EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000014367 (Gene tree)
Gene ID
-
Gene Symbol
scrt2
Alias
fc69h09|wu:fc69h09|zgc:162551
Full Name
scratch family zinc finger 2
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
5216 bases
Position
chrKQ557201.1:23342044-23347259
Accession
ZDB-GENE-030131-4097
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000019119zf-C2H2PF00096.262.8e-2514
ENSXCOP00000019119zf-C2H2PF00096.262.8e-2524
ENSXCOP00000019119zf-C2H2PF00096.262.8e-2534
ENSXCOP00000019119zf-C2H2PF00096.262.8e-2544
ENSXCOP00000019119zf-metPF12874.77.8e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000019356-924-ENSXCOP00000019119307 (aa)--
Gene Model
Click here to download ENSXCOG00000014367's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000014367's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000014367scrt25336.296ENSXCOG00000009768-7536.296
ENSXCOG00000014367scrt25741.892ENSXCOG00000007994-8841.892
ENSXCOG00000014367scrt25637.594ENSXCOG00000013004-7237.838
ENSXCOG00000014367scrt25133.835ENSXCOG00000003435-8333.835
ENSXCOG00000014367scrt25137.500ENSXCOG00000013870-7237.500
ENSXCOG00000014367scrt25042.574ENSXCOG00000003484-5342.574
ENSXCOG00000014367scrt29959.935ENSXCOG00000019861-10059.935
ENSXCOG00000014367scrt25440.909ENSXCOG00000007376-9340.909
ENSXCOG00000014367scrt26236.184ENSXCOG00000008567prdm55136.735
ENSXCOG00000014367scrt25535.821ENSXCOG00000007529-9144.643
ENSXCOG00000014367scrt25035.172ENSXCOG00000003472-7845.455
ENSXCOG00000014367scrt25742.202ENSXCOG00000003537-7542.593
ENSXCOG00000014367scrt25040.152ENSXCOG00000007396-8440.152
ENSXCOG00000014367scrt25236.634ENSXCOG00000003538-9835.075
ENSXCOG00000014367scrt25339.655ENSXCOG00000019401-8939.655
ENSXCOG00000014367scrt25041.509ENSXCOG00000008978-9141.509
ENSXCOG00000014367scrt25750.000ENSXCOG00000015084snai25655.782
ENSXCOG00000014367scrt25139.604ENSXCOG00000019484-8339.604
ENSXCOG00000014367scrt25238.095ENSXCOG00000016567-7538.095
ENSXCOG00000014367scrt25036.765ENSXCOG00000013787-5336.765
ENSXCOG00000014367scrt27037.778ENSXCOG00000001200-8946.939
ENSXCOG00000014367scrt25433.813ENSXCOG00000009794-7538.679
ENSXCOG00000014367scrt25144.737ENSXCOG00000016860-9540.196
ENSXCOG00000014367scrt29537.736ENSXCOG00000013213-10037.736
ENSXCOG00000014367scrt25343.750ENSXCOG00000007981-8340.506
ENSXCOG00000014367scrt26242.593ENSXCOG00000001116-8938.739
ENSXCOG00000014367scrt25036.066ENSXCOG00000007957-8336.552
ENSXCOG00000014367scrt25135.821ENSXCOG00000003532-7439.216
ENSXCOG00000014367scrt26940.244ENSXCOG00000003530-8040.244
ENSXCOG00000014367scrt26142.222ENSXCOG00000010567-8844.828
ENSXCOG00000014367scrt25241.379ENSXCOG00000007414-8441.379
ENSXCOG00000014367scrt27638.636ENSXCOG00000008116-9140.157
ENSXCOG00000014367scrt25637.405ENSXCOG00000007406-9737.405
ENSXCOG00000014367scrt26331.206ENSXCOG00000003441-5334.586
ENSXCOG00000014367scrt29668.581ENSXCOG00000019675scrt1b9668.581
ENSXCOG00000014367scrt26135.294ENSXCOG00000003093-8435.294
ENSXCOG00000014367scrt25042.105ENSXCOG00000015441-8342.105
ENSXCOG00000014367scrt25138.182ENSXCOG00000019377-9338.182
