EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000013956 (Gene tree)
Gene ID: -
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage-specific DNA binding protein 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 38647 bases
Position: chrKQ557219.1:27499301-27537947
Accession: ZDB-GENE-040426-1272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000018543	CPSF_A	PF03178.15	2.1e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000018776	-	2946	-	ENSXCOP00000018543	981 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000013956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000013956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000013956	ddb1	99	91.224	ENSG00000167986	DDB1	100	96.575	Homo_sapiens
ENSXCOG00000013956	ddb1	100	98.267	ENSAPOG00000005036	ddb1	100	98.267	Acanthochromis_polyacanthus
ENSXCOG00000013956	ddb1	99	91.327	ENSAMEG00000016518	DDB1	86	91.327	Ailuropoda_melanoleuca
ENSXCOG00000013956	ddb1	100	98.369	ENSACIG00000020624	ddb1	100	98.369	Amphilophus_citrinellus
ENSXCOG00000013956	ddb1	99	98.163	ENSAOCG00000003066	ddb1	86	98.163	Amphiprion_ocellaris
ENSXCOG00000013956	ddb1	99	98.163	ENSAPEG00000000092	ddb1	90	98.163	Amphiprion_percula
ENSXCOG00000013956	ddb1	99	98.571	ENSATEG00000020571	ddb1	100	93.286	Anabas_testudineus
ENSXCOG00000013956	ddb1	99	89.762	ENSAPLG00000007174	DDB1	85	89.762	Anas_platyrhynchos
ENSXCOG00000013956	ddb1	99	90.408	ENSACAG00000017758	DDB1	86	90.408	Anolis_carolinensis
ENSXCOG00000013956	ddb1	99	91.224	ENSANAG00000021878	DDB1	86	91.224	Aotus_nancymaae
ENSXCOG00000013956	ddb1	99	98.163	ENSACLG00000012401	ddb1	99	97.539	Astatotilapia_calliptera
ENSXCOG00000013956	ddb1	99	91.224	ENSBTAG00000021569	DDB1	80	91.224	Bos_taurus
ENSXCOG00000013956	ddb1	100	38.072	WBGene00010890	ddb-1	86	38.072	Caenorhabditis_elegans
ENSXCOG00000013956	ddb1	99	91.224	ENSCJAG00000019319	DDB1	86	91.224	Callithrix_jacchus
ENSXCOG00000013956	ddb1	99	91.327	ENSCAFG00000016264	DDB1	90	91.327	Canis_familiaris
ENSXCOG00000013956	ddb1	99	91.327	ENSCAFG00020012722	DDB1	90	91.327	Canis_lupus_dingo
ENSXCOG00000013956	ddb1	99	91.224	ENSCHIG00000014969	DDB1	86	91.224	Capra_hircus
ENSXCOG00000013956	ddb1	99	90.816	ENSTSYG00000008027	DDB1	86	90.816	Carlito_syrichta
ENSXCOG00000013956	ddb1	98	91.032	ENSCAPG00000010786	DDB1	86	91.032	Cavia_aperea
ENSXCOG00000013956	ddb1	99	91.020	ENSCPOG00000009956	DDB1	86	91.020	Cavia_porcellus
ENSXCOG00000013956	ddb1	99	91.224	ENSCCAG00000035883	DDB1	86	91.224	Cebus_capucinus
ENSXCOG00000013956	ddb1	99	88.911	ENSCATG00000044495	DDB1	86	88.911	Cercocebus_atys
ENSXCOG00000013956	ddb1	99	91.122	ENSCLAG00000004126	DDB1	86	91.122	Chinchilla_lanigera
