EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000015019 (Gene tree)
Gene ID: -
Gene Symbol: sharpin
Alias: sipl1
Full Name: SHANK-associated RH domain interacting protein
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 4768 bases
Position: chrKQ557221.1:16807369-16812136
Accession: ZDB-GENE-101223-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000019995	zf-RanBP	PF00641.18	1.2e-06	1	1
ENSXCOP00000019994	zf-RanBP	PF00641.18	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000020241	-	1029	-	ENSXCOP00000019994	342 (aa)	-	-
ENSXCOT00000020242	-	963	-	ENSXCOP00000019995	320 (aa)	-	-
ENSXCOT00000020243	-	852	-	ENSXCOP00000019996	284 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000015019's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015019's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000015019	sharpin	96	42.647	ENSXCOG00000006701	shrprbck1r	58	42.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000015019	sharpin	98	58.432	ENSAPOG00000023352	sharpin	96	58.432	Acanthochromis_polyacanthus
ENSXCOG00000015019	sharpin	96	58.333	ENSAPOG00000022737	shrprbck1r	51	58.333	Acanthochromis_polyacanthus
ENSXCOG00000015019	sharpin	96	45.316	ENSACIG00000002184	shrprbck1r	87	45.316	Amphilophus_citrinellus
ENSXCOG00000015019	sharpin	96	56.250	ENSAOCG00000002890	shrprbck1r	52	56.250	Amphiprion_ocellaris
ENSXCOG00000015019	sharpin	98	58.670	ENSAOCG00000017464	sharpin	96	58.670	Amphiprion_ocellaris
ENSXCOG00000015019	sharpin	98	58.670	ENSAPEG00000004049	sharpin	96	58.670	Amphiprion_percula
ENSXCOG00000015019	sharpin	96	56.250	ENSAPEG00000023274	shrprbck1r	50	56.250	Amphiprion_percula
ENSXCOG00000015019	sharpin	96	43.099	ENSATEG00000014561	shrprbck1r	59	42.857	Anabas_testudineus
ENSXCOG00000015019	sharpin	99	57.279	ENSATEG00000007832	sharpin	88	57.279	Anabas_testudineus
ENSXCOG00000015019	sharpin	60	62.255	ENSACLG00000020160	-	62	64.324	Astatotilapia_calliptera
ENSXCOG00000015019	sharpin	96	56.250	ENSACLG00000022609	shrprbck1r	52	56.250	Astatotilapia_calliptera
ENSXCOG00000015019	sharpin	86	46.011	ENSAMXG00000006229	sharpin	96	46.011	Astyanax_mexicanus
ENSXCOG00000015019	sharpin	96	56.250	ENSAMXG00000021016	shrprbck1r	55	56.250	Astyanax_mexicanus
ENSXCOG00000015019	sharpin	96	54.167	ENSCSEG00000011306	shrprbck1r	59	41.727	Cynoglossus_semilaevis
ENSXCOG00000015019	sharpin	98	62.945	ENSCVAG00000006586	sharpin	96	62.945	Cyprinodon_variegatus
ENSXCOG00000015019	sharpin	96	41.745	ENSCVAG00000007250	shrprbck1r	59	41.745	Cyprinodon_variegatus
ENSXCOG00000015019	sharpin	88	41.985	ENSDARG00000076995	sharpin	95	41.985	Danio_rerio
ENSXCOG00000015019	sharpin	96	50.313	ENSDARG00000059871	shrprbck1r	73	65.517	Danio_rerio
