EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000014400 (Gene tree)
Gene ID: -
Gene Symbol: zgc:56699
Alias: -
Full Name: zgc:56699
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2861 bases
Position: chrKQ557201.1:23581487-23584347
Accession: ZDB-GENE-040426-2099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000019156	zf-U11-48K	PF05253.12	5.1e-19	1	2
ENSXCOP00000019156	zf-U11-48K	PF05253.12	5.1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000019393	-	555	-	ENSXCOP00000019156	184 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000014400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000014400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000014400	zgc:56699	70	71.212	ENSAPOG00000000311	-	80	71.212	Acanthochromis_polyacanthus
ENSXCOG00000014400	zgc:56699	89	54.494	ENSAPOG00000021951	-	100	54.494	Acanthochromis_polyacanthus
ENSXCOG00000014400	zgc:56699	87	64.943	ENSACIG00000013400	zgc:56699	97	64.943	Amphilophus_citrinellus
ENSXCOG00000014400	zgc:56699	86	55.747	ENSAOCG00000013650	-	98	55.747	Amphiprion_ocellaris
ENSXCOG00000014400	zgc:56699	87	51.553	ENSAPEG00000006689	zgc:56699	97	51.553	Amphiprion_percula
ENSXCOG00000014400	zgc:56699	87	67.429	ENSATEG00000024058	zgc:56699	97	67.429	Anabas_testudineus
ENSXCOG00000014400	zgc:56699	91	61.290	ENSACLG00000023562	zgc:56699	94	61.290	Astatotilapia_calliptera
ENSXCOG00000014400	zgc:56699	86	49.718	ENSAMXG00000038346	zgc:56699	98	49.718	Astyanax_mexicanus
ENSXCOG00000014400	zgc:56699	76	44.654	ENSAMXG00000036095	-	66	46.541	Astyanax_mexicanus
ENSXCOG00000014400	zgc:56699	90	58.564	ENSCSEG00000021520	zgc:56699	86	58.564	Cynoglossus_semilaevis
ENSXCOG00000014400	zgc:56699	70	70.677	ENSCVAG00000009972	zgc:56699	74	70.677	Cyprinodon_variegatus
ENSXCOG00000014400	zgc:56699	81	44.048	ENSDARG00000099586	CR382383.2	94	44.048	Danio_rerio
ENSXCOG00000014400	zgc:56699	86	45.856	ENSDARG00000000887	zgc:56699	99	45.856	Danio_rerio
ENSXCOG00000014400	zgc:56699	57	45.455	ENSEBUG00000005577	-	57	45.455	Eptatretus_burgeri
ENSXCOG00000014400	zgc:56699	63	37.931	ENSEBUG00000000411	-	65	37.931	Eptatretus_burgeri
ENSXCOG00000014400	zgc:56699	86	52.222	ENSELUG00000003242	gtsf1	99	52.222	Esox_lucius
ENSXCOG00000014400	zgc:56699	89	69.663	ENSFHEG00000006036	zgc:56699	99	65.031	Fundulus_heteroclitus
ENSXCOG00000014400	zgc:56699	72	53.030	ENSGMOG00000007295	zgc:56699	98	53.030	Gadus_morhua
ENSXCOG00000014400	zgc:56699	60	42.478	ENSGALG00000035365	-	64	42.478	Gallus_gallus
ENSXCOG00000014400	zgc:56699	89	86.592	ENSGAFG00000020743	zgc:56699	100	86.592	Gambusia_affinis
ENSXCOG00000014400	zgc:56699	85	62.644	ENSHBUG00000005327	zgc:56699	97	62.644	Haplochromis_burtoni
ENSXCOG00000014400	zgc:56699	86	47.458	ENSHCOG00000010296	-	100	47.458	Hippocampus_comes
ENSXCOG00000014400	zgc:56699	86	45.198	ENSIPUG00000011498	zgc:56699	95	45.198	Ictalurus_punctatus
ENSXCOG00000014400	zgc:56699	91	63.587	ENSLBEG00000015981	zgc:56699	97	61.538	Labrus_bergylta
ENSXCOG00000014400	zgc:56699	68	45.390	ENSLOCG00000004469	zgc:56699	97	45.390	Lepisosteus_oculatus