ENSXCOG00000013956	ddb1	99	91.224	ENSCSAG00000006392	DDB1	86	91.224	Chlorocebus_sabaeus
ENSXCOG00000013956	ddb1	85	90.808	ENSCHOG00000011377	DDB1	74	90.808	Choloepus_hoffmanni
ENSXCOG00000013956	ddb1	99	90.714	ENSCPBG00000017728	DDB1	86	90.714	Chrysemys_picta_bellii
ENSXCOG00000013956	ddb1	99	61.996	ENSCING00000007437	-	86	61.996	Ciona_intestinalis
ENSXCOG00000013956	ddb1	93	61.405	ENSCSAVG00000004783	-	100	60.404	Ciona_savignyi
ENSXCOG00000013956	ddb1	99	91.224	ENSCANG00000019948	DDB1	86	91.224	Colobus_angolensis_palliatus
ENSXCOG00000013956	ddb1	99	91.327	ENSCGRG00001016599	Ddb1	90	90.222	Cricetulus_griseus_chok1gshd
ENSXCOG00000013956	ddb1	99	91.327	ENSCGRG00000013427	Ddb1	86	91.327	Cricetulus_griseus_crigri
ENSXCOG00000013956	ddb1	99	97.551	ENSCSEG00000012499	ddb1	100	95.956	Cynoglossus_semilaevis
ENSXCOG00000013956	ddb1	99	98.571	ENSCVAG00000019531	ddb1	91	98.571	Cyprinodon_variegatus
ENSXCOG00000013956	ddb1	99	91.437	ENSDARG00000074431	ddb1	86	91.437	Danio_rerio
ENSXCOG00000013956	ddb1	99	91.327	ENSDNOG00000014884	DDB1	89	91.327	Dasypus_novemcinctus
ENSXCOG00000013956	ddb1	81	95.455	ENSDORG00000000127	Ddb1	83	95.455	Dipodomys_ordii
ENSXCOG00000013956	ddb1	99	60.812	FBgn0260962	pic	86	60.812	Drosophila_melanogaster
ENSXCOG00000013956	ddb1	66	95.276	ENSETEG00000001053	-	57	95.276	Echinops_telfairi
ENSXCOG00000013956	ddb1	91	84.252	ENSEBUG00000014593	ddb1	97	84.252	Eptatretus_burgeri
ENSXCOG00000013956	ddb1	99	91.327	ENSEASG00005008184	DDB1	86	91.327	Equus_asinus_asinus
ENSXCOG00000013956	ddb1	99	91.327	ENSECAG00000012136	DDB1	86	91.327	Equus_caballus
ENSXCOG00000013956	ddb1	90	86.078	ENSEEUG00000003194	DDB1	78	86.078	Erinaceus_europaeus
ENSXCOG00000013956	ddb1	99	96.735	ENSELUG00000023868	ddb1	86	96.735	Esox_lucius
ENSXCOG00000013956	ddb1	99	91.327	ENSFCAG00000029716	DDB1	86	91.327	Felis_catus
ENSXCOG00000013956	ddb1	99	90.510	ENSFALG00000011981	DDB1	86	90.510	Ficedula_albicollis
ENSXCOG00000013956	ddb1	99	91.122	ENSFDAG00000005128	DDB1	86	91.122	Fukomys_damarensis
ENSXCOG00000013956	ddb1	89	98.947	ENSFHEG00000022133	ddb1	84	98.947	Fundulus_heteroclitus
ENSXCOG00000013956	ddb1	79	98.328	ENSGMOG00000019386	ddb1	80	98.328	Gadus_morhua
ENSXCOG00000013956	ddb1	99	90.714	ENSGALG00000042333	DDB1	86	90.714	Gallus_gallus
ENSXCOG00000013956	ddb1	99	99.796	ENSGAFG00000013142	ddb1	91	99.796	Gambusia_affinis
ENSXCOG00000013956	ddb1	99	97.959	ENSGACG00000017182	ddb1	90	97.959	Gasterosteus_aculeatus
ENSXCOG00000013956	ddb1	94	90.476	ENSGAGG00000014124	DDB1	85	90.476	Gopherus_agassizii
ENSXCOG00000013956	ddb1	99	91.224	ENSGGOG00000004052	DDB1	86	91.224	Gorilla_gorilla