ENSXCOG00000015019	sharpin	96	45.521	ENSELUG00000016022	shrprbck1r	59	45.036	Esox_lucius
ENSXCOG00000015019	sharpin	98	63.723	ENSFHEG00000013564	sharpin	96	63.723	Fundulus_heteroclitus
ENSXCOG00000015019	sharpin	97	55.585	ENSGMOG00000010123	sharpin	94	55.585	Gadus_morhua
ENSXCOG00000015019	sharpin	99	83.573	ENSGAFG00000021405	sharpin	98	83.573	Gambusia_affinis
ENSXCOG00000015019	sharpin	96	42.824	ENSGAFG00000009309	shrprbck1r	59	42.824	Gambusia_affinis
ENSXCOG00000015019	sharpin	98	52.206	ENSHCOG00000018847	sharpin	81	53.995	Hippocampus_comes
ENSXCOG00000015019	sharpin	96	43.562	ENSIPUG00000011951	sharpin	99	45.013	Ictalurus_punctatus
ENSXCOG00000015019	sharpin	88	44.051	ENSIPUG00000014247	shrprbck1r	54	44.051	Ictalurus_punctatus
ENSXCOG00000015019	sharpin	99	94.595	ENSKMAG00000015204	sharpin	67	94.595	Kryptolebias_marmoratus
ENSXCOG00000015019	sharpin	96	56.250	ENSKMAG00000015215	shrprbck1r	52	56.250	Kryptolebias_marmoratus
ENSXCOG00000015019	sharpin	97	56.731	ENSLBEG00000016624	sharpin	95	56.490	Labrus_bergylta
ENSXCOG00000015019	sharpin	91	76.923	ENSLBEG00000016876	shrprbck1r	51	55.319	Labrus_bergylta
ENSXCOG00000015019	sharpin	96	45.626	ENSLOCG00000008910	shrprbck1r	59	44.917	Lepisosteus_oculatus
ENSXCOG00000015019	sharpin	88	74.074	ENSMAMG00000022930	shrprbck1r	60	43.437	Mastacembelus_armatus
ENSXCOG00000015019	sharpin	97	58.896	ENSMAMG00000014645	sharpin	94	58.589	Mastacembelus_armatus
ENSXCOG00000015019	sharpin	96	56.250	ENSMZEG00005021257	shrprbck1r	52	56.250	Maylandia_zebra
ENSXCOG00000015019	sharpin	99	65.868	ENSMMOG00000016788	sharpin	92	65.868	Mola_mola
ENSXCOG00000015019	sharpin	96	50.000	ENSMMOG00000003764	shrprbck1r	50	50.000	Mola_mola
ENSXCOG00000015019	sharpin	87	44.730	ENSMALG00000008861	shrprbck1r	55	44.730	Monopterus_albus
ENSXCOG00000015019	sharpin	97	58.808	ENSMALG00000020528	sharpin	95	59.350	Monopterus_albus
ENSXCOG00000015019	sharpin	96	56.250	ENSNBRG00000002270	shrprbck1r	52	56.250	Neolamprologus_brichardi
ENSXCOG00000015019	sharpin	57	79.188	ENSNBRG00000012382	sharpin	71	79.188	Neolamprologus_brichardi
ENSXCOG00000015019	sharpin	96	56.250	ENSONIG00000014401	shrprbck1r	59	41.379	Oreochromis_niloticus
ENSXCOG00000015019	sharpin	78	79.167	ENSONIG00000009626	-	98	68.075	Oreochromis_niloticus
ENSXCOG00000015019	sharpin	96	66.667	ENSORLG00000007392	shrprbck1r	51	66.667	Oryzias_latipes
ENSXCOG00000015019	sharpin	99	80.952	ENSORLG00000017281	sharpin	79	80.952	Oryzias_latipes
ENSXCOG00000015019	sharpin	99	56.459	ENSORLG00020000801	sharpin	97	56.459	Oryzias_latipes_hni
ENSXCOG00000015019	sharpin	96	42.923	ENSORLG00015018865	shrprbck1r	59	42.923	Oryzias_latipes_hsok
ENSXCOG00000015019	sharpin	99	83.721	ENSORLG00015009860	sharpin	80	83.721	Oryzias_latipes_hsok
