EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000014178 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153654
Alias: -
Full Name: zgc:153654
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3327 bases
Position: chrKQ557211.1:17630718-17634044
Accession: ZDB-GENE-060929-1102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000018836	MMR_HSR1	PF01926.23	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000019072	-	1425	-	ENSXCOP00000018836	474 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000014178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000014178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000014178	zgc:153654	94	50.897	ENSXCOG00000006325	-	98	50.897
ENSXCOG00000014178	zgc:153654	93	49.887	ENSXCOG00000008734	-	98	49.887

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000014178	zgc:153654	96	69.383	ENSAPOG00000000010	zgc:153654	98	69.383	Acanthochromis_polyacanthus
ENSXCOG00000014178	zgc:153654	93	52.027	ENSAPOG00000011126	-	90	52.027	Acanthochromis_polyacanthus
ENSXCOG00000014178	zgc:153654	62	53.559	ENSACIG00000023205	-	96	53.559	Amphilophus_citrinellus
ENSXCOG00000014178	zgc:153654	94	72.197	ENSACIG00000018021	zgc:153654	99	72.197	Amphilophus_citrinellus
ENSXCOG00000014178	zgc:153654	93	52.252	ENSACIG00000009430	-	96	51.945	Amphilophus_citrinellus
ENSXCOG00000014178	zgc:153654	94	71.910	ENSAOCG00000011919	zgc:153654	93	71.910	Amphiprion_ocellaris
ENSXCOG00000014178	zgc:153654	92	53.409	ENSAOCG00000008818	si:ch211-197g15.10	95	53.409	Amphiprion_ocellaris
ENSXCOG00000014178	zgc:153654	97	71.024	ENSAPEG00000012978	zgc:153654	97	71.024	Amphiprion_percula
ENSXCOG00000014178	zgc:153654	92	53.182	ENSAPEG00000006547	si:ch211-197g15.10	95	53.182	Amphiprion_percula
ENSXCOG00000014178	zgc:153654	93	51.020	ENSATEG00000016811	-	97	51.020	Anabas_testudineus
ENSXCOG00000014178	zgc:153654	97	47.403	ENSATEG00000016831	-	99	47.403	Anabas_testudineus
ENSXCOG00000014178	zgc:153654	96	50.658	ENSATEG00000016836	-	99	50.658	Anabas_testudineus
ENSXCOG00000014178	zgc:153654	95	70.601	ENSATEG00000008195	zgc:153654	97	70.601	Anabas_testudineus
ENSXCOG00000014178	zgc:153654	95	47.788	ENSATEG00000016818	-	97	47.788	Anabas_testudineus
ENSXCOG00000014178	zgc:153654	93	51.474	ENSACLG00000013499	-	97	51.474	Astatotilapia_calliptera
ENSXCOG00000014178	zgc:153654	93	50.450	ENSACLG00000021969	-	97	50.801	Astatotilapia_calliptera
ENSXCOG00000014178	zgc:153654	97	70.153	ENSACLG00000009420	zgc:153654	96	70.153	Astatotilapia_calliptera
ENSXCOG00000014178	zgc:153654	92	50.455	ENSACLG00000022141	-	94	50.682	Astatotilapia_calliptera
