EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000014584 (Gene tree)
Gene ID: -
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3785 bases
Position: chrKQ557220.1:22441897-22445681
Accession: 11295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000019412	MMR_HSR1	PF01926.23	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000019650	SRL (1 of many)-201	1338	-	ENSXCOP00000019412	445 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000014584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000014584's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000014584	SRL	90	30.673	ENSXCOG00000001781	ehd1a	72	30.673
ENSXCOG00000014584	SRL	89	32.494	ENSXCOG00000008602	ehd2b	71	32.494
ENSXCOG00000014584	SRL	86	31.362	ENSXCOG00000012882	-	64	32.961
ENSXCOG00000014584	SRL	94	79.433	ENSXCOG00000010424	srl	97	79.433

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000014584	SRL	100	74.945	ENSG00000185739	SRL	99	75.814	Homo_sapiens
ENSXCOG00000014584	SRL	99	90.045	ENSAPOG00000012432	SRL	99	90.045	Acanthochromis_polyacanthus
ENSXCOG00000014584	SRL	99	76.889	ENSAPOG00000018093	srl	99	77.324	Acanthochromis_polyacanthus
ENSXCOG00000014584	SRL	99	74.667	ENSAMEG00000010862	SRL	50	76.018	Ailuropoda_melanoleuca
ENSXCOG00000014584	SRL	99	77.778	ENSACIG00000015799	srl	99	77.778	Amphilophus_citrinellus
ENSXCOG00000014584	SRL	99	90.045	ENSACIG00000015419	SRL	99	90.045	Amphilophus_citrinellus
ENSXCOG00000014584	SRL	99	87.611	ENSAOCG00000017049	SRL	98	87.805	Amphiprion_ocellaris
ENSXCOG00000014584	SRL	96	77.650	ENSAOCG00000007574	srl	100	77.650	Amphiprion_ocellaris
ENSXCOG00000014584	SRL	99	77.111	ENSAPEG00000006911	srl	96	77.111	Amphiprion_percula
ENSXCOG00000014584	SRL	99	83.784	ENSAPEG00000006533	SRL	98	83.814	Amphiprion_percula
ENSXCOG00000014584	SRL	99	85.065	ENSATEG00000009643	SRL	53	85.683	Anabas_testudineus
ENSXCOG00000014584	SRL	98	78.153	ENSATEG00000024315	srl	96	77.556	Anabas_testudineus
ENSXCOG00000014584	SRL	98	74.614	ENSACAG00000016380	SRL	85	73.810	Anolis_carolinensis
ENSXCOG00000014584	SRL	99	85.129	ENSACLG00000024674	SRL	58	85.529	Astatotilapia_calliptera
ENSXCOG00000014584	SRL	99	78.125	ENSACLG00000027685	srl	98	78.125	Astatotilapia_calliptera
ENSXCOG00000014584	SRL	94	79.762	ENSAMXG00000038693	SRL	100	76.380	Astyanax_mexicanus
ENSXCOG00000014584	SRL	99	77.283	ENSAMXG00000018789	srl	88	77.283	Astyanax_mexicanus
ENSXCOG00000014584	SRL	99	74.222	ENSBTAG00000001078	SRL	56	75.737	Bos_taurus
ENSXCOG00000014584	SRL	98	76.018	ENSCJAG00000019750	SRL	95	74.945	Callithrix_jacchus
ENSXCOG00000014584	SRL	98	75.566	ENSCAFG00000019233	SRL	82	75.566	Canis_familiaris
ENSXCOG00000014584	SRL	98	75.566	ENSCAFG00020025024	SRL	54	76.018	Canis_lupus_dingo
ENSXCOG00000014584	SRL	99	74.222	ENSCHIG00000017927	SRL	55	75.737	Capra_hircus
ENSXCOG00000014584	SRL	100	74.945	ENSTSYG00000007919	SRL	99	76.526	Carlito_syrichta
ENSXCOG00000014584	SRL	100	75.166	ENSCPOG00000012643	SRL	96	75.166	Cavia_porcellus
