EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000015061 (Gene tree)
Gene ID: -
Gene Symbol: zmat4b
Alias: si:dkey-159k22.3|zmat4
Full Name: zinc finger%2C matrin-type 4b
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 27869 bases
Position: chrKQ557204.1:5046541-5074409
Accession: ZDB-GENE-091118-68
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000020089	zf-met	PF12874.7	3.3e-12	1	2
ENSXCOP00000020089	zf-met	PF12874.7	3.3e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000020336	-	375	-	ENSXCOP00000020089	124 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000015061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015061's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000015061	zmat4b	92	61.538	ENSG00000165061	ZMAT4	74	88.235	Homo_sapiens
ENSXCOG00000015061	zmat4b	92	60.769	ENSAMEG00000002758	ZMAT4	55	60.769	Ailuropoda_melanoleuca
ENSXCOG00000015061	zmat4b	85	71.901	ENSACIG00000009080	zmat4a	55	71.901	Amphilophus_citrinellus
ENSXCOG00000015061	zmat4b	87	71.545	ENSATEG00000012630	zmat4a	83	71.545	Anabas_testudineus
ENSXCOG00000015061	zmat4b	98	59.124	ENSAPLG00000006106	ZMAT4	57	59.124	Anas_platyrhynchos
ENSXCOG00000015061	zmat4b	94	60.150	ENSACAG00000005388	ZMAT4	61	60.150	Anolis_carolinensis
ENSXCOG00000015061	zmat4b	92	61.538	ENSANAG00000027926	ZMAT4	80	62.500	Aotus_nancymaae
ENSXCOG00000015061	zmat4b	85	71.074	ENSACLG00000005038	zmat4a	50	71.074	Astatotilapia_calliptera
ENSXCOG00000015061	zmat4b	84	69.748	ENSAMXG00000035337	zmat4a	52	69.748	Astyanax_mexicanus
ENSXCOG00000015061	zmat4b	85	64.463	ENSBTAG00000017420	ZMAT4	50	64.463	Bos_taurus
ENSXCOG00000015061	zmat4b	92	60.769	ENSCAFG00000005744	ZMAT4	54	60.769	Canis_familiaris
ENSXCOG00000015061	zmat4b	92	60.769	ENSCHIG00000022017	ZMAT4	55	60.769	Capra_hircus
ENSXCOG00000015061	zmat4b	85	65.289	ENSCAPG00000014401	ZMAT4	50	65.289	Cavia_aperea
ENSXCOG00000015061	zmat4b	85	65.289	ENSCPOG00000015224	ZMAT4	50	65.289	Cavia_porcellus
ENSXCOG00000015061	zmat4b	92	61.538	ENSCCAG00000027437	ZMAT4	80	62.500	Cebus_capucinus
ENSXCOG00000015061	zmat4b	92	61.538	ENSCATG00000044978	ZMAT4	56	88.235	Cercocebus_atys
ENSXCOG00000015061	zmat4b	85	65.289	ENSCLAG00000000923	ZMAT4	50	65.289	Chinchilla_lanigera
ENSXCOG00000015061	zmat4b	92	61.538	ENSCSAG00000015108	ZMAT4	55	61.538	Chlorocebus_sabaeus
ENSXCOG00000015061	zmat4b	92	61.538	ENSCHOG00000003755	ZMAT4	55	61.538	Choloepus_hoffmanni
ENSXCOG00000015061	zmat4b	88	64.000	ENSCPBG00000002781	ZMAT4	76	64.000	Chrysemys_picta_bellii
ENSXCOG00000015061	zmat4b	85	66.116	ENSCGRG00001016583	Zmat4	50	66.116	Cricetulus_griseus_chok1gshd
ENSXCOG00000015061	zmat4b	85	66.116	ENSCGRG00000002696	Zmat4	76	65.517	Cricetulus_griseus_crigri
ENSXCOG00000015061	zmat4b	87	65.041	ENSDARG00000061419	zmat4b	61	65.041	Danio_rerio