ENSXCOG00000014178	zgc:153654	92	50.455	ENSACLG00000022167	-	96	50.682	Astatotilapia_calliptera
ENSXCOG00000014178	zgc:153654	94	56.054	ENSAMXG00000002119	-	99	56.054	Astyanax_mexicanus
ENSXCOG00000014178	zgc:153654	94	56.376	ENSAMXG00000031541	-	99	56.376	Astyanax_mexicanus
ENSXCOG00000014178	zgc:153654	94	46.102	ENSCPBG00000016962	-	98	46.102	Chrysemys_picta_bellii
ENSXCOG00000014178	zgc:153654	93	52.809	ENSCVAG00000015674	-	97	52.809	Cyprinodon_variegatus
ENSXCOG00000014178	zgc:153654	70	52.994	ENSCVAG00000004989	-	99	52.994	Cyprinodon_variegatus
ENSXCOG00000014178	zgc:153654	97	76.253	ENSCVAG00000013437	zgc:153654	96	76.253	Cyprinodon_variegatus
ENSXCOG00000014178	zgc:153654	93	52.527	ENSCVAG00000010378	-	97	52.527	Cyprinodon_variegatus
ENSXCOG00000014178	zgc:153654	93	54.260	ENSCVAG00000000405	-	96	54.260	Cyprinodon_variegatus
ENSXCOG00000014178	zgc:153654	92	53.303	ENSCVAG00000000409	-	93	53.303	Cyprinodon_variegatus
ENSXCOG00000014178	zgc:153654	92	49.123	ENSDARG00000071361	si:ch211-197g15.10	95	49.123	Danio_rerio
ENSXCOG00000014178	zgc:153654	94	46.889	ENSDARG00000094984	si:ch211-197g15.8	99	46.889	Danio_rerio
ENSXCOG00000014178	zgc:153654	93	48.874	ENSDARG00000071355	si:ch211-197g15.7	96	53.257	Danio_rerio
ENSXCOG00000014178	zgc:153654	94	54.709	ENSDARG00000060322	zgc:153654	98	54.709	Danio_rerio
ENSXCOG00000014178	zgc:153654	93	48.869	ENSDARG00000009673	si:ch211-197g15.6	90	48.869	Danio_rerio
ENSXCOG00000014178	zgc:153654	94	55.605	ENSDARG00000092883	si:dkey-193b15.5	98	55.605	Danio_rerio
ENSXCOG00000014178	zgc:153654	94	47.875	ENSDARG00000002293	si:ch211-197g15.6	97	47.875	Danio_rerio
ENSXCOG00000014178	zgc:153654	64	51.307	ENSDARG00000094747	si:ch211-197g15.6	89	51.307	Danio_rerio
ENSXCOG00000014178	zgc:153654	92	52.154	ENSELUG00000013242	si:ch211-197g15.10	97	52.154	Esox_lucius
ENSXCOG00000014178	zgc:153654	94	58.427	ENSELUG00000008265	zgc:153654	97	58.427	Esox_lucius
ENSXCOG00000014178	zgc:153654	56	53.383	ENSFHEG00000019876	-	94	53.383	Fundulus_heteroclitus
ENSXCOG00000014178	zgc:153654	93	52.018	ENSFHEG00000019903	-	97	52.018	Fundulus_heteroclitus
ENSXCOG00000014178	zgc:153654	93	50.897	ENSFHEG00000013876	-	98	50.670	Fundulus_heteroclitus
ENSXCOG00000014178	zgc:153654	97	83.007	ENSFHEG00000009844	zgc:153654	98	83.007	Fundulus_heteroclitus
ENSXCOG00000014178	zgc:153654	82	57.545	ENSGMOG00000012872	-	100	57.545	Gadus_morhua
ENSXCOG00000014178	zgc:153654	93	48.869	ENSGAFG00000007761	-	97	48.869	Gambusia_affinis
ENSXCOG00000014178	zgc:153654	97	92.375	ENSGAFG00000019143	zgc:153654	94	92.375	Gambusia_affinis
ENSXCOG00000014178	zgc:153654	95	68.527	ENSGACG00000009755	zgc:153654	97	68.527	Gasterosteus_aculeatus