ENSXCOG00000014400	zgc:56699	89	58.427	ENSMAMG00000001846	zgc:56699	99	58.427	Mastacembelus_armatus
ENSXCOG00000014400	zgc:56699	91	61.290	ENSMZEG00005026479	zgc:56699	94	61.290	Maylandia_zebra
ENSXCOG00000014400	zgc:56699	74	58.219	ENSMMOG00000017331	zgc:56699	79	58.219	Mola_mola
ENSXCOG00000014400	zgc:56699	85	62.069	ENSNBRG00000006336	zgc:56699	97	62.069	Neolamprologus_brichardi
ENSXCOG00000014400	zgc:56699	85	63.218	ENSONIG00000016720	zgc:56699	89	63.218	Oreochromis_niloticus
ENSXCOG00000014400	zgc:56699	53	38.384	ENSOANG00000030381	-	64	38.384	Ornithorhynchus_anatinus
ENSXCOG00000014400	zgc:56699	86	51.176	ENSORLG00000015258	-	97	51.176	Oryzias_latipes
ENSXCOG00000014400	zgc:56699	70	64.062	ENSORLG00000025877	-	75	64.062	Oryzias_latipes
ENSXCOG00000014400	zgc:56699	70	64.062	ENSORLG00020011013	-	75	64.062	Oryzias_latipes_hni
ENSXCOG00000014400	zgc:56699	86	50.588	ENSORLG00020010990	-	97	50.588	Oryzias_latipes_hni
ENSXCOG00000014400	zgc:56699	86	52.353	ENSORLG00015004961	zgc:56699	97	52.353	Oryzias_latipes_hsok
ENSXCOG00000014400	zgc:56699	85	54.070	ENSOMEG00000021773	-	96	54.070	Oryzias_melastigma
ENSXCOG00000014400	zgc:56699	87	50.877	ENSOMEG00000021739	-	97	50.877	Oryzias_melastigma
ENSXCOG00000014400	zgc:56699	69	56.693	ENSOMEG00000013200	-	81	56.693	Oryzias_melastigma
ENSXCOG00000014400	zgc:56699	86	46.328	ENSPKIG00000017039	zgc:56699	99	46.328	Paramormyrops_kingsleyae
ENSXCOG00000014400	zgc:56699	88	65.060	ENSPMGG00000023241	zgc:56699	98	65.060	Periophthalmus_magnuspinnatus
ENSXCOG00000014400	zgc:56699	54	46.154	ENSPMAG00000009653	-	81	46.154	Petromyzon_marinus
ENSXCOG00000014400	zgc:56699	89	82.682	ENSPFOG00000009204	zgc:56699	100	82.682	Poecilia_formosa
ENSXCOG00000014400	zgc:56699	90	86.628	ENSPLAG00000009088	zgc:56699	100	86.628	Poecilia_latipinna
ENSXCOG00000014400	zgc:56699	89	82.682	ENSPMEG00000001443	zgc:56699	100	82.682	Poecilia_mexicana
ENSXCOG00000014400	zgc:56699	89	84.916	ENSPREG00000000745	zgc:56699	100	84.916	Poecilia_reticulata
ENSXCOG00000014400	zgc:56699	85	62.644	ENSPNYG00000002811	zgc:56699	97	62.644	Pundamilia_nyererei
ENSXCOG00000014400	zgc:56699	86	51.397	ENSPNAG00000005165	zgc:56699	99	51.397	Pygocentrus_nattereri
ENSXCOG00000014400	zgc:56699	84	47.647	ENSSFOG00015021600	zgc:56699	94	47.647	Scleropages_formosus
ENSXCOG00000014400	zgc:56699	85	59.763	ENSSMAG00000020886	zgc:56699	95	59.763	Scophthalmus_maximus
ENSXCOG00000014400	zgc:56699	87	64.571	ENSSDUG00000002033	zgc:56699	97	64.571	Seriola_dumerili
ENSXCOG00000014400	zgc:56699	87	64.571	ENSSLDG00000014113	zgc:56699	97	64.571	Seriola_lalandi_dorsalis
ENSXCOG00000014400	zgc:56699	87	61.176	ENSSPAG00000019854	-	99	61.176	Stegastes_partitus
ENSXCOG00000014400	zgc:56699	72	60.584	ENSSPAG00000010005	-	87	60.584	Stegastes_partitus
ENSXCOG00000014400	zgc:56699	84	57.059	ENSTRUG00000015537	zgc:56699	95	57.059	Takifugu_rubripes
ENSXCOG00000014400	zgc:56699	70	63.281	ENSTNIG00000012515	zgc:56699	85	63.281	Tetraodon_nigroviridis
ENSXCOG00000014400	zgc:56699	89	89.385	ENSXMAG00000011692	zgc:56699	100	89.385	Xiphophorus_maculatus