ENSXCOG00000014367scrt25740.000ENSXCOG00000007941-8541.026
ENSXCOG00000014367scrt25037.778ENSXCOG00000018253-9537.778
ENSXCOG00000014367scrt25636.111ENSXCOG00000009772-8836.111
ENSXCOG00000014367scrt25139.850ENSXCOG00000019443-9540.323
ENSXCOG00000014367scrt25136.893ENSXCOG00000019492-8436.893
ENSXCOG00000014367scrt25042.308ENSXCOG00000019382-7642.308
ENSXCOG00000014367scrt25739.098ENSXCOG00000011725-9839.098
ENSXCOG00000014367scrt25032.903ENSXCOG00000014363-5535.556
ENSXCOG00000014367scrt27536.111ENSXCOG00000008083-10036.111
ENSXCOG00000014367scrt25434.586ENSXCOG00000010259-7234.586
ENSXCOG00000014367scrt25339.706ENSXCOG00000001226-8840.625
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000014367scrt29669.257ENSAPOG00000009279scrt1b9668.243Acanthochromis_polyacanthus
ENSXCOG00000014367scrt29762.416ENSAPOG00000015197-9762.416Acanthochromis_polyacanthus
ENSXCOG00000014367scrt210090.596ENSAPOG00000003680scrt210090.596Acanthochromis_polyacanthus
ENSXCOG00000014367scrt29665.772ENSACIG00000013613scrt1b9665.878Amphilophus_citrinellus
ENSXCOG00000014367scrt29761.812ENSACIG00000006586-9761.812Amphilophus_citrinellus
ENSXCOG00000014367scrt210084.142ENSACIG00000012604scrt210084.142Amphilophus_citrinellus
ENSXCOG00000014367scrt210059.877ENSACIG00000001296-10060.185Amphilophus_citrinellus
ENSXCOG00000014367scrt29669.257ENSAOCG00000003910scrt1b9668.243Amphiprion_ocellaris
ENSXCOG00000014367scrt29761.489ENSAOCG00000023304-9761.489Amphiprion_ocellaris
ENSXCOG00000014367scrt210090.596ENSAOCG00000021557scrt210090.596Amphiprion_ocellaris
ENSXCOG00000014367scrt210090.596ENSAPEG00000022558scrt210090.596Amphiprion_percula
ENSXCOG00000014367scrt29761.489ENSAPEG00000005677-9761.489Amphiprion_percula
ENSXCOG00000014367scrt29669.257ENSAPEG00000000869scrt1b9668.243Amphiprion_percula
ENSXCOG00000014367scrt29668.919ENSATEG00000002302scrt1b9668.919Anabas_testudineus
ENSXCOG00000014367scrt210089.028ENSATEG00000023998scrt210089.028Anabas_testudineus
ENSXCOG00000014367scrt29763.880ENSATEG00000011660-9763.880Anabas_testudineus
ENSXCOG00000014367scrt210059.697ENSATEG00000003195-10059.697Anabas_testudineus
ENSXCOG00000014367scrt27771.489ENSACAG00000016109SCRT29571.489Anolis_carolinensis
ENSXCOG00000014367scrt29761.342ENSACLG00000012046-9761.342Astatotilapia_calliptera
ENSXCOG00000014367scrt29667.905ENSACLG00000007162scrt1b9667.905Astatotilapia_calliptera
ENSXCOG00000014367scrt29766.107ENSAMXG00000042624SCRT19866.107Astyanax_mexicanus
ENSXCOG00000014367scrt28681.648ENSAMXG00000034158scrt29081.648Astyanax_mexicanus
ENSXCOG00000014367scrt29767.677ENSAMXG00000038085scrt1a9767.677Astyanax_mexicanus
ENSXCOG00000014367scrt25956.667WBGene00000468ces-15955.000Caenorhabditis_elegans
ENSXCOG00000014367scrt28760.584ENSCPBG00000027613SCRT210060.584Chrysemys_picta_bellii
ENSXCOG00000014367scrt29767.114ENSCPBG00000018899SCRT19767.114Chrysemys_picta_bellii
ENSXCOG00000014367scrt210084.953ENSCSEG00000021542scrt210084.953Cynoglossus_semilaevis
ENSXCOG00000014367scrt29761.489ENSCSEG00000014892-9761.489Cynoglossus_semilaevis
ENSXCOG00000014367scrt29668.013ENSCSEG00000008596scrt1b9668.013Cynoglossus_semilaevis
