EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000014232 (Gene tree)
Gene ID: -
Gene Symbol: hltf
Alias: smarca3|wu:fc33f07
Full Name: helicase-like transcription factor
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 8247 bases
Position: chrKQ557211.1:18279558-18287804
Accession: ZDB-GENE-030131-3306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000018918	ResIII	PF04851.15	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000019155	-	2187	-	ENSXCOP00000018918	728 (aa)	-	-
ENSXCOT00000019156	-	1107	-	ENSXCOP00000018919	368 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000014232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000014232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000014232	hltf	60	41.216	ENSXCOG00000011494	ercc6l	71	41.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000014232	hltf	100	80.621	ENSFHEG00000017298	hltf	95	80.621	Fundulus_heteroclitus
ENSXCOG00000014232	hltf	100	75.091	ENSORLG00015017166	hltf	96	75.453	Oryzias_latipes_hsok
ENSXCOG00000014232	hltf	95	57.356	ENSSHAG00000000533	HLTF	84	57.356	Sarcophilus_harrisii