ENSXCOG00000014178	zgc:153654	93	48.770	ENSGACG00000007958	si:ch211-197g15.10	97	48.770	Gasterosteus_aculeatus
ENSXCOG00000014178	zgc:153654	94	46.548	ENSGAGG00000022623	-	98	46.548	Gopherus_agassizii
ENSXCOG00000014178	zgc:153654	93	50.676	ENSHBUG00000001391	-	97	50.676	Haplochromis_burtoni
ENSXCOG00000014178	zgc:153654	93	51.474	ENSHBUG00000018097	-	97	51.474	Haplochromis_burtoni
ENSXCOG00000014178	zgc:153654	97	70.153	ENSHBUG00000008124	zgc:153654	96	70.153	Haplochromis_burtoni
ENSXCOG00000014178	zgc:153654	94	52.691	ENSIPUG00000014380	zgc:153654	98	52.691	Ictalurus_punctatus
ENSXCOG00000014178	zgc:153654	92	50.110	ENSIPUG00000025096	si:ch211-197g15.6	94	50.110	Ictalurus_punctatus
ENSXCOG00000014178	zgc:153654	93	49.324	ENSKMAG00000004691	si:ch211-197g15.10	100	51.157	Kryptolebias_marmoratus
ENSXCOG00000014178	zgc:153654	97	74.292	ENSKMAG00000013818	zgc:153654	97	74.292	Kryptolebias_marmoratus
ENSXCOG00000014178	zgc:153654	94	49.324	ENSLBEG00000027620	si:ch211-197g15.10	97	49.324	Labrus_bergylta
ENSXCOG00000014178	zgc:153654	92	52.620	ENSMAMG00000006432	-	96	52.620	Mastacembelus_armatus
ENSXCOG00000014178	zgc:153654	57	55.019	ENSMAMG00000006464	-	94	55.019	Mastacembelus_armatus
ENSXCOG00000014178	zgc:153654	95	69.265	ENSMAMG00000002775	zgc:153654	94	69.265	Mastacembelus_armatus
ENSXCOG00000014178	zgc:153654	93	53.725	ENSMAMG00000006478	-	99	53.725	Mastacembelus_armatus
ENSXCOG00000014178	zgc:153654	62	52.685	ENSMAMG00000006527	-	97	52.685	Mastacembelus_armatus
ENSXCOG00000014178	zgc:153654	93	50.794	ENSMZEG00005009847	-	91	50.794	Maylandia_zebra
ENSXCOG00000014178	zgc:153654	97	69.935	ENSMZEG00005000213	zgc:153654	96	69.935	Maylandia_zebra
ENSXCOG00000014178	zgc:153654	93	50.562	ENSMZEG00005016305	-	97	50.562	Maylandia_zebra
ENSXCOG00000014178	zgc:153654	93	50.113	ENSMZEG00005016191	-	97	50.572	Maylandia_zebra
ENSXCOG00000014178	zgc:153654	92	51.030	ENSMZEG00005016298	-	94	51.030	Maylandia_zebra
ENSXCOG00000014178	zgc:153654	94	66.517	ENSMMOG00000008706	zgc:153654	95	66.517	Mola_mola
ENSXCOG00000014178	zgc:153654	93	52.154	ENSMALG00000017812	-	97	52.154	Monopterus_albus
ENSXCOG00000014178	zgc:153654	95	65.778	ENSMALG00000010184	zgc:153654	97	65.778	Monopterus_albus
ENSXCOG00000014178	zgc:153654	97	69.499	ENSNBRG00000021369	zgc:153654	96	69.499	Neolamprologus_brichardi
ENSXCOG00000014178	zgc:153654	98	48.927	ENSNBRG00000021612	-	99	48.927	Neolamprologus_brichardi
ENSXCOG00000014178	zgc:153654	93	49.663	ENSNBRG00000021454	-	98	49.213	Neolamprologus_brichardi
ENSXCOG00000014178	zgc:153654	93	48.758	ENSNBRG00000022795	-	97	49.533	Neolamprologus_brichardi
