EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000014499 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 1648 bases
Position: chrKQ557220.1:21505404-21507051
Accession: ZDB-GENE-080926-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000019277	EXOSC1	PF10447.9	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000019515	-	393	-	ENSXCOP00000019277	130 (aa)	-	-
ENSXCOT00000019516	-	339	-	ENSXCOP00000019278	112 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000014499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000014499's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000014499	exosc1	92	84.167	ENSG00000171311	EXOSC1	71	84.167	Homo_sapiens
ENSXCOG00000014499	exosc1	93	90.083	ENSAPOG00000007822	exosc1	62	90.083	Acanthochromis_polyacanthus
ENSXCOG00000014499	exosc1	92	85.000	ENSAMEG00000000129	EXOSC1	62	85.000	Ailuropoda_melanoleuca
ENSXCOG00000014499	exosc1	93	89.256	ENSACIG00000018956	exosc1	59	89.256	Amphilophus_citrinellus
ENSXCOG00000014499	exosc1	93	89.256	ENSAOCG00000010699	exosc1	62	89.256	Amphiprion_ocellaris
ENSXCOG00000014499	exosc1	93	73.554	ENSAPEG00000012690	exosc1	61	73.554	Amphiprion_percula
ENSXCOG00000014499	exosc1	93	89.256	ENSATEG00000018683	exosc1	62	89.256	Anabas_testudineus
ENSXCOG00000014499	exosc1	92	80.833	ENSACAG00000002101	EXOSC1	62	80.833	Anolis_carolinensis
ENSXCOG00000014499	exosc1	92	85.000	ENSANAG00000034669	EXOSC1	71	85.000	Aotus_nancymaae
ENSXCOG00000014499	exosc1	93	90.083	ENSACLG00000021243	exosc1	62	90.083	Astatotilapia_calliptera
ENSXCOG00000014499	exosc1	93	89.256	ENSAMXG00000011116	exosc1	62	89.256	Astyanax_mexicanus
ENSXCOG00000014499	exosc1	92	85.000	ENSBTAG00000012699	EXOSC1	62	85.000	Bos_taurus
ENSXCOG00000014499	exosc1	88	33.913	WBGene00012966	exos-1	55	33.913	Caenorhabditis_elegans
ENSXCOG00000014499	exosc1	92	84.167	ENSCJAG00000016586	EXOSC1	71	84.167	Callithrix_jacchus
ENSXCOG00000014499	exosc1	92	85.000	ENSCAFG00000009068	EXOSC1	58	85.000	Canis_familiaris
ENSXCOG00000014499	exosc1	92	85.000	ENSCAFG00020006002	EXOSC1	58	85.000	Canis_lupus_dingo
ENSXCOG00000014499	exosc1	92	85.000	ENSCHIG00000015253	EXOSC1	62	85.000	Capra_hircus
ENSXCOG00000014499	exosc1	92	85.000	ENSTSYG00000000760	EXOSC1	71	85.000	Carlito_syrichta
ENSXCOG00000014499	exosc1	92	85.000	ENSCPOG00000001173	EXOSC1	62	85.000	Cavia_porcellus
ENSXCOG00000014499	exosc1	90	39.496	ENSCCAG00000023986	EXOSC1	57	45.161	Cebus_capucinus
ENSXCOG00000014499	exosc1	92	84.167	ENSCATG00000034114	EXOSC1	71	84.167	Cercocebus_atys
ENSXCOG00000014499	exosc1	92	85.000	ENSCLAG00000002463	EXOSC1	62	85.000	Chinchilla_lanigera