ENSXCOG00000014584	SRL	98	71.719	ENSCCAG00000032646	SRL	100	77.309	Cebus_capucinus
ENSXCOG00000014584	SRL	100	74.945	ENSCATG00000032227	-	95	74.945	Cercocebus_atys
ENSXCOG00000014584	SRL	100	75.166	ENSCLAG00000016242	SRL	96	75.166	Chinchilla_lanigera
ENSXCOG00000014584	SRL	85	78.442	ENSCHOG00000001618	SRL	52	78.961	Choloepus_hoffmanni
ENSXCOG00000014584	SRL	99	77.835	ENSCPBG00000026371	SRL	95	73.160	Chrysemys_picta_bellii
ENSXCOG00000014584	SRL	95	55.319	ENSCING00000005231	-	94	55.319	Ciona_intestinalis
ENSXCOG00000014584	SRL	100	74.945	ENSCANG00000035872	SRL	99	75.814	Colobus_angolensis_palliatus
ENSXCOG00000014584	SRL	100	74.723	ENSCGRG00001016630	Srl	96	75.831	Cricetulus_griseus_chok1gshd
ENSXCOG00000014584	SRL	100	74.723	ENSCGRG00000005458	Srl	96	75.831	Cricetulus_griseus_crigri
ENSXCOG00000014584	SRL	99	83.333	ENSCSEG00000011866	SRL	90	83.556	Cynoglossus_semilaevis
ENSXCOG00000014584	SRL	100	76.940	ENSCSEG00000016151	srl	96	77.111	Cynoglossus_semilaevis
ENSXCOG00000014584	SRL	99	91.739	ENSCVAG00000022465	SRL	61	91.540	Cyprinodon_variegatus
ENSXCOG00000014584	SRL	99	78.125	ENSCVAG00000003513	srl	97	78.125	Cyprinodon_variegatus
ENSXCOG00000014584	SRL	84	80.729	ENSDARG00000112959	CABZ01072309.1	100	80.729	Danio_rerio
ENSXCOG00000014584	SRL	100	78.097	ENSDARG00000104587	srl	96	78.097	Danio_rerio
ENSXCOG00000014584	SRL	98	75.339	ENSDNOG00000011643	SRL	53	75.792	Dasypus_novemcinctus
ENSXCOG00000014584	SRL	100	74.945	ENSDORG00000014807	Srl	96	75.388	Dipodomys_ordii
ENSXCOG00000014584	SRL	80	64.607	ENSEBUG00000015937	srl	90	64.607	Eptatretus_burgeri
ENSXCOG00000014584	SRL	99	74.667	ENSEASG00005000942	SRL	53	76.190	Equus_asinus_asinus
ENSXCOG00000014584	SRL	99	74.667	ENSECAG00000024219	SRL	95	74.667	Equus_caballus
ENSXCOG00000014584	SRL	99	74.249	ENSELUG00000015616	srl	96	74.249	Esox_lucius
ENSXCOG00000014584	SRL	98	74.887	ENSFCAG00000022075	SRL	95	74.945	Felis_catus
ENSXCOG00000014584	SRL	98	75.909	ENSFALG00000004328	SRL	63	75.909	Ficedula_albicollis
ENSXCOG00000014584	SRL	100	75.388	ENSFDAG00000006199	SRL	96	75.388	Fukomys_damarensis
ENSXCOG00000014584	SRL	99	92.568	ENSFHEG00000011854	SRL	99	92.584	Fundulus_heteroclitus
ENSXCOG00000014584	SRL	100	77.605	ENSFHEG00000011239	srl	97	77.902	Fundulus_heteroclitus
ENSXCOG00000014584	SRL	98	76.044	ENSGMOG00000014954	srl	100	76.044	Gadus_morhua
ENSXCOG00000014584	SRL	98	76.136	ENSGALG00000038884	SRL	93	76.136	Gallus_gallus
ENSXCOG00000014584	SRL	100	78.049	ENSGAFG00000000010	srl	98	78.222	Gambusia_affinis
ENSXCOG00000014584	SRL	99	99.323	ENSGAFG00000016984	SRL	100	99.323	Gambusia_affinis
ENSXCOG00000014584	SRL	98	76.264	ENSGACG00000011332	srl	100	76.264	Gasterosteus_aculeatus
ENSXCOG00000014584	SRL	100	74.945	ENSGGOG00000011312	-	95	74.945	Gorilla_gorilla
ENSXCOG00000014584	SRL	99	78.125	ENSHBUG00000007581	srl	98	78.125	Haplochromis_burtoni
ENSXCOG00000014584	SRL	99	85.560	ENSHBUG00000015710	SRL	58	85.961	Haplochromis_burtoni
