EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000014185 (Gene tree)
Gene ID: -
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 6660 bases
Position: chrKQ557215.1:27029308-27035967
Accession: ZDB-GENE-040426-1495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000018849	RNA_pol_A_bac	PF01000.26	1.1e-31	1	1
ENSXCOP00000018849	RNA_pol_L	PF01193.24	2.9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000019085	-	1047	-	ENSXCOP00000018849	348 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000014185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000014185's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000014185	polr1c	100	73.276	ENSG00000171453	POLR1C	100	74.434	Homo_sapiens
ENSXCOG00000014185	polr1c	100	85.185	ENSAPOG00000024356	polr1c	100	86.040	Acanthochromis_polyacanthus
ENSXCOG00000014185	polr1c	99	73.410	ENSAMEG00000012205	POLR1C	99	73.410	Ailuropoda_melanoleuca
ENSXCOG00000014185	polr1c	94	76.133	ENSACIG00000016268	polr1c	91	77.039	Amphilophus_citrinellus
ENSXCOG00000014185	polr1c	100	84.615	ENSAOCG00000011687	polr1c	97	85.470	Amphiprion_ocellaris
ENSXCOG00000014185	polr1c	100	85.470	ENSAPEG00000002433	polr1c	100	86.325	Amphiprion_percula
ENSXCOG00000014185	polr1c	99	89.112	ENSATEG00000005985	polr1c	99	89.398	Anabas_testudineus
ENSXCOG00000014185	polr1c	86	72.093	ENSAPLG00000002908	POLR1C	100	72.093	Anas_platyrhynchos
ENSXCOG00000014185	polr1c	90	74.679	ENSACAG00000009764	POLR1C	89	74.679	Anolis_carolinensis
ENSXCOG00000014185	polr1c	100	73.563	ENSANAG00000025805	POLR1C	99	73.563	Aotus_nancymaae
ENSXCOG00000014185	polr1c	100	87.749	ENSACLG00000006573	polr1c	100	88.604	Astatotilapia_calliptera
ENSXCOG00000014185	polr1c	55	30.256	ENSACLG00000004854	polr2c	78	30.256	Astatotilapia_calliptera
ENSXCOG00000014185	polr1c	100	81.322	ENSAMXG00000012062	polr1c	99	81.322	Astyanax_mexicanus
ENSXCOG00000014185	polr1c	100	73.563	ENSBTAG00000018969	POLR1C	100	73.563	Bos_taurus
ENSXCOG00000014185	polr1c	55	31.068	WBGene00007971	rpb-3	67	31.068	Caenorhabditis_elegans
ENSXCOG00000014185	polr1c	92	45.266	WBGene00019275	rpac-40	92	45.266	Caenorhabditis_elegans
ENSXCOG00000014185	polr1c	100	72.701	ENSCJAG00000005594	POLR1C	100	72.701	Callithrix_jacchus
ENSXCOG00000014185	polr1c	100	72.989	ENSCAFG00000001872	POLR1C	100	72.989	Canis_familiaris
ENSXCOG00000014185	polr1c	100	72.989	ENSCAFG00020012018	POLR1C	100	72.989	Canis_lupus_dingo
ENSXCOG00000014185	polr1c	60	30.556	ENSCAFG00020007660	POLR2C	60	30.556	Canis_lupus_dingo
ENSXCOG00000014185	polr1c	100	73.563	ENSCHIG00000004352	POLR1C	100	73.563	Capra_hircus
ENSXCOG00000014185	polr1c	100	73.563	ENSTSYG00000011921	POLR1C	100	73.563	Carlito_syrichta
ENSXCOG00000014185	polr1c	86	75.000	ENSCAPG00000015364	POLR1C	88	75.000	Cavia_aperea
ENSXCOG00000014185	polr1c	100	74.425	ENSCPOG00000038098	POLR1C	100	74.425	Cavia_porcellus
ENSXCOG00000014185	polr1c	100	73.276	ENSCCAG00000020169	POLR1C	100	73.276	Cebus_capucinus
ENSXCOG00000014185	polr1c	100	72.989	ENSCATG00000044045	POLR1C	100	72.989	Cercocebus_atys
