EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000014202 (Gene tree)
Gene ID: -
Gene Symbol: chd5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 15633 bases
Position: chrKQ557213.1:21979187-21994819
Accession: ZDB-GENE-120314-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000018867	ResIII	PF04851.15	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000019103	-	3393	-	ENSXCOP00000018867	1130 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000014202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000014202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000014202	chd5	93	72.332	ENSXCOG00000000809	chd3	90	72.233
ENSXCOG00000014202	chd5	93	68.470	ENSXCOG00000019269	-	59	69.418

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000014202	chd5	99	83.871	ENSG00000116254	CHD5	75	92.771	Homo_sapiens
ENSXCOG00000014202	chd5	95	83.871	ENSAMEG00000009880	CHD5	57	83.871	Ailuropoda_melanoleuca
ENSXCOG00000014202	chd5	98	93.284	ENSACIG00000012582	chd5	60	93.278	Amphilophus_citrinellus
ENSXCOG00000014202	chd5	98	91.899	ENSAOCG00000020356	chd5	56	93.034	Amphiprion_ocellaris
ENSXCOG00000014202	chd5	95	82.857	ENSAPLG00000015475	CHD5	59	82.857	Anas_platyrhynchos
ENSXCOG00000014202	chd5	80	87.097	ENSACAG00000002441	CHD5	56	87.097	Anolis_carolinensis
ENSXCOG00000014202	chd5	91	83.871	ENSANAG00000001078	CHD5	56	83.871	Aotus_nancymaae
ENSXCOG00000014202	chd5	98	91.429	ENSACLG00000003012	chd5	62	91.429	Astatotilapia_calliptera
ENSXCOG00000014202	chd5	91	86.804	ENSAMXG00000008921	chd5	62	87.500	Astyanax_mexicanus
ENSXCOG00000014202	chd5	94	83.871	ENSBTAG00000040477	CHD5	60	83.871	Bos_taurus
ENSXCOG00000014202	chd5	95	83.871	ENSCJAG00000000101	CHD5	56	83.871	Callithrix_jacchus
ENSXCOG00000014202	chd5	94	83.871	ENSCAFG00000019545	CHD5	85	81.195	Canis_familiaris
ENSXCOG00000014202	chd5	95	83.871	ENSCAFG00020008689	CHD5	56	83.871	Canis_lupus_dingo
ENSXCOG00000014202	chd5	99	83.871	ENSCHIG00000015027	CHD5	57	83.871	Capra_hircus
ENSXCOG00000014202	chd5	99	83.871	ENSTSYG00000033991	CHD5	56	83.871	Carlito_syrichta
ENSXCOG00000014202	chd5	94	83.871	ENSCAPG00000009294	CHD5	58	83.871	Cavia_aperea
ENSXCOG00000014202	chd5	94	83.871	ENSCPOG00000025080	CHD5	58	83.871	Cavia_porcellus
ENSXCOG00000014202	chd5	95	83.871	ENSCCAG00000024756	CHD5	86	75.187	Cebus_capucinus
ENSXCOG00000014202	chd5	94	83.871	ENSCATG00000043011	CHD5	57	83.871	Cercocebus_atys
ENSXCOG00000014202	chd5	95	83.871	ENSCLAG00000010589	CHD5	58	83.871	Chinchilla_lanigera
ENSXCOG00000014202	chd5	99	83.871	ENSCSAG00000000733	CHD5	56	83.871	Chlorocebus_sabaeus
ENSXCOG00000014202	chd5	94	83.871	ENSCPBG00000019363	CHD5	59	83.871	Chrysemys_picta_bellii
ENSXCOG00000014202	chd5	99	83.871	ENSCANG00000032302	CHD5	56	83.871	Colobus_angolensis_palliatus
ENSXCOG00000014202	chd5	93	79.007	ENSCGRG00001011042	Chd5	98	80.532	Cricetulus_griseus_chok1gshd
ENSXCOG00000014202	chd5	99	83.871	ENSCGRG00000011341	Chd5	60	83.871	Cricetulus_griseus_crigri
ENSXCOG00000014202	chd5	94	76.667	ENSDARG00000025789	chd4b	57	76.667	Danio_rerio
ENSXCOG00000014202	chd5	99	84.711	ENSDARG00000105083	chd5	55	88.370	Danio_rerio
