000013500	mrpl42	85	63.699	Oryzias_latipes
ENSXCOG00000013875	mrpl42	98	64.384	ENSORLG00020000548	mrpl42	100	64.384	Oryzias_latipes_hni
ENSXCOG00000013875	mrpl42	98	64.138	ENSORLG00015016984	mrpl42	100	64.138	Oryzias_latipes_hsok
ENSXCOG00000013875	mrpl42	98	66.207	ENSOMEG00000010700	mrpl42	100	66.207	Oryzias_melastigma
ENSXCOG00000013875	mrpl42	75	77.320	ENSPKIG00000025457	mrpl42	66	77.320	Paramormyrops_kingsleyae
ENSXCOG00000013875	mrpl42	96	61.654	ENSPMGG00000019705	mrpl42	91	61.654	Periophthalmus_magnuspinnatus
ENSXCOG00000013875	mrpl42	75	56.000	ENSPMAG00000008091	mrpl42	66	55.340	Petromyzon_marinus
ENSXCOG00000013875	mrpl42	100	81.879	ENSPFOG00000016539	mrpl42	100	81.879	Poecilia_formosa
ENSXCOG00000013875	mrpl42	98	80.952	ENSPLAG00000001255	mrpl42	100	80.952	Poecilia_latipinna
ENSXCOG00000013875	mrpl42	98	80.952	ENSPMEG00000016462	mrpl42	100	80.952	Poecilia_mexicana
ENSXCOG00000013875	mrpl42	75	90.722	ENSPREG00000012053	mrpl42	70	90.722	Poecilia_reticulata
ENSXCOG00000013875	mrpl42	98	65.753	ENSPNYG00000009586	mrpl42	100	65.753	Pundamilia_nyererei
ENSXCOG00000013875	mrpl42	88	53.982	ENSPNAG00000020753	mrpl42	74	53.982	Pygocentrus_nattereri
ENSXCOG00000013875	mrpl42	98	63.946	ENSSMAG00000000262	mrpl42	100	63.946	Scophthalmus_maximus
ENSXCOG00000013875	mrpl42	98	66.667	ENSSDUG00000005949	mrpl42	100	66.667	Seriola_dumerili
ENSXCOG00000013875	mrpl42	98	67.808	ENSSLDG00000010159	mrpl42	100	67.808	Seriola_lalandi_dorsalis
ENSXCOG00000013875	mrpl42	99	60.811	ENSTRUG00000025949	mrpl42	99	60.811	Takifugu_rubripes
ENSXCOG00000013875	mrpl42	75	60.825	ENSXETG00000032902	mrpl42	80	60.000	Xenopus_tropicalis