ENSXCOG00000014178	zgc:153654	92	50.342	ENSNBRG00000021762	-	97	50.342	Neolamprologus_brichardi
ENSXCOG00000014178	zgc:153654	93	50.676	ENSNBRG00000021865	-	95	50.676	Neolamprologus_brichardi
ENSXCOG00000014178	zgc:153654	97	70.153	ENSONIG00000001120	zgc:153654	96	70.153	Oreochromis_niloticus
ENSXCOG00000014178	zgc:153654	93	49.888	ENSONIG00000014147	-	98	49.888	Oreochromis_niloticus
ENSXCOG00000014178	zgc:153654	93	50.000	ENSONIG00000012749	-	93	50.000	Oreochromis_niloticus
ENSXCOG00000014178	zgc:153654	93	51.242	ENSORLG00000000696	-	97	51.242	Oryzias_latipes
ENSXCOG00000014178	zgc:153654	93	47.450	ENSORLG00000030184	-	99	47.450	Oryzias_latipes
ENSXCOG00000014178	zgc:153654	93	47.461	ENSORLG00000027011	-	99	47.461	Oryzias_latipes
ENSXCOG00000014178	zgc:153654	93	50.670	ENSORLG00000008608	-	97	50.670	Oryzias_latipes
ENSXCOG00000014178	zgc:153654	93	50.790	ENSORLG00020014451	-	97	50.790	Oryzias_latipes_hni
ENSXCOG00000014178	zgc:153654	93	47.020	ENSORLG00020014470	-	99	47.020	Oryzias_latipes_hni
ENSXCOG00000014178	zgc:153654	63	45.806	ENSORLG00020014413	-	97	45.806	Oryzias_latipes_hni
ENSXCOG00000014178	zgc:153654	94	50.442	ENSORLG00015009849	-	99	50.330	Oryzias_latipes_hsok
ENSXCOG00000014178	zgc:153654	93	50.000	ENSORLG00015015397	-	95	50.000	Oryzias_latipes_hsok
ENSXCOG00000014178	zgc:153654	54	50.388	ENSORLG00015009911	-	99	50.388	Oryzias_latipes_hsok
ENSXCOG00000014178	zgc:153654	93	51.919	ENSORLG00015000293	-	97	51.919	Oryzias_latipes_hsok
ENSXCOG00000014178	zgc:153654	93	48.124	ENSORLG00015009930	-	99	48.124	Oryzias_latipes_hsok
ENSXCOG00000014178	zgc:153654	93	50.893	ENSORLG00015009699	-	97	50.893	Oryzias_latipes_hsok
ENSXCOG00000014178	zgc:153654	75	49.815	ENSOMEG00000004053	-	98	40.570	Oryzias_melastigma
ENSXCOG00000014178	zgc:153654	59	43.885	ENSOMEG00000003821	-	94	43.885	Oryzias_melastigma
ENSXCOG00000014178	zgc:153654	92	46.413	ENSOMEG00000004005	-	98	46.413	Oryzias_melastigma
ENSXCOG00000014178	zgc:153654	94	43.392	ENSOMEG00000004075	-	99	43.392	Oryzias_melastigma
ENSXCOG00000014178	zgc:153654	55	55.598	ENSOMEG00000020481	-	99	55.598	Oryzias_melastigma
ENSXCOG00000014178	zgc:153654	94	47.797	ENSOMEG00000004019	-	96	47.797	Oryzias_melastigma
ENSXCOG00000014178	zgc:153654	93	51.131	ENSOMEG00000004201	-	97	51.131	Oryzias_melastigma
ENSXCOG00000014178	zgc:153654	93	47.007	ENSOMEG00000003940	-	99	47.000	Oryzias_melastigma
ENSXCOG00000014178	zgc:153654	94	49.574	ENSOMEG00000003837	-	95	49.574	Oryzias_melastigma
ENSXCOG00000014178	zgc:153654	94	46.916	ENSOMEG00000003965	-	99	46.916	Oryzias_melastigma
ENSXCOG00000014178	zgc:153654	94	51.007	ENSOMEG00000004183	-	98	51.007	Oryzias_melastigma
