EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000014843 (Gene tree)
Gene ID: -
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2539 bases
Position: chrKQ557216.1:2773640-2776178
Accession: 14264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000019771	Gar1	PF04410.14	6.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000020017	GAR1-201	708	-	ENSXCOP00000019771	235 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000014843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000014843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000014843	GAR1	67	81.356	ENSCHIG00000011049	-	54	80.374	Capra_hircus
ENSXCOG00000014843	GAR1	52	91.803	ENSCGRG00001003919	Gar1	58	87.597	Cricetulus_griseus_chok1gshd
ENSXCOG00000014843	GAR1	90	94.787	ENSCVAG00000002103	gar1	52	98.148	Cyprinodon_variegatus
ENSXCOG00000014843	GAR1	90	94.860	ENSFHEG00000008068	gar1	99	94.860	Fundulus_heteroclitus
ENSXCOG00000014843	GAR1	82	94.792	ENSGAFG00000016833	gar1	82	94.792	Gambusia_affinis
ENSXCOG00000014843	GAR1	51	86.667	ENSLACG00000003306	GAR1	64	87.736	Latimeria_chalumnae
ENSXCOG00000014843	GAR1	52	91.803	ENSMAUG00000016788	Gar1	70	96.364	Mesocricetus_auratus
ENSXCOG00000014843	GAR1	66	90.984	MGP_CAROLIEiJ_G0025627	Gar1	70	96.364	Mus_caroli
ENSXCOG00000014843	GAR1	66	89.600	ENSMUSG00000028010	Gar1	70	96.364	Mus_musculus
ENSXCOG00000014843	GAR1	53	89.600	MGP_PahariEiJ_G0027076	Gar1	70	96.364	Mus_pahari
ENSXCOG00000014843	GAR1	66	89.600	MGP_SPRETEiJ_G0026580	Gar1	70	96.364	Mus_spretus
ENSXCOG00000014843	GAR1	66	84.615	ENSNLEG00000016578	GAR1	50	94.393	Nomascus_leucogenys
ENSXCOG00000014843	GAR1	90	97.156	ENSPMEG00000009320	gar1	99	97.156	Poecilia_mexicana
ENSXCOG00000014843	GAR1	100	97.458	ENSPREG00000010377	gar1	100	97.458	Poecilia_reticulata
ENSXCOG00000014843	GAR1	61	80.556	ENSSHAG00000002161	GAR1	79	87.970	Sarcophilus_harrisii
ENSXCOG00000014843	GAR1	72	78.235	ENSVVUG00000017612	GAR1	55	93.458	Vulpes_vulpes
ENSXCOG00000014843	GAR1	90	99.526	ENSXMAG00000002316	GAR1	89	99.526	Xiphophorus_maculatus