EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000014529 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162396
Alias: fb62c07|si:ch211-31o18.2|wu:fb62c07
Full Name: zgc:162396
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2699 bases
Position: chrKQ557222.1:22822755-22825453
Accession: ZDB-GENE-030131-1190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000019317	Methyltransf_31	PF13847.6	1.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000019555	-	816	-	ENSXCOP00000019317	271 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000014529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000014529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000014529	zgc:162396	100	44.891	ENSXCOG00000014527	zgc:162780	99	44.891
ENSXCOG00000014529	zgc:162396	61	49.091	ENSXCOG00000020437	si:ch211-93g23.2	98	49.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000014529	zgc:162396	100	68.382	ENSAPOG00000015421	zgc:162396	100	68.382	Acanthochromis_polyacanthus
ENSXCOG00000014529	zgc:162396	100	73.897	ENSACIG00000015427	zgc:162396	100	73.897	Amphilophus_citrinellus
ENSXCOG00000014529	zgc:162396	100	70.588	ENSAOCG00000004131	zgc:162396	100	70.588	Amphiprion_ocellaris
ENSXCOG00000014529	zgc:162396	100	70.221	ENSAPEG00000008189	zgc:162396	100	70.221	Amphiprion_percula
ENSXCOG00000014529	zgc:162396	100	70.221	ENSATEG00000011813	zgc:162396	99	70.221	Anabas_testudineus
ENSXCOG00000014529	zgc:162396	98	41.573	ENSAPLG00000012593	-	99	41.573	Anas_platyrhynchos
ENSXCOG00000014529	zgc:162396	100	72.059	ENSACLG00000006906	zgc:162396	100	72.059	Astatotilapia_calliptera
ENSXCOG00000014529	zgc:162396	86	53.556	ENSAMXG00000037578	zgc:162396	93	53.333	Astyanax_mexicanus
ENSXCOG00000014529	zgc:162396	100	62.132	ENSAMXG00000030552	zgc:162396	100	62.132	Astyanax_mexicanus
ENSXCOG00000014529	zgc:162396	96	48.731	ENSCPBG00000002804	-	99	44.815	Chrysemys_picta_bellii
ENSXCOG00000014529	zgc:162396	99	32.721	ENSCING00000012960	-	99	32.721	Ciona_intestinalis
ENSXCOG00000014529	zgc:162396	73	31.188	ENSCING00000014393	-	87	31.188	Ciona_intestinalis
ENSXCOG00000014529	zgc:162396	99	87.454	ENSCVAG00000021429	zgc:162396	99	87.454	Cyprinodon_variegatus
ENSXCOG00000014529	zgc:162396	100	56.985	ENSDARG00000069549	zgc:162396	100	56.985	Danio_rerio
ENSXCOG00000014529	zgc:162396	99	63.469	ENSELUG00000005372	zgc:162396	99	63.469	Esox_lucius
ENSXCOG00000014529	zgc:162396	99	42.593	ENSFALG00000012826	-	99	42.593	Ficedula_albicollis
ENSXCOG00000014529	zgc:162396	99	84.871	ENSFHEG00000005224	-	99	84.871	Fundulus_heteroclitus
ENSXCOG00000014529	zgc:162396	99	42.222	ENSGALG00000050548	-	99	42.222	Gallus_gallus
ENSXCOG00000014529	zgc:162396	99	42.222	ENSGALG00000042073	-	99	42.222	Gallus_gallus
ENSXCOG00000014529	zgc:162396	99	42.222	ENSGALG00000047535	-	99	42.222	Gallus_gallus
ENSXCOG00000014529	zgc:162396	100	94.118	ENSGAFG00000018387	-	100	94.118	Gambusia_affinis
ENSXCOG00000014529	zgc:162396	99	70.111	ENSGACG00000002200	zgc:162396	96	70.111	Gasterosteus_aculeatus
ENSXCOG00000014529	zgc:162396	100	71.691	ENSHBUG00000017584	zgc:162396	100	71.691	Haplochromis_burtoni
ENSXCOG00000014529	zgc:162396	100	59.926	ENSIPUG00000001171	-	100	59.926	Ictalurus_punctatus
ENSXCOG00000014529	zgc:162396	100	59.559	ENSIPUG00000001213	-	100	59.559	Ictalurus_punctatus
ENSXCOG00000014529	zgc:162396	100	59.926	ENSIPUG00000001159	zgc:162396	100	59.926	Ictalurus_punctatus
ENSXCOG00000014529	zgc:162396	99	74.539	ENSKMAG00000018426	-	99	74.539	Kryptolebias_marmoratus
ENSXCOG00000014529	zgc:162396	100	71.691	ENSLBEG00000026502	zgc:162396	100	71.691	Labrus_bergylta
ENSXCOG00000014529	zgc:162396	100	44.853	ENSLACG00000009261	-	100	44.853	Latimeria_chalumnae