ENSXCOG00000013956	ddb1	99	98.163	ENSHBUG00000008873	ddb1	86	98.163	Haplochromis_burtoni
ENSXCOG00000013956	ddb1	99	91.122	ENSHGLG00000018430	DDB1	86	91.122	Heterocephalus_glaber_female
ENSXCOG00000013956	ddb1	99	90.000	ENSHGLG00100014475	DDB1	86	90.000	Heterocephalus_glaber_male
ENSXCOG00000013956	ddb1	99	97.857	ENSHCOG00000018670	ddb1	90	97.857	Hippocampus_comes
ENSXCOG00000013956	ddb1	99	95.204	ENSIPUG00000005612	DDB1	89	95.204	Ictalurus_punctatus
ENSXCOG00000013956	ddb1	99	91.224	ENSSTOG00000007552	DDB1	86	91.224	Ictidomys_tridecemlineatus
ENSXCOG00000013956	ddb1	99	91.224	ENSJJAG00000017769	Ddb1	86	91.224	Jaculus_jaculus
ENSXCOG00000013956	ddb1	99	98.673	ENSKMAG00000002315	ddb1	91	98.673	Kryptolebias_marmoratus
ENSXCOG00000013956	ddb1	98	98.441	ENSLBEG00000017065	ddb1	99	98.441	Labrus_bergylta
ENSXCOG00000013956	ddb1	99	91.020	ENSLACG00000017611	DDB1	88	90.938	Latimeria_chalumnae
ENSXCOG00000013956	ddb1	91	86.220	ENSLOCG00000000012	ddb1	84	86.220	Lepisosteus_oculatus
ENSXCOG00000013956	ddb1	99	91.122	ENSLAFG00000011513	DDB1	86	91.122	Loxodonta_africana
ENSXCOG00000013956	ddb1	99	91.224	ENSMFAG00000042035	DDB1	86	91.224	Macaca_fascicularis
ENSXCOG00000013956	ddb1	99	91.224	ENSMMUG00000002691	DDB1	100	90.789	Macaca_mulatta
ENSXCOG00000013956	ddb1	99	91.224	ENSMNEG00000031559	DDB1	86	91.224	Macaca_nemestrina
ENSXCOG00000013956	ddb1	99	91.224	ENSMLEG00000044136	DDB1	89	89.516	Mandrillus_leucophaeus
ENSXCOG00000013956	ddb1	99	98.673	ENSMAMG00000014372	ddb1	86	98.673	Mastacembelus_armatus
ENSXCOG00000013956	ddb1	99	98.163	ENSMZEG00005013835	ddb1	86	98.163	Maylandia_zebra
ENSXCOG00000013956	ddb1	93	90.121	ENSMGAG00000004990	DDB1	85	90.121	Meleagris_gallopavo
ENSXCOG00000013956	ddb1	99	91.327	ENSMAUG00000012926	Ddb1	86	91.327	Mesocricetus_auratus
ENSXCOG00000013956	ddb1	99	91.429	ENSMICG00000013703	DDB1	86	91.429	Microcebus_murinus
ENSXCOG00000013956	ddb1	99	91.224	ENSMOCG00000020499	Ddb1	86	91.224	Microtus_ochrogaster
ENSXCOG00000013956	ddb1	100	98.675	ENSMMOG00000001758	ddb1	100	98.675	Mola_mola
ENSXCOG00000013956	ddb1	99	82.299	ENSMODG00000020353	DDB1	85	82.299	Monodelphis_domestica
ENSXCOG00000013956	ddb1	99	98.469	ENSMALG00000014071	ddb1	86	98.469	Monopterus_albus
ENSXCOG00000013956	ddb1	99	91.327	MGP_CAROLIEiJ_G0022695	Ddb1	86	91.327	Mus_caroli
ENSXCOG00000013956	ddb1	99	91.429	ENSMUSG00000024740	Ddb1	86	91.429	Mus_musculus
ENSXCOG00000013956	ddb1	99	91.327	MGP_PahariEiJ_G0014189	Ddb1	86	91.327	Mus_pahari
ENSXCOG00000013956	ddb1	99	91.429	MGP_SPRETEiJ_G0023609	Ddb1	86	91.429	Mus_spretus
