EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000013930 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3726 bases
Position: chrKQ557209.1:8973792-8977517
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000018508	zf-CCCH	PF00642.24	3.4e-05	1	1
ENSXCOP00000018507	DEAD	PF00270.29	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000018740	-	654	-	ENSXCOP00000018507	217 (aa)	-	-
ENSXCOT00000018741	-	1137	-	ENSXCOP00000018508	378 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000013930	-	81	47.253	ENSXCOG00000000601	-	71	47.253

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013930	-	82	71.196	ENSG00000163214	DHX57	80	40.992	Homo_sapiens
ENSXCOG00000013930	-	69	40.299	ENSANAG00000036489	-	63	40.299	Aotus_nancymaae
ENSXCOG00000013930	-	82	71.739	ENSANAG00000020674	-	79	39.314	Aotus_nancymaae
ENSXCOG00000013930	-	83	70.811	ENSCAFG00020022782	DHX57	81	40.365	Canis_lupus_dingo
ENSXCOG00000013930	-	82	71.739	ENSCATG00000030750	DHX57	80	39.844	Cercocebus_atys
ENSXCOG00000013930	-	82	71.739	ENSCANG00000039093	DHX57	80	39.323	Colobus_angolensis_palliatus
ENSXCOG00000013930	-	93	46.400	ENSGALG00000053399	-	86	46.400	Gallus_gallus
ENSXCOG00000013930	-	82	71.196	ENSGGOG00000008187	DHX57	80	40.470	Gorilla_gorilla
ENSXCOG00000013930	-	82	71.739	ENSMFAG00000040122	DHX57	80	39.844	Macaca_fascicularis
ENSXCOG00000013930	-	82	71.739	ENSMNEG00000039994	DHX57	80	39.844	Macaca_nemestrina
ENSXCOG00000013930	-	82	71.739	ENSMLEG00000029727	DHX57	80	40.104	Mandrillus_leucophaeus
ENSXCOG00000013930	-	82	71.196	ENSNLEG00000016369	DHX57	80	39.583	Nomascus_leucogenys
ENSXCOG00000013930	-	82	71.196	ENSPPAG00000029117	DHX57	80	40.992	Pan_paniscus
ENSXCOG00000013930	-	82	71.196	ENSPTRG00000011853	DHX57	80	40.992	Pan_troglodytes
ENSXCOG00000013930	-	82	71.739	ENSPANG00000024244	DHX57	80	39.583	Papio_anubis
ENSXCOG00000013930	-	82	71.739	ENSRBIG00000031743	DHX57	80	39.323	Rhinopithecus_bieti
ENSXCOG00000013930	-	82	71.739	ENSRROG00000009988	DHX57	80	39.323	Rhinopithecus_roxellana
ENSXCOG00000013930	-	82	70.652	ENSUAMG00000025059	DHX57	81	40.625	Ursus_americanus
ENSXCOG00000013930	-	82	70.652	ENSUMAG00000013400	DHX57	80	40.576	Ursus_maritimus