ENSXCOG00000014367scrt29961.635ENSCVAG00000003190-10061.635Cyprinodon_variegatus
ENSXCOG00000014367scrt210092.790ENSCVAG00000021038scrt210092.790Cyprinodon_variegatus
ENSXCOG00000014367scrt29668.687ENSCVAG00000009561scrt1b9668.687Cyprinodon_variegatus
ENSXCOG00000014367scrt29767.340ENSDARG00000040214scrt1b9767.340Danio_rerio
ENSXCOG00000014367scrt29767.003ENSDARG00000100821scrt1a9767.003Danio_rerio
ENSXCOG00000014367scrt210080.982ENSELUG00000023883scrt210082.209Esox_lucius
ENSXCOG00000014367scrt29768.013ENSELUG00000005435scrt1b9668.013Esox_lucius
ENSXCOG00000014367scrt29667.568ENSELUG00000022228scrt1a9667.568Esox_lucius
ENSXCOG00000014367scrt28365.759ENSFALG00000005718SCRT29766.926Ficedula_albicollis
ENSXCOG00000014367scrt29761.812ENSFHEG00000009794-9761.812Fundulus_heteroclitus
ENSXCOG00000014367scrt29668.013ENSFHEG00000014820scrt1b9668.013Fundulus_heteroclitus
ENSXCOG00000014367scrt210088.599ENSFHEG00000005732scrt210088.599Fundulus_heteroclitus
ENSXCOG00000014367scrt29973.252ENSGMOG00000019519scrt29973.252Gadus_morhua
ENSXCOG00000014367scrt29667.230ENSGMOG00000000629scrt1b9667.230Gadus_morhua
ENSXCOG00000014367scrt29761.616ENSGALG00000028912SCRT29762.290Gallus_gallus
ENSXCOG00000014367scrt29960.586ENSGAFG00000009650-10060.586Gambusia_affinis
ENSXCOG00000014367scrt29668.581ENSGAFG00000007636scrt1b9668.581Gambusia_affinis
ENSXCOG00000014367scrt210098.697ENSGAFG00000003093scrt210098.697Gambusia_affinis
ENSXCOG00000014367scrt29665.763ENSGACG00000008982scrt1b9665.763Gasterosteus_aculeatus
ENSXCOG00000014367scrt29761.438ENSGACG00000004072-9761.438Gasterosteus_aculeatus
ENSXCOG00000014367scrt29765.772ENSGAGG00000011736SCRT19865.772Gopherus_agassizii
ENSXCOG00000014367scrt210062.541ENSGAGG00000020761SCRT210062.541Gopherus_agassizii
ENSXCOG00000014367scrt26972.986ENSGAGG00000020760-7472.986Gopherus_agassizii
ENSXCOG00000014367scrt29667.905ENSHBUG00000016621scrt1b9667.905Haplochromis_burtoni
ENSXCOG00000014367scrt210090.282ENSHBUG00000012492scrt210090.282Haplochromis_burtoni
ENSXCOG00000014367scrt29761.489ENSHBUG00000019101-9761.489Haplochromis_burtoni
ENSXCOG00000014367scrt29667.568ENSHCOG00000016704scrt1b9667.568Hippocampus_comes
ENSXCOG00000014367scrt210086.364ENSHCOG00000008116scrt210086.364Hippocampus_comes
ENSXCOG00000014367scrt29761.873ENSHCOG00000016179-9762.542Hippocampus_comes
ENSXCOG00000014367scrt29768.013ENSIPUG00000004551scrt1a9768.013Ictalurus_punctatus
ENSXCOG00000014367scrt29764.310ENSIPUG00000005547-9864.310Ictalurus_punctatus
ENSXCOG00000014367scrt29960.692ENSKMAG00000009489-10060.692Kryptolebias_marmoratus
ENSXCOG00000014367scrt210090.282ENSKMAG00000018087scrt210090.282Kryptolebias_marmoratus
ENSXCOG00000014367scrt29668.687ENSKMAG00000005484scrt1b9668.687Kryptolebias_marmoratus
ENSXCOG00000014367scrt29761.364ENSLBEG00000023388-9761.364Labrus_bergylta
ENSXCOG00000014367scrt210089.062ENSLBEG00000015419scrt210089.062Labrus_bergylta
ENSXCOG00000014367scrt29767.677ENSLACG00000003588SCRT19667.677Latimeria_chalumnae
ENSXCOG00000014367scrt210060.736ENSLOCG00000002246scrt210060.559Lepisosteus_oculatus
ENSXCOG00000014367scrt29768.013ENSLOCG00000007573scrt1b9768.013Lepisosteus_oculatus