ENSXCOG00000014185	polr1c	100	74.713	ENSCLAG00000009266	POLR1C	100	74.713	Chinchilla_lanigera
ENSXCOG00000014185	polr1c	60	30.556	ENSCLAG00000013676	POLR2C	52	30.556	Chinchilla_lanigera
ENSXCOG00000014185	polr1c	100	72.126	ENSCSAG00000011913	POLR1C	100	72.126	Chlorocebus_sabaeus
ENSXCOG00000014185	polr1c	61	68.868	ENSCHOG00000006601	POLR1C	100	68.868	Choloepus_hoffmanni
ENSXCOG00000014185	polr1c	99	75.434	ENSCPBG00000025203	POLR1C	99	75.434	Chrysemys_picta_bellii
ENSXCOG00000014185	polr1c	97	54.867	ENSCING00000003563	-	97	54.867	Ciona_intestinalis
ENSXCOG00000014185	polr1c	58	30.233	ENSCSAVG00000002167	-	72	30.233	Ciona_savignyi
ENSXCOG00000014185	polr1c	100	72.989	ENSCANG00000043167	POLR1C	100	72.989	Colobus_angolensis_palliatus
ENSXCOG00000014185	polr1c	100	72.701	ENSCGRG00001017533	Polr1c	100	72.701	Cricetulus_griseus_chok1gshd
ENSXCOG00000014185	polr1c	86	73.000	ENSCGRG00000013225	Polr1c	100	73.000	Cricetulus_griseus_crigri
ENSXCOG00000014185	polr1c	100	84.483	ENSCSEG00000018097	polr1c	100	84.483	Cynoglossus_semilaevis
ENSXCOG00000014185	polr1c	66	89.130	ENSCVAG00000005684	polr1c	92	89.130	Cyprinodon_variegatus
ENSXCOG00000014185	polr1c	100	80.460	ENSDARG00000039400	polr1c	96	80.460	Danio_rerio
ENSXCOG00000014185	polr1c	100	72.701	ENSDNOG00000042693	POLR1C	100	72.701	Dasypus_novemcinctus
ENSXCOG00000014185	polr1c	100	73.563	ENSDORG00000000429	Polr1c	100	73.563	Dipodomys_ordii
ENSXCOG00000014185	polr1c	90	52.229	FBgn0031657	CG3756	93	52.229	Drosophila_melanogaster
ENSXCOG00000014185	polr1c	99	69.452	ENSETEG00000010807	POLR1C	99	69.452	Echinops_telfairi
ENSXCOG00000014185	polr1c	97	67.656	ENSEBUG00000013725	polr1c	97	67.656	Eptatretus_burgeri
ENSXCOG00000014185	polr1c	100	73.276	ENSEASG00005003338	POLR1C	100	73.276	Equus_asinus_asinus
ENSXCOG00000014185	polr1c	100	73.276	ENSECAG00000023516	POLR1C	98	73.276	Equus_caballus
ENSXCOG00000014185	polr1c	99	73.988	ENSEEUG00000005471	POLR1C	99	73.988	Erinaceus_europaeus
ENSXCOG00000014185	polr1c	100	80.460	ENSELUG00000013027	polr1c	100	80.460	Esox_lucius
ENSXCOG00000014185	polr1c	100	73.276	ENSFCAG00000009735	POLR1C	100	73.276	Felis_catus
ENSXCOG00000014185	polr1c	93	72.222	ENSFALG00000012111	POLR1C	100	72.222	Ficedula_albicollis
ENSXCOG00000014185	polr1c	100	74.425	ENSFDAG00000008428	POLR1C	100	74.425	Fukomys_damarensis
ENSXCOG00000014185	polr1c	100	81.034	ENSFHEG00000000262	polr1c	100	81.609	Fundulus_heteroclitus
ENSXCOG00000014185	polr1c	93	80.615	ENSGMOG00000013878	polr1c	100	80.615	Gadus_morhua
ENSXCOG00000014185	polr1c	100	73.276	ENSGALG00000010349	POLR1C	100	73.276	Gallus_gallus
ENSXCOG00000014185	polr1c	100	97.151	ENSGAFG00000010153	polr1c	100	97.151	Gambusia_affinis
ENSXCOG00000014185	polr1c	100	82.906	ENSGACG00000002453	polr1c	100	83.761	Gasterosteus_aculeatus
ENSXCOG00000014185	polr1c	99	74.927	ENSGAGG00000010640	POLR1C	99	74.927	Gopherus_agassizii
ENSXCOG00000014185	polr1c	100	73.276	ENSGGOG00000010903	POLR1C	100	73.276	Gorilla_gorilla
ENSXCOG00000014185	polr1c	100	80.460	ENSHBUG00000017816	polr1c	100	80.460	Haplochromis_burtoni