ENSXCOG00000014499	exosc1	92	83.333	ENSCSAG00000005870	EXOSC1	62	83.333	Chlorocebus_sabaeus
ENSXCOG00000014499	exosc1	87	84.071	ENSCHOG00000006477	EXOSC1	60	84.071	Choloepus_hoffmanni
ENSXCOG00000014499	exosc1	94	58.197	ENSCING00000022734	-	58	58.197	Ciona_intestinalis
ENSXCOG00000014499	exosc1	94	60.656	ENSCSAVG00000010865	-	62	60.656	Ciona_savignyi
ENSXCOG00000014499	exosc1	92	84.167	ENSCANG00000034159	EXOSC1	71	84.167	Colobus_angolensis_palliatus
ENSXCOG00000014499	exosc1	92	84.167	ENSCGRG00001000335	Exosc1	62	84.167	Cricetulus_griseus_chok1gshd
ENSXCOG00000014499	exosc1	92	84.167	ENSCGRG00000011602	Exosc1	62	84.167	Cricetulus_griseus_crigri
ENSXCOG00000014499	exosc1	93	89.256	ENSCSEG00000007895	exosc1	69	89.256	Cynoglossus_semilaevis
ENSXCOG00000014499	exosc1	93	99.174	ENSCVAG00000016748	exosc1	62	99.174	Cyprinodon_variegatus
ENSXCOG00000014499	exosc1	93	87.603	ENSDARG00000059841	exosc1	62	87.603	Danio_rerio
ENSXCOG00000014499	exosc1	92	85.000	ENSDORG00000016528	Exosc1	62	85.000	Dipodomys_ordii
ENSXCOG00000014499	exosc1	85	56.522	FBgn0032346	Csl4	55	56.522	Drosophila_melanogaster
ENSXCOG00000014499	exosc1	92	84.167	ENSETEG00000002469	-	62	84.167	Echinops_telfairi
ENSXCOG00000014499	exosc1	92	69.167	ENSEBUG00000008164	exosc1	60	69.167	Eptatretus_burgeri
ENSXCOG00000014499	exosc1	93	84.298	ENSEASG00005008684	EXOSC1	64	84.298	Equus_asinus_asinus
ENSXCOG00000014499	exosc1	92	85.000	ENSEEUG00000005647	EXOSC1	62	85.000	Erinaceus_europaeus
ENSXCOG00000014499	exosc1	93	89.256	ENSELUG00000017369	exosc1	70	83.471	Esox_lucius
ENSXCOG00000014499	exosc1	92	85.000	ENSFCAG00000040563	EXOSC1	71	85.000	Felis_catus
ENSXCOG00000014499	exosc1	92	80.000	ENSFALG00000008450	EXOSC1	62	80.000	Ficedula_albicollis
ENSXCOG00000014499	exosc1	92	85.000	ENSFDAG00000000846	EXOSC1	62	85.000	Fukomys_damarensis
ENSXCOG00000014499	exosc1	93	100.000	ENSFHEG00000009154	exosc1	62	100.000	Fundulus_heteroclitus
ENSXCOG00000014499	exosc1	93	88.430	ENSGMOG00000008993	exosc1	62	88.430	Gadus_morhua
ENSXCOG00000014499	exosc1	96	78.400	ENSGALG00000039917	EXOSC1	89	78.400	Gallus_gallus
ENSXCOG00000014499	exosc1	93	99.174	ENSGAFG00000010265	exosc1	68	99.174	Gambusia_affinis
ENSXCOG00000014499	exosc1	93	87.603	ENSGACG00000018936	exosc1	62	87.603	Gasterosteus_aculeatus
ENSXCOG00000014499	exosc1	92	81.667	ENSGAGG00000019192	EXOSC1	62	81.667	Gopherus_agassizii
ENSXCOG00000014499	exosc1	92	84.167	ENSGGOG00000003099	EXOSC1	71	84.167	Gorilla_gorilla
ENSXCOG00000014499	exosc1	93	90.083	ENSHBUG00000017857	exosc1	63	90.083	Haplochromis_burtoni
ENSXCOG00000014499	exosc1	92	84.167	ENSHGLG00000016927	EXOSC1	62	84.167	Heterocephalus_glaber_female