ENSXCOG00000014584	SRL	100	75.166	ENSHGLG00000015271	SRL	96	75.166	Heterocephalus_glaber_female
ENSXCOG00000014584	SRL	100	75.166	ENSHGLG00100019378	SRL	96	75.166	Heterocephalus_glaber_male
ENSXCOG00000014584	SRL	99	77.333	ENSHCOG00000008687	srl	99	77.283	Hippocampus_comes
ENSXCOG00000014584	SRL	99	84.211	ENSHCOG00000001012	SRL	50	84.211	Hippocampus_comes
ENSXCOG00000014584	SRL	98	70.087	ENSIPUG00000011609	SRL	100	70.087	Ictalurus_punctatus
ENSXCOG00000014584	SRL	99	76.000	ENSIPUG00000012513	srl	96	76.000	Ictalurus_punctatus
ENSXCOG00000014584	SRL	100	75.388	ENSSTOG00000021151	-	96	75.388	Ictidomys_tridecemlineatus
ENSXCOG00000014584	SRL	100	74.723	ENSJJAG00000016400	Srl	96	75.831	Jaculus_jaculus
ENSXCOG00000014584	SRL	98	78.211	ENSKMAG00000014115	srl	99	75.778	Kryptolebias_marmoratus
ENSXCOG00000014584	SRL	98	91.494	ENSKMAG00000019537	SRL	100	91.494	Kryptolebias_marmoratus
ENSXCOG00000014584	SRL	99	85.398	ENSLBEG00000013811	SRL	97	85.588	Labrus_bergylta
ENSXCOG00000014584	SRL	99	77.333	ENSLBEG00000026643	srl	96	77.333	Labrus_bergylta
ENSXCOG00000014584	SRL	98	74.208	ENSLACG00000002825	SRL	98	74.208	Latimeria_chalumnae
ENSXCOG00000014584	SRL	98	77.828	ENSLOCG00000002644	srl	94	77.828	Lepisosteus_oculatus
ENSXCOG00000014584	SRL	98	75.737	ENSLAFG00000006329	SRL	50	76.018	Loxodonta_africana
ENSXCOG00000014584	SRL	95	75.814	ENSMFAG00000037383	SRL	99	75.814	Macaca_fascicularis
ENSXCOG00000014584	SRL	100	74.945	ENSMNEG00000019236	-	95	74.945	Macaca_nemestrina
ENSXCOG00000014584	SRL	100	68.958	ENSMLEG00000032156	SRL	95	68.958	Mandrillus_leucophaeus
ENSXCOG00000014584	SRL	98	77.703	ENSMAMG00000023322	srl	96	77.111	Mastacembelus_armatus
ENSXCOG00000014584	SRL	99	85.000	ENSMAMG00000013756	SRL	54	85.000	Mastacembelus_armatus
ENSXCOG00000014584	SRL	99	85.345	ENSMZEG00005004010	SRL	58	85.745	Maylandia_zebra
ENSXCOG00000014584	SRL	99	78.125	ENSMZEG00005004548	srl	98	78.125	Maylandia_zebra
ENSXCOG00000014584	SRL	98	76.136	ENSMGAG00000009342	SRL	92	80.822	Meleagris_gallopavo
ENSXCOG00000014584	SRL	100	75.388	ENSMICG00000032307	SRL	95	75.388	Microcebus_murinus
ENSXCOG00000014584	SRL	100	74.279	ENSMOCG00000008208	Srl	96	75.388	Microtus_ochrogaster
ENSXCOG00000014584	SRL	98	84.314	ENSMMOG00000021572	SRL	99	84.314	Mola_mola
ENSXCOG00000014584	SRL	99	76.889	ENSMMOG00000013970	srl	100	76.889	Mola_mola
ENSXCOG00000014584	SRL	98	77.551	ENSMODG00000016380	-	50	77.551	Monodelphis_domestica
ENSXCOG00000014584	SRL	93	87.893	ENSMALG00000000670	SRL	98	87.893	Monopterus_albus
ENSXCOG00000014584	SRL	100	76.497	ENSMALG00000005039	srl	99	76.615	Monopterus_albus
ENSXCOG00000014584	SRL	100	75.610	MGP_CAROLIEiJ_G0020400	Srl	96	75.610	Mus_caroli
ENSXCOG00000014584	SRL	100	75.610	ENSMUSG00000022519	Srl	96	75.610	Mus_musculus
ENSXCOG00000014584	SRL	100	75.610	MGP_SPRETEiJ_G0021294	Srl	96	75.610	Mus_spretus
ENSXCOG00000014584	SRL	100	74.501	ENSMPUG00000015025	SRL	54	76.018	Mustela_putorius_furo
ENSXCOG00000014584	SRL	98	76.018	ENSMLUG00000030733	SRL	56	76.471	Myotis_lucifugus