ENSXCOG00000014185	polr1c	55	30.256	ENSHBUG00000023040	polr2c	78	30.256	Haplochromis_burtoni
ENSXCOG00000014185	polr1c	100	73.563	ENSHGLG00000019441	POLR1C	100	73.563	Heterocephalus_glaber_female
ENSXCOG00000014185	polr1c	100	73.851	ENSHGLG00100005970	POLR1C	100	73.851	Heterocephalus_glaber_male
ENSXCOG00000014185	polr1c	99	79.656	ENSHCOG00000002179	polr1c	99	79.656	Hippocampus_comes
ENSXCOG00000014185	polr1c	99	81.214	ENSIPUG00000024464	polr1c	99	81.214	Ictalurus_punctatus
ENSXCOG00000014185	polr1c	100	73.563	ENSSTOG00000010631	POLR1C	100	73.563	Ictidomys_tridecemlineatus
ENSXCOG00000014185	polr1c	60	30.556	ENSSTOG00000015150	-	50	30.556	Ictidomys_tridecemlineatus
ENSXCOG00000014185	polr1c	100	73.563	ENSJJAG00000023110	Polr1c	100	73.563	Jaculus_jaculus
ENSXCOG00000014185	polr1c	100	89.744	ENSKMAG00000014305	polr1c	97	90.598	Kryptolebias_marmoratus
ENSXCOG00000014185	polr1c	100	86.040	ENSLBEG00000014925	polr1c	100	86.895	Labrus_bergylta
ENSXCOG00000014185	polr1c	95	59.760	ENSLACG00000012567	POLR1C	98	59.760	Latimeria_chalumnae
ENSXCOG00000014185	polr1c	100	78.736	ENSLOCG00000016710	polr1c	96	78.736	Lepisosteus_oculatus
ENSXCOG00000014185	polr1c	63	30.396	ENSLAFG00000027230	POLR2C	78	30.396	Loxodonta_africana
ENSXCOG00000014185	polr1c	86	73.841	ENSLAFG00000026248	POLR1C	100	73.841	Loxodonta_africana
ENSXCOG00000014185	polr1c	100	72.701	ENSMFAG00000046295	POLR1C	100	72.701	Macaca_fascicularis
ENSXCOG00000014185	polr1c	100	72.701	ENSMMUG00000015192	POLR1C	100	72.701	Macaca_mulatta
ENSXCOG00000014185	polr1c	100	72.701	ENSMNEG00000028073	POLR1C	100	72.701	Macaca_nemestrina
ENSXCOG00000014185	polr1c	100	72.701	ENSMLEG00000034818	POLR1C	100	72.701	Mandrillus_leucophaeus
ENSXCOG00000014185	polr1c	100	88.034	ENSMAMG00000008700	polr1c	100	88.034	Mastacembelus_armatus
ENSXCOG00000014185	polr1c	100	87.464	ENSMZEG00005018545	polr1c	100	88.319	Maylandia_zebra
ENSXCOG00000014185	polr1c	84	69.178	ENSMGAG00000011020	POLR1C	100	69.178	Meleagris_gallopavo
ENSXCOG00000014185	polr1c	100	72.701	ENSMAUG00000014329	Polr1c	100	72.701	Mesocricetus_auratus
ENSXCOG00000014185	polr1c	100	72.126	ENSMICG00000005027	POLR1C	99	73.226	Microcebus_murinus
ENSXCOG00000014185	polr1c	59	30.841	ENSMOCG00000013652	Polr2c	73	30.841	Microtus_ochrogaster
ENSXCOG00000014185	polr1c	100	73.276	ENSMOCG00000017549	Polr1c	100	73.276	Microtus_ochrogaster
ENSXCOG00000014185	polr1c	100	69.828	ENSMMOG00000005380	polr1c	100	70.402	Mola_mola
ENSXCOG00000014185	polr1c	84	73.630	ENSMODG00000018964	POLR1C	100	73.630	Monodelphis_domestica
ENSXCOG00000014185	polr1c	100	75.000	ENSMALG00000011711	polr1c	100	75.575	Monopterus_albus
ENSXCOG00000014185	polr1c	100	64.368	MGP_CAROLIEiJ_G0021662	Polr1c	100	71.648	Mus_caroli
ENSXCOG00000014185	polr1c	100	72.989	ENSMUSG00000067148	Polr1c	99	75.728	Mus_musculus
ENSXCOG00000014185	polr1c	100	73.563	MGP_PahariEiJ_G0020654	Polr1c	99	76.699	Mus_pahari
ENSXCOG00000014185	polr1c	100	72.989	MGP_SPRETEiJ_G0022574	Polr1c	99	75.728	Mus_spretus