ENSXCOG00000014202	chd5	99	83.871	ENSDNOG00000046342	CHD5	56	83.871	Dasypus_novemcinctus
ENSXCOG00000014202	chd5	99	83.871	ENSDORG00000005923	Chd5	58	83.871	Dipodomys_ordii
ENSXCOG00000014202	chd5	99	83.871	ENSEASG00005021464	CHD5	64	84.848	Equus_asinus_asinus
ENSXCOG00000014202	chd5	99	83.871	ENSECAG00000025043	CHD5	65	83.871	Equus_caballus
ENSXCOG00000014202	chd5	99	85.093	ENSELUG00000010742	chd5	63	85.175	Esox_lucius
ENSXCOG00000014202	chd5	95	83.871	ENSFCAG00000006319	CHD5	56	83.871	Felis_catus
ENSXCOG00000014202	chd5	95	83.871	ENSFALG00000009740	CHD5	56	83.871	Ficedula_albicollis
ENSXCOG00000014202	chd5	99	83.871	ENSFDAG00000012881	CHD5	57	83.871	Fukomys_damarensis
ENSXCOG00000014202	chd5	95	82.857	ENSGALG00000000747	CHD5	56	82.857	Gallus_gallus
ENSXCOG00000014202	chd5	97	89.260	ENSGACG00000004389	chd5	95	89.350	Gasterosteus_aculeatus
ENSXCOG00000014202	chd5	95	83.871	ENSGAGG00000001590	CHD5	86	79.061	Gopherus_agassizii
ENSXCOG00000014202	chd5	99	83.871	ENSGGOG00000000708	CHD5	83	77.565	Gorilla_gorilla
ENSXCOG00000014202	chd5	98	91.429	ENSHBUG00000013453	chd5	61	91.429	Haplochromis_burtoni
ENSXCOG00000014202	chd5	95	83.871	ENSHGLG00000018184	CHD5	58	83.871	Heterocephalus_glaber_female
ENSXCOG00000014202	chd5	95	83.871	ENSHGLG00100013261	CHD5	55	83.871	Heterocephalus_glaber_male
ENSXCOG00000014202	chd5	95	87.453	ENSIPUG00000005446	chd5	84	88.365	Ictalurus_punctatus
ENSXCOG00000014202	chd5	99	83.871	ENSSTOG00000002778	CHD5	58	83.871	Ictidomys_tridecemlineatus
ENSXCOG00000014202	chd5	99	83.871	ENSJJAG00000019072	Chd5	59	83.871	Jaculus_jaculus
ENSXCOG00000014202	chd5	63	85.395	ENSLACG00000022233	-	99	84.180	Latimeria_chalumnae
ENSXCOG00000014202	chd5	95	86.023	ENSLOCG00000004944	chd5	55	87.035	Lepisosteus_oculatus
ENSXCOG00000014202	chd5	99	83.871	ENSLAFG00000006348	CHD5	62	83.871	Loxodonta_africana
ENSXCOG00000014202	chd5	99	83.871	ENSMFAG00000033993	CHD5	60	83.871	Macaca_fascicularis
ENSXCOG00000014202	chd5	99	83.871	ENSMMUG00000016838	CHD5	57	83.871	Macaca_mulatta
ENSXCOG00000014202	chd5	99	83.871	ENSMNEG00000040044	CHD5	56	83.871	Macaca_nemestrina
ENSXCOG00000014202	chd5	99	83.871	ENSMLEG00000039166	CHD5	58	83.871	Mandrillus_leucophaeus
ENSXCOG00000014202	chd5	98	91.429	ENSMZEG00005000841	chd5	61	91.429	Maylandia_zebra
ENSXCOG00000014202	chd5	95	83.871	ENSMGAG00000001055	CHD5	56	83.871	Meleagris_gallopavo
ENSXCOG00000014202	chd5	95	83.871	ENSMICG00000017862	CHD5	58	83.871	Microcebus_murinus
ENSXCOG00000014202	chd5	99	83.871	ENSMOCG00000011049	Chd5	59	83.871	Microtus_ochrogaster
ENSXCOG00000014202	chd5	98	92.112	ENSMALG00000002831	chd5	60	92.098	Monopterus_albus
ENSXCOG00000014202	chd5	99	83.871	MGP_CAROLIEiJ_G0026857	Chd5	58	83.871	Mus_caroli
ENSXCOG00000014202	chd5	94	83.871	ENSMUSG00000005045	Chd5	59	83.871	Mus_musculus
ENSXCOG00000014202	chd5	99	83.871	MGP_PahariEiJ_G0029205	Chd5	59	83.871	Mus_pahari
ENSXCOG00000014202	chd5	99	83.871	MGP_SPRETEiJ_G0027850	Chd5	59	83.871	Mus_spretus
ENSXCOG00000014202	chd5	99	83.871	ENSMPUG00000007122	CHD5	55	83.871	Mustela_putorius_furo
ENSXCOG00000014202	chd5	99	83.871	ENSNGAG00000019812	Chd5	57	83.871	Nannospalax_galili