ENSXCOG00000014499	exosc1	92	84.167	ENSHGLG00100012208	EXOSC1	62	84.167	Heterocephalus_glaber_male
ENSXCOG00000014499	exosc1	93	87.603	ENSHCOG00000019882	exosc1	62	87.603	Hippocampus_comes
ENSXCOG00000014499	exosc1	93	88.430	ENSIPUG00000007685	exosc1	62	88.430	Ictalurus_punctatus
ENSXCOG00000014499	exosc1	92	85.000	ENSSTOG00000006615	EXOSC1	62	85.000	Ictidomys_tridecemlineatus
ENSXCOG00000014499	exosc1	92	85.000	ENSJJAG00000013311	Exosc1	62	85.000	Jaculus_jaculus
ENSXCOG00000014499	exosc1	93	90.083	ENSKMAG00000001202	exosc1	58	90.083	Kryptolebias_marmoratus
ENSXCOG00000014499	exosc1	93	90.083	ENSLBEG00000011448	exosc1	62	90.083	Labrus_bergylta
ENSXCOG00000014499	exosc1	68	78.947	ENSLOCG00000003776	exosc1	60	78.947	Lepisosteus_oculatus
ENSXCOG00000014499	exosc1	92	85.000	ENSLAFG00000015983	EXOSC1	62	85.000	Loxodonta_africana
ENSXCOG00000014499	exosc1	92	84.167	ENSMFAG00000001493	EXOSC1	71	84.167	Macaca_fascicularis
ENSXCOG00000014499	exosc1	92	84.167	ENSMMUG00000020028	EXOSC1	71	84.167	Macaca_mulatta
ENSXCOG00000014499	exosc1	92	84.167	ENSMNEG00000029816	EXOSC1	71	84.167	Macaca_nemestrina
ENSXCOG00000014499	exosc1	92	76.667	ENSMLEG00000027643	EXOSC1	61	76.667	Mandrillus_leucophaeus
ENSXCOG00000014499	exosc1	93	90.909	ENSMAMG00000012200	exosc1	62	90.909	Mastacembelus_armatus
ENSXCOG00000014499	exosc1	93	90.083	ENSMZEG00005007042	exosc1	62	90.083	Maylandia_zebra
ENSXCOG00000014499	exosc1	92	84.167	ENSMAUG00000020462	-	71	84.167	Mesocricetus_auratus
ENSXCOG00000014499	exosc1	92	85.000	ENSMICG00000007664	EXOSC1	71	85.000	Microcebus_murinus
ENSXCOG00000014499	exosc1	92	84.167	ENSMOCG00000006004	-	62	84.167	Microtus_ochrogaster
ENSXCOG00000014499	exosc1	92	78.333	ENSMOCG00000017124	-	60	78.333	Microtus_ochrogaster
ENSXCOG00000014499	exosc1	62	90.123	ENSMMOG00000021403	exosc1	54	90.123	Mola_mola
ENSXCOG00000014499	exosc1	92	85.124	ENSMODG00000004213	EXOSC1	62	85.124	Monodelphis_domestica
ENSXCOG00000014499	exosc1	93	89.256	ENSMALG00000007061	exosc1	61	89.256	Monopterus_albus
ENSXCOG00000014499	exosc1	92	84.167	MGP_CAROLIEiJ_G0022959	Exosc1	62	84.167	Mus_caroli
ENSXCOG00000014499	exosc1	92	84.167	ENSMUSG00000034321	Exosc1	62	84.167	Mus_musculus
ENSXCOG00000014499	exosc1	92	84.167	MGP_PahariEiJ_G0014449	Exosc1	62	84.167	Mus_pahari
ENSXCOG00000014499	exosc1	92	84.167	MGP_SPRETEiJ_G0023880	Exosc1	62	84.167	Mus_spretus
ENSXCOG00000014499	exosc1	92	85.000	ENSMPUG00000017044	EXOSC1	62	85.000	Mustela_putorius_furo
ENSXCOG00000014499	exosc1	92	85.000	ENSMLUG00000009228	EXOSC1	62	85.000	Myotis_lucifugus
ENSXCOG00000014499	exosc1	92	83.333	ENSNGAG00000022033	Exosc1	62	83.333	Nannospalax_galili
