EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000014654 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 1535 bases
Position: chrKQ557216.1:764298-765832
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000019505	RNA_pol_Rpb2_7	PF04560.20	2.1e-26	1	1
ENSXCOP00000019505	RNA_pol_Rpb2_6	PF00562.28	3.3e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000019745	-	873	-	ENSXCOP00000019505	290 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000014654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000014654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000014654	-	63	48.259	ENSCING00000023381	-	97	48.259	Ciona_intestinalis
ENSXCOG00000014654	-	100	98.966	ENSGAFG00000016488	-	100	98.966	Gambusia_affinis
ENSXCOG00000014654	-	99	40.606	ENSHBUG00000008882	polr3b	95	40.606	Haplochromis_burtoni
ENSXCOG00000014654	-	99	76.347	ENSMICG00000015166	POLR2B	66	76.347	Microcebus_murinus
ENSXCOG00000014654	-	99	45.593	ENSOMEG00000010619	polr3b	95	45.593	Oryzias_melastigma
ENSXCOG00000014654	-	99	45.455	ENSPMGG00000013671	polr3b	95	45.455	Periophthalmus_magnuspinnatus
ENSXCOG00000014654	-	83	31.250	ENSPMGG00000017095	-	74	31.250	Periophthalmus_magnuspinnatus
ENSXCOG00000014654	-	99	46.177	ENSPMAG00000008197	-	67	46.177	Petromyzon_marinus
ENSXCOG00000014654	-	99	66.766	ENSPCOG00000009281	-	73	66.766	Propithecus_coquereli
ENSXCOG00000014654	-	99	79.341	ENSRBIG00000042838	POLR2B	67	79.341	Rhinopithecus_bieti
ENSXCOG00000014654	-	99	79.042	ENSSPUG00000018295	POLR2B	67	79.042	Sphenodon_punctatus
ENSXCOG00000014654	-	99	46.012	ENSSPUG00000004905	-	94	46.012	Sphenodon_punctatus
ENSXCOG00000014654	-	99	46.483	ENSSPAG00000008909	polr3b	95	46.483	Stegastes_partitus
ENSXCOG00000014654	-	100	81.791	ENSSPAG00000019229	-	67	81.791	Stegastes_partitus
ENSXCOG00000014654	-	99	45.758	ENSUAMG00000024267	POLR3B	51	45.758	Ursus_americanus
ENSXCOG00000014654	-	99	79.042	ENSUAMG00000003345	-	75	79.042	Ursus_americanus