ENSXCOG00000014367scrt210089.342ENSMAMG00000001291scrt210089.342Mastacembelus_armatus
ENSXCOG00000014367scrt29668.243ENSMAMG00000011698scrt1b9668.243Mastacembelus_armatus
ENSXCOG00000014367scrt29667.905ENSMZEG00005005627scrt1b9667.905Maylandia_zebra
ENSXCOG00000014367scrt29761.489ENSMZEG00005026702-9761.489Maylandia_zebra
ENSXCOG00000014367scrt210090.282ENSMZEG00005026445scrt210090.282Maylandia_zebra
ENSXCOG00000014367scrt28366.406ENSMGAG00000016579SCRT29767.188Meleagris_gallopavo
ENSXCOG00000014367scrt29761.613ENSMMOG00000018345-9761.613Mola_mola
ENSXCOG00000014367scrt29668.013ENSMMOG00000003327scrt1b9667.003Mola_mola
ENSXCOG00000014367scrt29988.365ENSMMOG00000009272scrt29988.679Mola_mola
ENSXCOG00000014367scrt210083.388ENSMALG00000013656scrt210083.388Monopterus_albus
ENSXCOG00000014367scrt29668.581ENSMALG00000012704scrt1b9668.581Monopterus_albus
ENSXCOG00000014367scrt25178.981ENSNGAG00000020815Scrt27281.208Nannospalax_galili
ENSXCOG00000014367scrt29761.489ENSNBRG00000014882-9761.489Neolamprologus_brichardi
ENSXCOG00000014367scrt29666.330ENSNBRG00000013983scrt1b9666.330Neolamprologus_brichardi
ENSXCOG00000014367scrt210085.668ENSNBRG00000007221scrt210085.668Neolamprologus_brichardi
ENSXCOG00000014367scrt29667.905ENSONIG00000006007scrt1b10065.472Oreochromis_niloticus
ENSXCOG00000014367scrt210089.969ENSONIG00000016758scrt210089.969Oreochromis_niloticus
ENSXCOG00000014367scrt29759.568ENSONIG00000019809-10059.568Oreochromis_niloticus
ENSXCOG00000014367scrt29961.489ENSONIG00000003152-10061.489Oreochromis_niloticus
ENSXCOG00000014367scrt29668.243ENSORLG00000025651scrt1b9668.687Oryzias_latipes
ENSXCOG00000014367scrt29959.375ENSORLG00000022825-10059.375Oryzias_latipes
ENSXCOG00000014367scrt210089.969ENSORLG00000024051scrt210089.969Oryzias_latipes
ENSXCOG00000014367scrt210089.969ENSORLG00020011478scrt210089.969Oryzias_latipes_hni
ENSXCOG00000014367scrt29668.243ENSORLG00020012967scrt1b9668.687Oryzias_latipes_hni
ENSXCOG00000014367scrt29959.375ENSORLG00015010104-10059.375Oryzias_latipes_hsok
ENSXCOG00000014367scrt29668.243ENSORLG00015019165scrt1b9668.687Oryzias_latipes_hsok
ENSXCOG00000014367scrt210089.969ENSORLG00015005524scrt210089.969Oryzias_latipes_hsok
ENSXCOG00000014367scrt29960.883ENSOMEG00000000286-10060.883Oryzias_melastigma
ENSXCOG00000014367scrt29668.243ENSOMEG00000003925scrt1b9668.687Oryzias_melastigma
ENSXCOG00000014367scrt210089.969ENSOMEG00000002661scrt210089.969Oryzias_melastigma
ENSXCOG00000014367scrt29767.340ENSPKIG00000020085scrt1a9767.340Paramormyrops_kingsleyae
ENSXCOG00000014367scrt29768.350ENSPKIG00000022303SCRT19768.350Paramormyrops_kingsleyae
ENSXCOG00000014367scrt29762.829ENSPMGG00000021402-9762.829Periophthalmus_magnuspinnatus
ENSXCOG00000014367scrt210079.870ENSPMGG00000016561scrt210079.870Periophthalmus_magnuspinnatus
ENSXCOG00000014367scrt29666.554ENSPMGG00000002260scrt1b9666.554Periophthalmus_magnuspinnatus
ENSXCOG00000014367scrt29668.581ENSPFOG00000017719scrt1b9668.581Poecilia_formosa
ENSXCOG00000014367scrt210093.417ENSPFOG00000007738scrt210093.417Poecilia_formosa
ENSXCOG00000014367scrt29960.127ENSPFOG00000005616-10060.063Poecilia_formosa