ENSXCOG00000014499	exosc1	62	90.123	ENSNBRG00000024007	exosc1	53	90.123	Neolamprologus_brichardi
ENSXCOG00000014499	exosc1	92	83.333	ENSNLEG00000013872	EXOSC1	71	83.333	Nomascus_leucogenys
ENSXCOG00000014499	exosc1	92	83.333	ENSOPRG00000005065	EXOSC1	62	83.333	Ochotona_princeps
ENSXCOG00000014499	exosc1	92	85.000	ENSODEG00000016709	EXOSC1	62	85.000	Octodon_degus
ENSXCOG00000014499	exosc1	93	89.256	ENSONIG00000017683	exosc1	62	89.256	Oreochromis_niloticus
ENSXCOG00000014499	exosc1	88	85.965	ENSOANG00000006563	EXOSC1	95	85.000	Ornithorhynchus_anatinus
ENSXCOG00000014499	exosc1	92	84.298	ENSOCUG00000011898	-	62	84.298	Oryctolagus_cuniculus
ENSXCOG00000014499	exosc1	92	79.167	ENSOCUG00000026461	-	62	79.167	Oryctolagus_cuniculus
ENSXCOG00000014499	exosc1	93	86.885	ENSORLG00000011595	exosc1	63	86.885	Oryzias_latipes
ENSXCOG00000014499	exosc1	93	86.885	ENSORLG00020005831	exosc1	63	86.885	Oryzias_latipes_hni
ENSXCOG00000014499	exosc1	93	86.885	ENSORLG00015004317	exosc1	63	86.885	Oryzias_latipes_hsok
ENSXCOG00000014499	exosc1	78	75.490	ENSOMEG00000013907	exosc1	53	75.490	Oryzias_melastigma
ENSXCOG00000014499	exosc1	92	84.167	ENSOGAG00000016259	EXOSC1	62	84.167	Otolemur_garnettii
ENSXCOG00000014499	exosc1	92	84.167	ENSOARG00000010136	EXOSC1	62	84.167	Ovis_aries
ENSXCOG00000014499	exosc1	92	76.230	ENSPPAG00000039842	EXOSC1	62	76.230	Pan_paniscus
ENSXCOG00000014499	exosc1	92	85.000	ENSPPRG00000023366	EXOSC1	71	85.000	Panthera_pardus
ENSXCOG00000014499	exosc1	92	85.000	ENSPTIG00000017701	EXOSC1	71	85.000	Panthera_tigris_altaica
ENSXCOG00000014499	exosc1	92	84.167	ENSPTRG00000002808	EXOSC1	71	84.167	Pan_troglodytes
ENSXCOG00000014499	exosc1	92	84.167	ENSPANG00000021324	EXOSC1	71	84.167	Papio_anubis
ENSXCOG00000014499	exosc1	93	89.256	ENSPKIG00000016037	exosc1	62	89.256	Paramormyrops_kingsleyae
ENSXCOG00000014499	exosc1	92	75.833	ENSPSIG00000013571	EXOSC1	97	75.000	Pelodiscus_sinensis
ENSXCOG00000014499	exosc1	93	91.736	ENSPMGG00000014002	exosc1	72	91.736	Periophthalmus_magnuspinnatus
ENSXCOG00000014499	exosc1	92	84.167	ENSPEMG00000010710	-	62	84.167	Peromyscus_maniculatus_bairdii
ENSXCOG00000014499	exosc1	94	73.016	ENSPMAG00000000195	exosc1	64	73.016	Petromyzon_marinus
ENSXCOG00000014499	exosc1	92	85.000	ENSPCIG00000002210	EXOSC1	61	85.000	Phascolarctos_cinereus
ENSXCOG00000014499	exosc1	93	100.000	ENSPFOG00000006755	exosc1	59	100.000	Poecilia_formosa
ENSXCOG00000014499	exosc1	93	100.000	ENSPLAG00000005880	exosc1	75	100.000	Poecilia_latipinna
ENSXCOG00000014499	exosc1	93	100.000	ENSPMEG00000015598	exosc1	68	100.000	Poecilia_mexicana