ENSXCOG00000014178	zgc:153654	93	50.790	ENSOMEG00000000087	-	96	50.790	Oryzias_melastigma
ENSXCOG00000014178	zgc:153654	59	41.071	ENSPKIG00000018532	-	90	42.143	Paramormyrops_kingsleyae
ENSXCOG00000014178	zgc:153654	58	44.000	ENSPKIG00000020102	-	99	44.000	Paramormyrops_kingsleyae
ENSXCOG00000014178	zgc:153654	59	46.619	ENSPKIG00000020074	-	93	46.619	Paramormyrops_kingsleyae
ENSXCOG00000014178	zgc:153654	59	44.681	ENSPKIG00000018512	-	91	43.972	Paramormyrops_kingsleyae
ENSXCOG00000014178	zgc:153654	59	47.535	ENSPKIG00000018686	-	95	46.503	Paramormyrops_kingsleyae
ENSXCOG00000014178	zgc:153654	62	44.027	ENSPKIG00000020057	-	95	44.027	Paramormyrops_kingsleyae
ENSXCOG00000014178	zgc:153654	59	46.099	ENSPKIG00000018587	-	91	46.099	Paramormyrops_kingsleyae
ENSXCOG00000014178	zgc:153654	60	42.857	ENSPKIG00000018649	-	96	42.857	Paramormyrops_kingsleyae
ENSXCOG00000014178	zgc:153654	94	44.072	ENSPSIG00000002607	-	98	44.072	Pelodiscus_sinensis
ENSXCOG00000014178	zgc:153654	68	52.484	ENSPMGG00000000928	zgc:153654	99	53.560	Periophthalmus_magnuspinnatus
ENSXCOG00000014178	zgc:153654	93	41.463	ENSPMAG00000000471	-	97	41.463	Petromyzon_marinus
ENSXCOG00000014178	zgc:153654	94	50.554	ENSPFOG00000022999	-	100	50.554	Poecilia_formosa
ENSXCOG00000014178	zgc:153654	93	47.534	ENSPFOG00000011182	-	97	47.534	Poecilia_formosa
ENSXCOG00000014178	zgc:153654	95	90.487	ENSPFOG00000014250	zgc:153654	98	90.487	Poecilia_formosa
ENSXCOG00000014178	zgc:153654	60	54.064	ENSPFOG00000000122	-	97	53.875	Poecilia_formosa
ENSXCOG00000014178	zgc:153654	59	55.197	ENSPFOG00000015594	-	94	55.197	Poecilia_formosa
ENSXCOG00000014178	zgc:153654	92	51.025	ENSPFOG00000000111	-	96	51.025	Poecilia_formosa
ENSXCOG00000014178	zgc:153654	65	52.244	ENSPLAG00000001301	-	63	52.244	Poecilia_latipinna
ENSXCOG00000014178	zgc:153654	94	51.121	ENSPLAG00000001307	-	97	51.121	Poecilia_latipinna
ENSXCOG00000014178	zgc:153654	94	50.667	ENSPLAG00000001304	-	98	50.667	Poecilia_latipinna
ENSXCOG00000014178	zgc:153654	93	47.964	ENSPLAG00000021480	-	97	47.964	Poecilia_latipinna
ENSXCOG00000014178	zgc:153654	57	52.963	ENSPLAG00000014458	-	95	52.963	Poecilia_latipinna
ENSXCOG00000014178	zgc:153654	96	90.810	ENSPLAG00000007998	zgc:153654	96	90.810	Poecilia_latipinna
ENSXCOG00000014178	zgc:153654	65	52.903	ENSPMEG00000013347	-	63	52.903	Poecilia_mexicana
ENSXCOG00000014178	zgc:153654	63	51.333	ENSPMEG00000013339	-	98	51.333	Poecilia_mexicana
ENSXCOG00000014178	zgc:153654	94	50.673	ENSPMEG00000013357	-	97	50.673	Poecilia_mexicana
ENSXCOG00000014178	zgc:153654	97	91.285	ENSPMEG00000003409	zgc:153654	96	91.285	Poecilia_mexicana
