EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000014657 (Gene tree)
Gene ID: -
Gene Symbol: POLR2B
Alias: RPB2
Full Name: RNA polymerase II subunit B
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2471 bases
Position: chrKQ557216.1:768491-770961
Accession: 9188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000019507	RNA_pol_Rpb2_1	PF04563.15	1.6e-58	1	1
ENSXCOP00000019507	RNA_pol_Rpb2_2	PF04561.14	4.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000019747	POLR2B-201	1101	-	ENSXCOP00000019507	366 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000014657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000014657's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000014657	POLR2B	100	96.995	ENSG00000047315	POLR2B	100	96.875	Homo_sapiens
ENSXCOG00000014657	POLR2B	100	98.907	ENSDARG00000098783	polr2b	100	98.907	Danio_rerio
ENSXCOG00000014657	POLR2B	61	96.429	ENSDARG00000104434	CABZ01048453.1	92	96.429	Danio_rerio
ENSXCOG00000014657	POLR2B	100	100.000	ENSGAFG00000016504	POLR2B	100	100.000	Gambusia_affinis
ENSXCOG00000014657	POLR2B	100	99.454	ENSLBEG00000016719	POLR2B	100	99.454	Labrus_bergylta
ENSXCOG00000014657	POLR2B	100	99.454	ENSLBEG00000010055	-	100	99.454	Labrus_bergylta
ENSXCOG00000014657	POLR2B	52	38.220	ENSMGAG00000012873	-	74	38.220	Meleagris_gallopavo
ENSXCOG00000014657	POLR2B	90	33.333	ENSMUSG00000034453	Polr3b	54	32.000	Mus_musculus
ENSXCOG00000014657	POLR2B	87	81.761	ENSSPUG00000018434	-	90	81.761	Sphenodon_punctatus
ENSXCOG00000014657	POLR2B	74	32.616	ENSSPUG00000004872	-	82	32.616	Sphenodon_punctatus
ENSXCOG00000014657	POLR2B	96	31.564	ENSSPAG00000008931	polr3b	80	31.564	Stegastes_partitus
ENSXCOG00000014657	POLR2B	53	98.964	ENSTRUG00000019743	polr2b	80	98.964	Takifugu_rubripes
ENSXCOG00000014657	POLR2B	70	33.077	ENSTNIG00000012124	-	88	33.077	Tetraodon_nigroviridis