ENSXCOG00000014584	SRL	100	74.945	ENSNGAG00000019741	Srl	96	76.053	Nannospalax_galili
ENSXCOG00000014584	SRL	99	78.000	ENSNBRG00000023775	srl	96	78.000	Neolamprologus_brichardi
ENSXCOG00000014584	SRL	99	84.698	ENSNBRG00000002422	SRL	58	85.097	Neolamprologus_brichardi
ENSXCOG00000014584	SRL	100	70.288	ENSNLEG00000029051	SRL	95	70.288	Nomascus_leucogenys
ENSXCOG00000014584	SRL	100	69.845	ENSOPRG00000000477	-	53	70.288	Ochotona_princeps
ENSXCOG00000014584	SRL	100	75.831	ENSODEG00000013256	SRL	96	75.831	Octodon_degus
ENSXCOG00000014584	SRL	99	77.778	ENSONIG00000005192	srl	96	77.778	Oreochromis_niloticus
ENSXCOG00000014584	SRL	100	77.384	ENSORLG00000008291	srl	93	79.188	Oryzias_latipes
ENSXCOG00000014584	SRL	99	89.189	ENSORLG00000015064	SRL	98	89.189	Oryzias_latipes
ENSXCOG00000014584	SRL	100	77.605	ENSORLG00020019784	srl	81	79.442	Oryzias_latipes_hni
ENSXCOG00000014584	SRL	99	89.414	ENSORLG00020018173	SRL	98	89.414	Oryzias_latipes_hni
ENSXCOG00000014584	SRL	99	89.640	ENSORLG00015019063	SRL	98	89.640	Oryzias_latipes_hsok
ENSXCOG00000014584	SRL	100	77.384	ENSORLG00015009342	srl	93	77.384	Oryzias_latipes_hsok
ENSXCOG00000014584	SRL	100	77.827	ENSOMEG00000010006	srl	98	78.636	Oryzias_melastigma
ENSXCOG00000014584	SRL	99	86.551	ENSOMEG00000005682	SRL	53	86.768	Oryzias_melastigma
ENSXCOG00000014584	SRL	100	74.501	ENSOGAG00000029266	SRL	54	75.792	Otolemur_garnettii
ENSXCOG00000014584	SRL	99	74.222	ENSOARG00000003074	SRL	56	74.667	Ovis_aries
ENSXCOG00000014584	SRL	100	74.945	ENSPPAG00000024919	-	99	75.814	Pan_paniscus
ENSXCOG00000014584	SRL	98	74.887	ENSPPRG00000010274	SRL	99	76.279	Panthera_pardus
ENSXCOG00000014584	SRL	98	74.887	ENSPTIG00000015162	SRL	99	76.279	Panthera_tigris_altaica
ENSXCOG00000014584	SRL	100	74.945	ENSPTRG00000007712	SRL	99	75.814	Pan_troglodytes
ENSXCOG00000014584	SRL	100	74.945	ENSPANG00000013804	SRL	97	74.945	Papio_anubis
ENSXCOG00000014584	SRL	99	74.889	ENSPKIG00000024974	SRL	90	74.889	Paramormyrops_kingsleyae
ENSXCOG00000014584	SRL	99	78.444	ENSPKIG00000006405	srl	95	78.444	Paramormyrops_kingsleyae
ENSXCOG00000014584	SRL	98	86.239	ENSPMGG00000023505	-	99	86.239	Periophthalmus_magnuspinnatus
ENSXCOG00000014584	SRL	98	78.507	ENSPMGG00000021081	srl	95	78.507	Periophthalmus_magnuspinnatus
ENSXCOG00000014584	SRL	100	74.501	ENSPEMG00000015842	Srl	96	75.610	Peromyscus_maniculatus_bairdii
ENSXCOG00000014584	SRL	93	64.450	ENSPMAG00000004786	srl	99	64.450	Petromyzon_marinus
ENSXCOG00000014584	SRL	98	76.871	ENSPCIG00000012128	SRL	96	76.871	Phascolarctos_cinereus
ENSXCOG00000014584	SRL	100	76.458	ENSPFOG00000011408	srl	95	76.458	Poecilia_formosa
ENSXCOG00000014584	SRL	99	97.758	ENSPLAG00000002932	SRL	100	97.758	Poecilia_latipinna
ENSXCOG00000014584	SRL	99	78.444	ENSPLAG00000008017	srl	98	78.444	Poecilia_latipinna
ENSXCOG00000014584	SRL	100	78.271	ENSPMEG00000006745	srl	98	78.444	Poecilia_mexicana
ENSXCOG00000014584	SRL	100	94.397	ENSPMEG00000005890	SRL	61	94.397	Poecilia_mexicana