ENSXCOG00000014178	zgc:153654	93	47.738	ENSPMEG00000006889	-	97	47.738	Poecilia_mexicana
ENSXCOG00000014178	zgc:153654	58	52.878	ENSPMEG00000016192	-	93	52.878	Poecilia_mexicana
ENSXCOG00000014178	zgc:153654	93	47.964	ENSPREG00000009457	-	97	47.964	Poecilia_reticulata
ENSXCOG00000014178	zgc:153654	97	91.068	ENSPREG00000010723	zgc:153654	96	91.068	Poecilia_reticulata
ENSXCOG00000014178	zgc:153654	59	51.971	ENSPREG00000011848	-	91	51.971	Poecilia_reticulata
ENSXCOG00000014178	zgc:153654	94	51.570	ENSPREG00000011892	-	96	51.570	Poecilia_reticulata
ENSXCOG00000014178	zgc:153654	65	52.581	ENSPREG00000011808	-	63	52.581	Poecilia_reticulata
ENSXCOG00000014178	zgc:153654	97	70.153	ENSPNYG00000013106	zgc:153654	96	70.153	Pundamilia_nyererei
ENSXCOG00000014178	zgc:153654	93	51.927	ENSPNYG00000014740	-	97	51.927	Pundamilia_nyererei
ENSXCOG00000014178	zgc:153654	94	49.666	ENSPNYG00000016375	-	95	51.495	Pundamilia_nyererei
ENSXCOG00000014178	zgc:153654	94	53.139	ENSPNAG00000013999	zgc:153654	99	53.139	Pygocentrus_nattereri
ENSXCOG00000014178	zgc:153654	53	45.059	ENSSFOG00015022102	-	86	45.059	Scleropages_formosus
ENSXCOG00000014178	zgc:153654	59	52.669	ENSSDUG00000009870	-	91	52.669	Seriola_dumerili
ENSXCOG00000014178	zgc:153654	98	71.767	ENSSDUG00000012708	zgc:153654	97	71.767	Seriola_dumerili
ENSXCOG00000014178	zgc:153654	94	53.007	ENSSDUG00000009840	-	98	53.007	Seriola_dumerili
ENSXCOG00000014178	zgc:153654	62	52.333	ENSSLDG00000001591	-	83	52.333	Seriola_lalandi_dorsalis
ENSXCOG00000014178	zgc:153654	95	48.894	ENSSLDG00000001629	-	99	48.673	Seriola_lalandi_dorsalis
ENSXCOG00000014178	zgc:153654	98	71.552	ENSSLDG00000022597	zgc:153654	97	71.552	Seriola_lalandi_dorsalis
ENSXCOG00000014178	zgc:153654	94	45.434	ENSSPUG00000010680	-	99	45.455	Sphenodon_punctatus
ENSXCOG00000014178	zgc:153654	65	52.090	ENSSPAG00000005921	-	98	52.090	Stegastes_partitus
ENSXCOG00000014178	zgc:153654	59	46.099	ENSSPAG00000007037	-	90	46.099	Stegastes_partitus
ENSXCOG00000014178	zgc:153654	97	68.615	ENSSPAG00000018073	zgc:153654	98	68.615	Stegastes_partitus
ENSXCOG00000014178	zgc:153654	94	64.062	ENSTRUG00000016083	-	89	64.062	Takifugu_rubripes
ENSXCOG00000014178	zgc:153654	61	67.354	ENSTNIG00000017187	zgc:153654	100	67.354	Tetraodon_nigroviridis
ENSXCOG00000014178	zgc:153654	97	97.603	ENSXMAG00000010193	zgc:153654	96	97.603	Xiphophorus_maculatus
ENSXCOG00000014178	zgc:153654	93	50.452	ENSXMAG00000002325	-	97	50.452	Xiphophorus_maculatus
ENSXCOG00000014178	zgc:153654	65	51.935	ENSXMAG00000028256	-	64	51.935	Xiphophorus_maculatus
ENSXCOG00000014178	zgc:153654	94	51.121	ENSXMAG00000002467	-	97	51.121	Xiphophorus_maculatus