ENSXCOG00000013956	ddb1	99	90.510	ENSMPUG00000014200	DDB1	88	90.510	Mustela_putorius_furo
ENSXCOG00000013956	ddb1	99	91.429	ENSMLUG00000013232	DDB1	86	91.429	Myotis_lucifugus
ENSXCOG00000013956	ddb1	99	91.224	ENSNGAG00000009384	Ddb1	86	91.224	Nannospalax_galili
ENSXCOG00000013956	ddb1	99	98.265	ENSNBRG00000019581	ddb1	86	98.265	Neolamprologus_brichardi
ENSXCOG00000013956	ddb1	99	88.306	ENSNLEG00000002022	DDB1	86	88.306	Nomascus_leucogenys
ENSXCOG00000013956	ddb1	88	100.000	ENSMEUG00000001099	DDB1	78	100.000	Notamacropus_eugenii
ENSXCOG00000013956	ddb1	89	87.486	ENSOPRG00000008254	DDB1	76	87.486	Ochotona_princeps
ENSXCOG00000013956	ddb1	99	91.224	ENSODEG00000002419	DDB1	86	91.224	Octodon_degus
ENSXCOG00000013956	ddb1	99	98.265	ENSONIG00000005804	ddb1	86	98.265	Oreochromis_niloticus
ENSXCOG00000013956	ddb1	89	90.596	ENSOANG00000004897	DDB1	84	90.596	Ornithorhynchus_anatinus
ENSXCOG00000013956	ddb1	99	91.327	ENSOCUG00000001667	DDB1	86	91.327	Oryctolagus_cuniculus
ENSXCOG00000013956	ddb1	99	97.755	ENSORLG00000001399	ddb1	92	97.755	Oryzias_latipes
ENSXCOG00000013956	ddb1	99	97.653	ENSORLG00020001277	ddb1	87	97.653	Oryzias_latipes_hni
ENSXCOG00000013956	ddb1	99	97.755	ENSORLG00015002080	ddb1	90	97.755	Oryzias_latipes_hsok
ENSXCOG00000013956	ddb1	99	97.959	ENSOMEG00000006181	ddb1	99	91.834	Oryzias_melastigma
ENSXCOG00000013956	ddb1	99	91.429	ENSOGAG00000016103	DDB1	86	91.429	Otolemur_garnettii
ENSXCOG00000013956	ddb1	99	91.224	ENSOARG00000011716	DDB1	85	91.224	Ovis_aries
ENSXCOG00000013956	ddb1	99	91.224	ENSPPAG00000035343	DDB1	86	91.224	Pan_paniscus
ENSXCOG00000013956	ddb1	99	91.327	ENSPPRG00000013300	DDB1	86	91.327	Panthera_pardus
ENSXCOG00000013956	ddb1	98	91.345	ENSPTIG00000006909	DDB1	84	91.345	Panthera_tigris_altaica
ENSXCOG00000013956	ddb1	99	91.224	ENSPTRG00000003737	DDB1	86	91.224	Pan_troglodytes
ENSXCOG00000013956	ddb1	99	91.224	ENSPANG00000000242	DDB1	86	91.224	Papio_anubis
ENSXCOG00000013956	ddb1	99	95.408	ENSPKIG00000019213	ddb1	86	95.408	Paramormyrops_kingsleyae
ENSXCOG00000013956	ddb1	98	90.041	ENSPSIG00000013275	DDB1	86	90.041	Pelodiscus_sinensis
ENSXCOG00000013956	ddb1	100	98.267	ENSPMGG00000021179	ddb1	100	98.267	Periophthalmus_magnuspinnatus
ENSXCOG00000013956	ddb1	99	91.327	ENSPEMG00000012241	Ddb1	86	91.327	Peromyscus_maniculatus_bairdii
ENSXCOG00000013956	ddb1	98	86.458	ENSPMAG00000008479	ddb1	94	86.458	Petromyzon_marinus
ENSXCOG00000013956	ddb1	99	91.429	ENSPCIG00000002643	DDB1	86	91.429	Phascolarctos_cinereus
ENSXCOG00000013956	ddb1	99	99.796	ENSPFOG00000002768	ddb1	86	99.796	Poecilia_formosa
ENSXCOG00000013956	ddb1	99	99.796	ENSPLAG00000017227	ddb1	89	99.796	Poecilia_latipinna