ENSXCOG00000014584	SRL	100	78.271	ENSPREG00000007751	srl	100	78.271	Poecilia_reticulata
ENSXCOG00000014584	SRL	99	98.206	ENSPREG00000000315	SRL	100	98.206	Poecilia_reticulata
ENSXCOG00000014584	SRL	95	75.349	ENSPPYG00000007053	SRL	100	75.349	Pongo_abelii
ENSXCOG00000014584	SRL	99	74.123	ENSPCAG00000003378	-	50	76.417	Procavia_capensis
ENSXCOG00000014584	SRL	100	74.945	ENSPCOG00000023135	SRL	99	76.526	Propithecus_coquereli
ENSXCOG00000014584	SRL	100	75.166	ENSPVAG00000006586	SRL	54	76.697	Pteropus_vampyrus
ENSXCOG00000014584	SRL	99	85.345	ENSPNYG00000003423	SRL	58	85.745	Pundamilia_nyererei
ENSXCOG00000014584	SRL	99	78.125	ENSPNYG00000001200	srl	98	78.125	Pundamilia_nyererei
ENSXCOG00000014584	SRL	99	79.596	ENSPNAG00000007361	-	92	79.596	Pygocentrus_nattereri
ENSXCOG00000014584	SRL	99	76.444	ENSPNAG00000023106	srl	96	76.444	Pygocentrus_nattereri
ENSXCOG00000014584	SRL	99	75.111	ENSRBIG00000042358	SRL	50	75.556	Rhinopithecus_bieti
ENSXCOG00000014584	SRL	98	76.190	ENSSBOG00000029273	SRL	95	74.945	Saimiri_boliviensis_boliviensis
ENSXCOG00000014584	SRL	98	75.450	ENSSFOG00015021327	SRL	50	75.168	Scleropages_formosus
ENSXCOG00000014584	SRL	98	77.928	ENSSFOG00015009773	srl	96	77.333	Scleropages_formosus
ENSXCOG00000014584	SRL	99	77.578	ENSSMAG00000016274	srl	98	77.455	Scophthalmus_maximus
ENSXCOG00000014584	SRL	99	84.052	ENSSMAG00000002232	SRL	51	84.233	Scophthalmus_maximus
ENSXCOG00000014584	SRL	99	78.475	ENSSDUG00000010808	srl	98	78.475	Seriola_dumerili
ENSXCOG00000014584	SRL	99	87.556	ENSSDUG00000009161	SRL	100	87.556	Seriola_dumerili
ENSXCOG00000014584	SRL	100	78.049	ENSSLDG00000022024	srl	97	78.348	Seriola_lalandi_dorsalis
ENSXCOG00000014584	SRL	98	86.404	ENSSLDG00000014601	SRL	99	87.033	Seriola_lalandi_dorsalis
ENSXCOG00000014584	SRL	98	74.550	ENSSPUG00000016859	SRL	98	74.550	Sphenodon_punctatus
ENSXCOG00000014584	SRL	99	89.140	ENSSPAG00000014254	SRL	99	89.140	Stegastes_partitus
ENSXCOG00000014584	SRL	99	77.111	ENSSPAG00000019105	srl	95	77.111	Stegastes_partitus
ENSXCOG00000014584	SRL	98	75.737	ENSSSCG00000007949	SRL	98	75.737	Sus_scrofa
ENSXCOG00000014584	SRL	98	75.909	ENSTGUG00000003951	-	97	75.909	Taeniopygia_guttata
ENSXCOG00000014584	SRL	80	80.618	ENSTGUG00000016121	-	98	80.618	Taeniopygia_guttata
ENSXCOG00000014584	SRL	93	86.715	ENSTRUG00000013310	SRL	55	86.715	Takifugu_rubripes
ENSXCOG00000014584	SRL	100	77.162	ENSTRUG00000006005	srl	96	77.162	Takifugu_rubripes
ENSXCOG00000014584	SRL	100	76.940	ENSTNIG00000009739	srl	96	76.940	Tetraodon_nigroviridis
ENSXCOG00000014584	SRL	98	75.566	ENSUAMG00000005701	SRL	55	76.018	Ursus_americanus
ENSXCOG00000014584	SRL	98	75.566	ENSUMAG00000002574	SRL	55	76.018	Ursus_maritimus
ENSXCOG00000014584	SRL	98	75.792	ENSXETG00000017313	srl	98	75.792	Xenopus_tropicalis
ENSXCOG00000014584	SRL	99	95.680	ENSXMAG00000027598	SRL	63	95.680	Xiphophorus_maculatus
ENSXCOG00000014584	SRL	100	78.049	ENSXMAG00000004625	srl	91	78.049	Xiphophorus_maculatus