ENSXCOG00000015019	sharpin	99	67.449	ENSOMEG00000005729	sharpin	91	67.449	Oryzias_melastigma
ENSXCOG00000015019	sharpin	95	68.750	ENSOMEG00000012749	shrprbck1r	50	66.667	Oryzias_melastigma
ENSXCOG00000015019	sharpin	96	45.933	ENSPKIG00000018308	-	87	45.933	Paramormyrops_kingsleyae
ENSXCOG00000015019	sharpin	96	47.847	ENSPKIG00000006933	shrprbck1r	59	48.926	Paramormyrops_kingsleyae
ENSXCOG00000015019	sharpin	96	43.137	ENSPMGG00000013254	shrprbck1r	58	43.137	Periophthalmus_magnuspinnatus
ENSXCOG00000015019	sharpin	97	65.741	ENSPMGG00000019318	sharpin	96	66.667	Periophthalmus_magnuspinnatus
ENSXCOG00000015019	sharpin	98	69.095	ENSPFOG00000015253	sharpin	96	69.095	Poecilia_formosa
ENSXCOG00000015019	sharpin	96	42.891	ENSPFOG00000004214	shrprbck1r	88	42.654	Poecilia_formosa
ENSXCOG00000015019	sharpin	96	42.790	ENSPLAG00000020523	shrprbck1r	59	42.790	Poecilia_latipinna
ENSXCOG00000015019	sharpin	98	65.871	ENSPLAG00000000423	sharpin	96	65.871	Poecilia_latipinna
ENSXCOG00000015019	sharpin	96	42.243	ENSPMEG00000006877	shrprbck1r	59	42.243	Poecilia_mexicana
ENSXCOG00000015019	sharpin	99	75.723	ENSPMEG00000023030	sharpin	91	76.879	Poecilia_mexicana
ENSXCOG00000015019	sharpin	98	65.952	ENSPREG00000009702	sharpin	96	65.952	Poecilia_reticulata
ENSXCOG00000015019	sharpin	96	41.363	ENSPREG00000014689	shrprbck1r	59	41.363	Poecilia_reticulata
ENSXCOG00000015019	sharpin	96	56.250	ENSPNYG00000022601	shrprbck1r	52	56.250	Pundamilia_nyererei
ENSXCOG00000015019	sharpin	86	45.349	ENSPNAG00000002911	sharpin	99	45.349	Pygocentrus_nattereri
ENSXCOG00000015019	sharpin	96	67.742	ENSPNAG00000007847	shrprbck1r	51	67.742	Pygocentrus_nattereri
ENSXCOG00000015019	sharpin	82	63.452	ENSSFOG00015004028	sharpin	65	63.452	Scleropages_formosus
ENSXCOG00000015019	sharpin	96	41.299	ENSSMAG00000018085	shrprbck1r	50	75.000	Scophthalmus_maximus
ENSXCOG00000015019	sharpin	96	44.573	ENSSDUG00000002959	shrprbck1r	59	44.804	Seriola_dumerili
ENSXCOG00000015019	sharpin	97	61.219	ENSSDUG00000019039	sharpin	95	61.219	Seriola_dumerili
ENSXCOG00000015019	sharpin	93	61.765	ENSSLDG00000009026	shrprbck1r	50	76.923	Seriola_lalandi_dorsalis
ENSXCOG00000015019	sharpin	96	56.250	ENSSPAG00000016097	shrprbck1r	51	56.250	Stegastes_partitus
ENSXCOG00000015019	sharpin	57	73.936	ENSSPAG00000021807	sharpin	71	73.936	Stegastes_partitus
ENSXCOG00000015019	sharpin	97	57.067	ENSTRUG00000011046	sharpin	96	57.600	Takifugu_rubripes
ENSXCOG00000015019	sharpin	93	59.838	ENSTNIG00000008521	sharpin	99	59.838	Tetraodon_nigroviridis
ENSXCOG00000015019	sharpin	96	42.647	ENSXMAG00000018972	shrprbck1r	58	42.647	Xiphophorus_maculatus
ENSXCOG00000015019	sharpin	98	66.348	ENSXMAG00000022076	sharpin	96	66.348	Xiphophorus_maculatus