ENSXCOG00000014499	exosc1	93	99.174	ENSPREG00000000405	exosc1	68	99.174	Poecilia_reticulata
ENSXCOG00000014499	exosc1	92	84.167	ENSPPYG00000002531	EXOSC1	62	84.167	Pongo_abelii
ENSXCOG00000014499	exosc1	92	85.000	ENSPCAG00000009135	EXOSC1	62	85.000	Procavia_capensis
ENSXCOG00000014499	exosc1	92	76.667	ENSPCOG00000027539	EXOSC1	68	76.667	Propithecus_coquereli
ENSXCOG00000014499	exosc1	92	85.000	ENSPVAG00000003372	EXOSC1	62	85.000	Pteropus_vampyrus
ENSXCOG00000014499	exosc1	93	90.083	ENSPNYG00000021745	exosc1	71	90.083	Pundamilia_nyererei
ENSXCOG00000014499	exosc1	93	89.256	ENSPNAG00000001944	exosc1	72	89.256	Pygocentrus_nattereri
ENSXCOG00000014499	exosc1	92	84.167	ENSRNOG00000048708	Exosc1	62	84.167	Rattus_norvegicus
ENSXCOG00000014499	exosc1	92	84.167	ENSRBIG00000035618	EXOSC1	71	84.167	Rhinopithecus_bieti
ENSXCOG00000014499	exosc1	92	84.167	ENSRROG00000032589	EXOSC1	71	84.167	Rhinopithecus_roxellana
ENSXCOG00000014499	exosc1	92	85.000	ENSSBOG00000000359	EXOSC1	71	85.000	Saimiri_boliviensis_boliviensis
ENSXCOG00000014499	exosc1	92	85.124	ENSSHAG00000018219	EXOSC1	82	85.124	Sarcophilus_harrisii
ENSXCOG00000014499	exosc1	93	85.950	ENSSFOG00015016289	-	71	85.950	Scleropages_formosus
ENSXCOG00000014499	exosc1	93	89.256	ENSSFOG00015009069	exosc1	62	89.256	Scleropages_formosus
ENSXCOG00000014499	exosc1	93	89.256	ENSSMAG00000003721	exosc1	62	89.256	Scophthalmus_maximus
ENSXCOG00000014499	exosc1	93	89.256	ENSSDUG00000002993	exosc1	62	89.256	Seriola_dumerili
ENSXCOG00000014499	exosc1	93	89.256	ENSSLDG00000025181	exosc1	62	89.256	Seriola_lalandi_dorsalis
ENSXCOG00000014499	exosc1	92	84.167	ENSSARG00000000162	EXOSC1	62	84.167	Sorex_araneus
ENSXCOG00000014499	exosc1	92	78.333	ENSSPUG00000012263	EXOSC1	62	78.333	Sphenodon_punctatus
ENSXCOG00000014499	exosc1	92	85.000	ENSSSCG00000010518	EXOSC1	56	85.000	Sus_scrofa
ENSXCOG00000014499	exosc1	92	80.833	ENSTGUG00000009692	EXOSC1	62	80.833	Taeniopygia_guttata
ENSXCOG00000014499	exosc1	93	80.992	ENSTRUG00000007706	exosc1	63	80.992	Takifugu_rubripes
ENSXCOG00000014499	exosc1	93	80.645	ENSTNIG00000014079	exosc1	63	80.645	Tetraodon_nigroviridis
ENSXCOG00000014499	exosc1	95	80.488	ENSTBEG00000006011	EXOSC1	63	80.488	Tupaia_belangeri
ENSXCOG00000014499	exosc1	92	85.000	ENSTTRG00000009887	EXOSC1	65	85.000	Tursiops_truncatus
ENSXCOG00000014499	exosc1	62	83.750	ENSUAMG00000010266	EXOSC1	52	83.750	Ursus_americanus
ENSXCOG00000014499	exosc1	62	83.750	ENSUMAG00000022002	EXOSC1	52	83.750	Ursus_maritimus
ENSXCOG00000014499	exosc1	92	79.167	ENSXETG00000003434	exosc1	62	79.167	Xenopus_tropicalis
ENSXCOG00000014499	exosc1	93	100.000	ENSXMAG00000023382	exosc1	68	100.000	Xiphophorus_maculatus