ENSXCOG00000014185	polr1c	100	73.276	ENSMPUG00000012916	POLR1C	91	73.276	Mustela_putorius_furo
ENSXCOG00000014185	polr1c	100	73.563	ENSMLUG00000017751	POLR1C	99	73.563	Myotis_lucifugus
ENSXCOG00000014185	polr1c	100	73.276	ENSNGAG00000023487	Polr1c	100	73.276	Nannospalax_galili
ENSXCOG00000014185	polr1c	100	87.464	ENSNBRG00000018742	polr1c	100	88.319	Neolamprologus_brichardi
ENSXCOG00000014185	polr1c	100	72.989	ENSNLEG00000004035	POLR1C	100	72.989	Nomascus_leucogenys
ENSXCOG00000014185	polr1c	99	62.428	ENSMEUG00000006778	POLR1C	99	62.428	Notamacropus_eugenii
ENSXCOG00000014185	polr1c	78	74.074	ENSOPRG00000000145	POLR1C	100	74.074	Ochotona_princeps
ENSXCOG00000014185	polr1c	100	74.425	ENSODEG00000015831	-	100	74.425	Octodon_degus
ENSXCOG00000014185	polr1c	62	70.968	ENSODEG00000017109	-	99	70.968	Octodon_degus
ENSXCOG00000014185	polr1c	100	88.034	ENSONIG00000013133	polr1c	98	88.889	Oreochromis_niloticus
ENSXCOG00000014185	polr1c	99	71.098	ENSOANG00000003043	POLR1C	99	71.098	Ornithorhynchus_anatinus
ENSXCOG00000014185	polr1c	100	72.414	ENSOCUG00000005504	POLR1C	99	72.414	Oryctolagus_cuniculus
ENSXCOG00000014185	polr1c	99	85.591	ENSORLG00000019743	polr1c	99	85.591	Oryzias_latipes
ENSXCOG00000014185	polr1c	99	86.167	ENSORLG00020006489	POLR1C	99	86.167	Oryzias_latipes_hni
ENSXCOG00000014185	polr1c	77	66.176	ENSORLG00020005555	polr1c	81	66.176	Oryzias_latipes_hni
ENSXCOG00000014185	polr1c	99	85.303	ENSORLG00015013322	polr1c	99	85.303	Oryzias_latipes_hsok
ENSXCOG00000014185	polr1c	99	85.549	ENSOMEG00000016527	polr1c	99	85.549	Oryzias_melastigma
ENSXCOG00000014185	polr1c	99	72.622	ENSOGAG00000016318	POLR1C	99	72.622	Otolemur_garnettii
ENSXCOG00000014185	polr1c	100	73.276	ENSOARG00000007503	POLR1C	100	73.276	Ovis_aries
ENSXCOG00000014185	polr1c	100	73.276	ENSPPAG00000043678	POLR1C	100	73.276	Pan_paniscus
ENSXCOG00000014185	polr1c	100	73.563	ENSPPRG00000009760	POLR1C	100	73.563	Panthera_pardus
ENSXCOG00000014185	polr1c	100	73.563	ENSPTIG00000014813	POLR1C	100	73.563	Panthera_tigris_altaica
ENSXCOG00000014185	polr1c	100	73.276	ENSPTRG00000018202	POLR1C	100	73.276	Pan_troglodytes
ENSXCOG00000014185	polr1c	100	72.989	ENSPANG00000009025	POLR1C	99	72.989	Papio_anubis
ENSXCOG00000014185	polr1c	100	79.598	ENSPKIG00000009858	polr1c	100	79.598	Paramormyrops_kingsleyae
ENSXCOG00000014185	polr1c	99	74.566	ENSPSIG00000012580	POLR1C	94	74.566	Pelodiscus_sinensis
ENSXCOG00000014185	polr1c	56	30.000	ENSPMGG00000021249	polr2c	77	30.000	Periophthalmus_magnuspinnatus
ENSXCOG00000014185	polr1c	100	71.264	ENSPMGG00000012121	polr1c	100	71.839	Periophthalmus_magnuspinnatus
ENSXCOG00000014185	polr1c	100	72.701	ENSPEMG00000006970	Polr1c	100	72.701	Peromyscus_maniculatus_bairdii
ENSXCOG00000014185	polr1c	99	70.605	ENSPMAG00000005560	polr1c	99	70.605	Petromyzon_marinus
ENSXCOG00000014185	polr1c	55	33.831	ENSPMAG00000004827	polr2c	81	33.831	Petromyzon_marinus
ENSXCOG00000014185	polr1c	99	74.277	ENSPCIG00000028137	POLR1C	98	74.277	Phascolarctos_cinereus