ENSXCOG00000013956	ddb1	99	99.796	ENSPMEG00000011398	ddb1	89	99.796	Poecilia_mexicana
ENSXCOG00000013956	ddb1	99	99.796	ENSPREG00000004440	ddb1	89	99.796	Poecilia_reticulata
ENSXCOG00000013956	ddb1	99	87.067	ENSPPYG00000003193	DDB1	86	87.067	Pongo_abelii
ENSXCOG00000013956	ddb1	82	88.583	ENSPCAG00000011040	DDB1	70	88.583	Procavia_capensis
ENSXCOG00000013956	ddb1	99	90.733	ENSPCOG00000015176	DDB1	86	90.733	Propithecus_coquereli
ENSXCOG00000013956	ddb1	99	91.122	ENSPVAG00000003847	DDB1	86	91.122	Pteropus_vampyrus
ENSXCOG00000013956	ddb1	99	96.020	ENSPNAG00000006635	ddb1	89	96.020	Pygocentrus_nattereri
ENSXCOG00000013956	ddb1	99	91.429	ENSRNOG00000020715	Ddb1	86	91.429	Rattus_norvegicus
ENSXCOG00000013956	ddb1	99	91.224	ENSRBIG00000033611	DDB1	87	91.224	Rhinopithecus_bieti
ENSXCOG00000013956	ddb1	99	91.224	ENSRROG00000041407	DDB1	86	91.224	Rhinopithecus_roxellana
ENSXCOG00000013956	ddb1	99	91.327	ENSSBOG00000019775	DDB1	86	91.327	Saimiri_boliviensis_boliviensis
ENSXCOG00000013956	ddb1	93	88.571	ENSSHAG00000011600	DDB1	85	88.571	Sarcophilus_harrisii
ENSXCOG00000013956	ddb1	99	95.714	ENSSFOG00015011151	ddb1	88	95.714	Scleropages_formosus
ENSXCOG00000013956	ddb1	99	98.061	ENSSMAG00000009495	ddb1	86	98.061	Scophthalmus_maximus
ENSXCOG00000013956	ddb1	99	98.673	ENSSDUG00000004642	ddb1	86	98.673	Seriola_dumerili
ENSXCOG00000013956	ddb1	99	98.673	ENSSLDG00000015804	ddb1	86	98.673	Seriola_lalandi_dorsalis
ENSXCOG00000013956	ddb1	69	94.340	ENSSARG00000003290	-	62	94.340	Sorex_araneus
ENSXCOG00000013956	ddb1	99	90.612	ENSSPUG00000019338	DDB1	86	90.612	Sphenodon_punctatus
ENSXCOG00000013956	ddb1	99	98.469	ENSSPAG00000009888	ddb1	100	95.316	Stegastes_partitus
ENSXCOG00000013956	ddb1	99	90.714	ENSSSCG00000013094	DDB1	86	90.714	Sus_scrofa
ENSXCOG00000013956	ddb1	99	90.918	ENSTGUG00000006414	DDB1	86	90.918	Taeniopygia_guttata
ENSXCOG00000013956	ddb1	99	97.449	ENSTRUG00000016682	ddb1	100	94.603	Takifugu_rubripes
ENSXCOG00000013956	ddb1	86	91.201	ENSTNIG00000009565	ddb1	84	91.201	Tetraodon_nigroviridis
ENSXCOG00000013956	ddb1	91	83.993	ENSTTRG00000011055	DDB1	80	83.993	Tursiops_truncatus
ENSXCOG00000013956	ddb1	99	91.327	ENSUAMG00000017793	DDB1	85	91.327	Ursus_americanus
ENSXCOG00000013956	ddb1	99	91.327	ENSUMAG00000011788	DDB1	89	91.327	Ursus_maritimus
ENSXCOG00000013956	ddb1	94	86.349	ENSVPAG00000007963	DDB1	82	86.349	Vicugna_pacos
ENSXCOG00000013956	ddb1	99	91.327	ENSVVUG00000004987	DDB1	86	91.327	Vulpes_vulpes
ENSXCOG00000013956	ddb1	100	88.493	ENSXETG00000008820	ddb1	86	88.493	Xenopus_tropicalis
ENSXCOG00000013956	ddb1	99	100.000	ENSXMAG00000000022	ddb1	91	100.000	Xiphophorus_maculatus