ENSXCOG00000014367scrt29668.581ENSPLAG00000009876scrt1b9668.581Poecilia_latipinna
ENSXCOG00000014367scrt29960.127ENSPLAG00000011718-10060.063Poecilia_latipinna
ENSXCOG00000014367scrt210090.554ENSPLAG00000005765scrt210090.554Poecilia_latipinna
ENSXCOG00000014367scrt29668.581ENSPMEG00000013274scrt1b9668.581Poecilia_mexicana
ENSXCOG00000014367scrt210090.554ENSPMEG00000001538scrt210090.554Poecilia_mexicana
ENSXCOG00000014367scrt29960.127ENSPMEG00000011706-10060.063Poecilia_mexicana
ENSXCOG00000014367scrt29668.581ENSPREG00000018985scrt1b9668.581Poecilia_reticulata
ENSXCOG00000014367scrt210093.103ENSPREG00000001147scrt210093.103Poecilia_reticulata
ENSXCOG00000014367scrt29960.127ENSPREG00000012166-10060.127Poecilia_reticulata
ENSXCOG00000014367scrt29667.905ENSPNYG00000017733scrt1b9667.905Pundamilia_nyererei
ENSXCOG00000014367scrt29761.489ENSPNYG00000008865-9761.489Pundamilia_nyererei
ENSXCOG00000014367scrt210085.668ENSPNYG00000013109scrt210085.668Pundamilia_nyererei
ENSXCOG00000014367scrt29766.107ENSPNAG00000027880-9866.107Pygocentrus_nattereri
ENSXCOG00000014367scrt29768.013ENSPNAG00000017415scrt1a9768.013Pygocentrus_nattereri
ENSXCOG00000014367scrt29767.003ENSSFOG00015001195SCRT19767.003Scleropages_formosus
ENSXCOG00000014367scrt29760.064ENSSMAG00000005122-9760.064Scophthalmus_maximus
ENSXCOG00000014367scrt29667.677ENSSMAG00000019207scrt1b9667.677Scophthalmus_maximus
ENSXCOG00000014367scrt29761.889ENSSDUG00000013215-9761.889Seriola_dumerili
ENSXCOG00000014367scrt29691.216ENSSDUG00000001637scrt29590.541Seriola_dumerili
ENSXCOG00000014367scrt29668.581ENSSDUG00000007752scrt1b9668.581Seriola_dumerili
ENSXCOG00000014367scrt29668.581ENSSLDG00000017166scrt1b9668.581Seriola_lalandi_dorsalis
ENSXCOG00000014367scrt210089.655ENSSLDG00000013565scrt210089.655Seriola_lalandi_dorsalis
ENSXCOG00000014367scrt29761.889ENSSLDG00000016454-9761.889Seriola_lalandi_dorsalis
ENSXCOG00000014367scrt29764.094ENSSPUG00000018637SCRT29764.094Sphenodon_punctatus
ENSXCOG00000014367scrt29668.581ENSSPAG00000002200scrt1b9668.581Stegastes_partitus
ENSXCOG00000014367scrt210086.319ENSSPAG00000014018scrt210086.319Stegastes_partitus
ENSXCOG00000014367scrt29761.812ENSSPAG00000006788-9761.812Stegastes_partitus
ENSXCOG00000014367scrt28365.625ENSTGUG00000006801SCRT29966.797Taeniopygia_guttata
ENSXCOG00000014367scrt29989.216ENSTRUG00000007620scrt29989.216Takifugu_rubripes
ENSXCOG00000014367scrt28463.424ENSTRUG00000019558-7963.813Takifugu_rubripes
ENSXCOG00000014367scrt29666.780ENSTRUG00000011637scrt1b9766.780Takifugu_rubripes
ENSXCOG00000014367scrt29761.165ENSTRUG00000012719-9761.489Takifugu_rubripes
ENSXCOG00000014367scrt29666.780ENSTNIG00000018384scrt1b9666.780Tetraodon_nigroviridis
ENSXCOG00000014367scrt29987.107ENSTNIG00000012473scrt210086.601Tetraodon_nigroviridis
ENSXCOG00000014367scrt29668.581ENSXMAG00000027885scrt1b9668.581Xiphophorus_maculatus
ENSXCOG00000014367scrt210094.044ENSXMAG00000028567scrt210094.044Xiphophorus_maculatus
ENSXCOG00000014367scrt29959.810ENSXMAG00000015353-10059.748Xiphophorus_maculatus

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