ENSXCOG00000014202	chd5	99	83.871	ENSNLEG00000010320	CHD5	88	77.008	Nomascus_leucogenys
ENSXCOG00000014202	chd5	95	83.871	ENSODEG00000010262	CHD5	58	83.871	Octodon_degus
ENSXCOG00000014202	chd5	98	91.429	ENSONIG00000000619	chd5	59	91.429	Oreochromis_niloticus
ENSXCOG00000014202	chd5	94	82.857	ENSOANG00000001819	CHD5	56	82.857	Ornithorhynchus_anatinus
ENSXCOG00000014202	chd5	96	83.871	ENSOGAG00000005703	CHD5	56	83.871	Otolemur_garnettii
ENSXCOG00000014202	chd5	99	83.871	ENSOARG00000013425	CHD5	57	83.871	Ovis_aries
ENSXCOG00000014202	chd5	99	83.871	ENSPPAG00000034048	CHD5	57	83.871	Pan_paniscus
ENSXCOG00000014202	chd5	95	83.871	ENSPPRG00000009453	CHD5	57	83.871	Panthera_pardus
ENSXCOG00000014202	chd5	95	83.871	ENSPTIG00000013926	CHD5	55	83.871	Panthera_tigris_altaica
ENSXCOG00000014202	chd5	99	83.871	ENSPTRG00000000075	CHD5	56	83.871	Pan_troglodytes
ENSXCOG00000014202	chd5	99	83.871	ENSPANG00000006765	CHD5	56	83.871	Papio_anubis
ENSXCOG00000014202	chd5	95	87.252	ENSPKIG00000004282	chd5	62	86.194	Paramormyrops_kingsleyae
ENSXCOG00000014202	chd5	95	83.871	ENSPSIG00000006414	CHD5	58	83.871	Pelodiscus_sinensis
ENSXCOG00000014202	chd5	98	77.748	ENSPEMG00000014799	Chd5	86	79.606	Peromyscus_maniculatus_bairdii
ENSXCOG00000014202	chd5	95	83.871	ENSPCIG00000028310	CHD5	57	83.871	Phascolarctos_cinereus
ENSXCOG00000014202	chd5	99	95.085	ENSPLAG00000005343	chd5	61	95.085	Poecilia_latipinna
ENSXCOG00000014202	chd5	99	83.871	ENSPPYG00000001952	CHD5	59	83.871	Pongo_abelii
ENSXCOG00000014202	chd5	95	83.871	ENSPCOG00000022930	CHD5	56	83.871	Propithecus_coquereli
ENSXCOG00000014202	chd5	98	92.081	ENSPNYG00000003183	chd5	59	92.272	Pundamilia_nyererei
ENSXCOG00000014202	chd5	99	83.871	ENSRNOG00000011268	Chd5	59	83.871	Rattus_norvegicus
ENSXCOG00000014202	chd5	95	83.871	ENSRBIG00000032140	CHD5	57	83.871	Rhinopithecus_bieti
ENSXCOG00000014202	chd5	99	83.871	ENSRROG00000041146	CHD5	56	83.871	Rhinopithecus_roxellana
ENSXCOG00000014202	chd5	88	85.731	ENSSBOG00000001955	CHD5	56	84.361	Saimiri_boliviensis_boliviensis
ENSXCOG00000014202	chd5	93	79.833	ENSSHAG00000018641	CHD5	58	80.766	Sarcophilus_harrisii
ENSXCOG00000014202	chd5	99	85.714	ENSSFOG00015006296	chd5	62	85.714	Scleropages_formosus
ENSXCOG00000014202	chd5	98	92.844	ENSSDUG00000017526	chd5	65	91.606	Seriola_dumerili
ENSXCOG00000014202	chd5	98	75.579	ENSSPUG00000010622	CHD5	57	76.764	Sphenodon_punctatus
ENSXCOG00000014202	chd5	95	83.871	ENSSSCG00000003366	CHD5	60	83.871	Sus_scrofa
ENSXCOG00000014202	chd5	95	81.250	ENSTGUG00000002634	-	61	83.871	Taeniopygia_guttata
ENSXCOG00000014202	chd5	89	88.363	ENSTNIG00000004346	chd5	99	88.276	Tetraodon_nigroviridis
ENSXCOG00000014202	chd5	95	83.871	ENSTTRG00000010468	CHD5	56	83.871	Tursiops_truncatus
ENSXCOG00000014202	chd5	99	83.871	ENSUAMG00000024509	CHD5	89	79.171	Ursus_americanus
ENSXCOG00000014202	chd5	99	83.871	ENSUMAG00000024173	CHD5	86	75.612	Ursus_maritimus
ENSXCOG00000014202	chd5	95	83.871	ENSVVUG00000026480	CHD5	62	83.871	Vulpes_vulpes
ENSXCOG00000014202	chd5	99	84.375	ENSXETG00000002904	chd5	61	84.375	Xenopus_tropicalis