ENSXCOG00000014529	zgc:162396	100	72.426	ENSMAMG00000013213	zgc:162396	100	72.426	Mastacembelus_armatus
ENSXCOG00000014529	zgc:162396	100	72.059	ENSMZEG00005000798	zgc:162396	100	72.059	Maylandia_zebra
ENSXCOG00000014529	zgc:162396	99	41.026	ENSMGAG00000003269	-	99	41.026	Meleagris_gallopavo
ENSXCOG00000014529	zgc:162396	99	64.576	ENSMMOG00000005445	zgc:162396	99	64.576	Mola_mola
ENSXCOG00000014529	zgc:162396	100	72.426	ENSNBRG00000014954	zgc:162396	100	72.426	Neolamprologus_brichardi
ENSXCOG00000014529	zgc:162396	100	72.794	ENSONIG00000004463	zgc:162396	100	72.794	Oreochromis_niloticus
ENSXCOG00000014529	zgc:162396	99	44.444	ENSOANG00000021828	-	96	44.444	Ornithorhynchus_anatinus
ENSXCOG00000014529	zgc:162396	65	40.341	ENSOANG00000015675	-	99	40.341	Ornithorhynchus_anatinus
ENSXCOG00000014529	zgc:162396	61	66.061	ENSORLG00000018107	zgc:162396	96	66.061	Oryzias_latipes
ENSXCOG00000014529	zgc:162396	99	71.587	ENSORLG00015008543	zgc:162396	99	71.587	Oryzias_latipes_hsok
ENSXCOG00000014529	zgc:162396	99	71.587	ENSOMEG00000010640	zgc:162396	99	71.587	Oryzias_melastigma
ENSXCOG00000014529	zgc:162396	100	56.985	ENSPKIG00000014798	zgc:162396	100	56.985	Paramormyrops_kingsleyae
ENSXCOG00000014529	zgc:162396	99	43.333	ENSPSIG00000016701	-	99	43.333	Pelodiscus_sinensis
ENSXCOG00000014529	zgc:162396	88	39.076	ENSPMAG00000003743	zgc:162396	97	39.076	Petromyzon_marinus
ENSXCOG00000014529	zgc:162396	72	39.000	ENSPMAG00000004744	zgc:162396	84	39.000	Petromyzon_marinus
ENSXCOG00000014529	zgc:162396	72	41.500	ENSPMAG00000006166	zgc:162396	97	41.500	Petromyzon_marinus
ENSXCOG00000014529	zgc:162396	100	94.853	ENSPFOG00000002666	zgc:162396	100	94.853	Poecilia_formosa
ENSXCOG00000014529	zgc:162396	100	95.221	ENSPLAG00000010281	zgc:162396	100	95.221	Poecilia_latipinna
ENSXCOG00000014529	zgc:162396	100	95.588	ENSPMEG00000002349	zgc:162396	100	95.588	Poecilia_mexicana
ENSXCOG00000014529	zgc:162396	100	96.324	ENSPREG00000016491	zgc:162396	100	96.324	Poecilia_reticulata
ENSXCOG00000014529	zgc:162396	100	71.691	ENSPNYG00000009858	zgc:162396	100	71.691	Pundamilia_nyererei
ENSXCOG00000014529	zgc:162396	99	60.517	ENSPNAG00000004920	zgc:162396	100	60.517	Pygocentrus_nattereri
ENSXCOG00000014529	zgc:162396	100	61.765	ENSPNAG00000026074	zgc:162396	100	61.765	Pygocentrus_nattereri
ENSXCOG00000014529	zgc:162396	99	33.929	ENSSHAG00000000950	-	99	33.929	Sarcophilus_harrisii
ENSXCOG00000014529	zgc:162396	100	60.662	ENSSFOG00015023495	zgc:162396	100	60.662	Scleropages_formosus
ENSXCOG00000014529	zgc:162396	99	59.041	ENSSFOG00015023503	zgc:162396	99	59.041	Scleropages_formosus
ENSXCOG00000014529	zgc:162396	100	69.853	ENSSMAG00000004484	zgc:162396	100	69.853	Scophthalmus_maximus
ENSXCOG00000014529	zgc:162396	100	72.059	ENSSDUG00000010278	zgc:162396	100	72.059	Seriola_dumerili
ENSXCOG00000014529	zgc:162396	100	71.691	ENSSLDG00000021423	zgc:162396	100	71.691	Seriola_lalandi_dorsalis
ENSXCOG00000014529	zgc:162396	99	41.852	ENSSPUG00000015532	-	84	41.852	Sphenodon_punctatus
ENSXCOG00000014529	zgc:162396	100	68.750	ENSSPAG00000005505	zgc:162396	100	68.750	Stegastes_partitus
ENSXCOG00000014529	zgc:162396	99	42.222	ENSTGUG00000003861	-	100	42.222	Taeniopygia_guttata
ENSXCOG00000014529	zgc:162396	68	37.500	ENSTGUG00000015044	-	98	37.500	Taeniopygia_guttata
ENSXCOG00000014529	zgc:162396	100	56.250	ENSTRUG00000010648	-	99	56.250	Takifugu_rubripes
ENSXCOG00000014529	zgc:162396	99	62.825	ENSTRUG00000007506	zgc:162396	99	62.825	Takifugu_rubripes
ENSXCOG00000014529	zgc:162396	99	60.662	ENSTNIG00000001485	zgc:162396	100	60.662	Tetraodon_nigroviridis
ENSXCOG00000014529	zgc:162396	100	37.868	ENSXETG00000033236	-	97	37.868	Xenopus_tropicalis
ENSXCOG00000014529	zgc:162396	100	97.426	ENSXMAG00000023129	zgc:162396	100	97.426	Xiphophorus_maculatus