ENSXCOG00000014185	polr1c	100	97.436	ENSPFOG00000014357	polr1c	98	97.436	Poecilia_formosa
ENSXCOG00000014185	polr1c	100	97.436	ENSPFOG00000014342	POLR1C	100	97.436	Poecilia_formosa
ENSXCOG00000014185	polr1c	61	98.585	ENSPLAG00000004111	polr1c	99	91.667	Poecilia_latipinna
ENSXCOG00000014185	polr1c	100	97.436	ENSPMEG00000008420	polr1c	100	97.436	Poecilia_mexicana
ENSXCOG00000014185	polr1c	100	97.436	ENSPMEG00000011877	-	100	97.436	Poecilia_mexicana
ENSXCOG00000014185	polr1c	100	97.701	ENSPREG00000007985	polr1c	100	97.701	Poecilia_reticulata
ENSXCOG00000014185	polr1c	100	72.989	ENSPPYG00000016645	POLR1C	100	72.989	Pongo_abelii
ENSXCOG00000014185	polr1c	100	71.839	ENSPCOG00000024628	POLR1C	100	71.839	Propithecus_coquereli
ENSXCOG00000014185	polr1c	100	68.103	ENSPVAG00000005689	POLR1C	100	68.103	Pteropus_vampyrus
ENSXCOG00000014185	polr1c	100	87.571	ENSPNYG00000003620	polr1c	100	88.319	Pundamilia_nyererei
ENSXCOG00000014185	polr1c	100	82.759	ENSPNAG00000008443	polr1c	100	82.759	Pygocentrus_nattereri
ENSXCOG00000014185	polr1c	100	72.701	ENSRNOG00000019079	Polr1c	100	72.701	Rattus_norvegicus
ENSXCOG00000014185	polr1c	100	73.276	ENSRBIG00000007155	POLR1C	100	73.276	Rhinopithecus_bieti
ENSXCOG00000014185	polr1c	100	72.989	ENSRROG00000000257	POLR1C	100	72.989	Rhinopithecus_roxellana
ENSXCOG00000014185	polr1c	92	48.287	YPR110C	RPC40	95	48.287	Saccharomyces_cerevisiae
ENSXCOG00000014185	polr1c	100	73.276	ENSSBOG00000025735	POLR1C	99	74.434	Saimiri_boliviensis_boliviensis
ENSXCOG00000014185	polr1c	99	66.763	ENSSHAG00000014456	POLR1C	99	66.763	Sarcophilus_harrisii
ENSXCOG00000014185	polr1c	100	81.609	ENSSFOG00015019860	polr1c	100	81.609	Scleropages_formosus
ENSXCOG00000014185	polr1c	100	87.644	ENSSMAG00000018865	polr1c	100	87.644	Scophthalmus_maximus
ENSXCOG00000014185	polr1c	100	88.604	ENSSDUG00000015745	polr1c	91	89.459	Seriola_dumerili
ENSXCOG00000014185	polr1c	100	88.319	ENSSLDG00000018285	polr1c	91	89.174	Seriola_lalandi_dorsalis
ENSXCOG00000014185	polr1c	99	72.595	ENSSPUG00000011822	POLR1C	99	72.595	Sphenodon_punctatus
ENSXCOG00000014185	polr1c	100	86.325	ENSSPAG00000022369	polr1c	100	87.179	Stegastes_partitus
ENSXCOG00000014185	polr1c	100	72.989	ENSSSCG00000028007	POLR1C	99	72.989	Sus_scrofa
ENSXCOG00000014185	polr1c	97	72.619	ENSTGUG00000009159	POLR1C	99	72.619	Taeniopygia_guttata
ENSXCOG00000014185	polr1c	100	82.906	ENSTRUG00000006264	polr1c	100	82.906	Takifugu_rubripes
ENSXCOG00000014185	polr1c	51	71.910	ENSTBEG00000002254	POLR1C	100	71.910	Tupaia_belangeri
ENSXCOG00000014185	polr1c	76	70.076	ENSTTRG00000006344	POLR1C	76	70.076	Tursiops_truncatus
ENSXCOG00000014185	polr1c	100	73.563	ENSUAMG00000025602	POLR1C	100	73.563	Ursus_americanus
ENSXCOG00000014185	polr1c	100	73.563	ENSUMAG00000005938	POLR1C	100	73.563	Ursus_maritimus
ENSXCOG00000014185	polr1c	100	70.690	ENSVVUG00000028922	POLR1C	100	70.690	Vulpes_vulpes
ENSXCOG00000014185	polr1c	100	67.622	ENSXETG00000010882	polr1c	100	67.622	Xenopus_tropicalis
ENSXCOG00000014185	polr1c	100	98.575	ENSXMAG00000015076	polr1c	100	98.575	Xiphophorus_maculatus