ENSXCOG00000015061	zmat4b	96	65.672	ENSDARG00000092987	zmat4a	79	70.732	Danio_rerio
ENSXCOG00000015061	zmat4b	85	65.289	ENSDNOG00000001045	ZMAT4	51	65.289	Dasypus_novemcinctus
ENSXCOG00000015061	zmat4b	93	61.069	ENSDORG00000009300	Zmat4	55	61.069	Dipodomys_ordii
ENSXCOG00000015061	zmat4b	85	65.289	ENSEASG00005010447	ZMAT4	50	65.289	Equus_asinus_asinus
ENSXCOG00000015061	zmat4b	85	65.289	ENSECAG00000021550	ZMAT4	50	65.289	Equus_caballus
ENSXCOG00000015061	zmat4b	85	62.609	ENSEEUG00000002565	ZMAT4	51	62.609	Erinaceus_europaeus
ENSXCOG00000015061	zmat4b	93	64.615	ENSELUG00000005097	zmat4a	56	64.615	Esox_lucius
ENSXCOG00000015061	zmat4b	92	61.538	ENSFCAG00000012775	ZMAT4	80	62.500	Felis_catus
ENSXCOG00000015061	zmat4b	83	67.227	ENSFALG00000006455	ZMAT4	50	67.227	Ficedula_albicollis
ENSXCOG00000015061	zmat4b	85	71.901	ENSFHEG00000022872	zmat4b	52	71.901	Fundulus_heteroclitus
ENSXCOG00000015061	zmat4b	92	64.341	ENSGMOG00000007950	zmat4a	56	64.341	Gadus_morhua
ENSXCOG00000015061	zmat4b	83	65.546	ENSGALG00000003470	ZMAT4	50	65.546	Gallus_gallus
ENSXCOG00000015061	zmat4b	100	64.748	ENSGAFG00000013149	zmat4a	52	72.414	Gambusia_affinis
ENSXCOG00000015061	zmat4b	87	70.732	ENSGACG00000005515	zmat4a	77	70.732	Gasterosteus_aculeatus
ENSXCOG00000015061	zmat4b	94	61.654	ENSGAGG00000004799	ZMAT4	86	64.000	Gopherus_agassizii
ENSXCOG00000015061	zmat4b	92	61.538	ENSGGOG00000006633	ZMAT4	56	88.235	Gorilla_gorilla
ENSXCOG00000015061	zmat4b	85	66.393	ENSHGLG00000003246	ZMAT4	51	66.393	Heterocephalus_glaber_female
ENSXCOG00000015061	zmat4b	89	68.800	ENSHCOG00000006516	zmat4b	96	68.800	Hippocampus_comes
ENSXCOG00000015061	zmat4b	92	61.538	ENSJJAG00000013484	Zmat4	54	61.538	Jaculus_jaculus
ENSXCOG00000015061	zmat4b	85	61.789	ENSLACG00000006206	-	51	61.789	Latimeria_chalumnae
ENSXCOG00000015061	zmat4b	92	66.667	ENSLOCG00000015435	zmat4b	55	66.667	Lepisosteus_oculatus
ENSXCOG00000015061	zmat4b	85	66.116	ENSLAFG00000014753	ZMAT4	51	66.116	Loxodonta_africana
ENSXCOG00000015061	zmat4b	92	61.538	ENSMFAG00000043475	ZMAT4	56	88.235	Macaca_fascicularis
ENSXCOG00000015061	zmat4b	92	61.538	ENSMNEG00000042102	ZMAT4	57	88.235	Macaca_nemestrina
ENSXCOG00000015061	zmat4b	92	61.538	ENSMLEG00000034448	ZMAT4	80	62.500	Mandrillus_leucophaeus
ENSXCOG00000015061	zmat4b	87	69.919	ENSMAMG00000019914	zmat4a	78	69.919	Mastacembelus_armatus
ENSXCOG00000015061	zmat4b	83	65.546	ENSMGAG00000002288	ZMAT4	50	65.546	Meleagris_gallopavo
ENSXCOG00000015061	zmat4b	92	61.538	ENSMOCG00000015996	Zmat4	54	61.538	Microtus_ochrogaster
ENSXCOG00000015061	zmat4b	94	67.939	ENSMMOG00000012619	zmat4a	90	67.939	Mola_mola
ENSXCOG00000015061	zmat4b	85	66.116	MGP_CAROLIEiJ_G0030909	Zmat4	100	63.725	Mus_caroli
ENSXCOG00000015061	zmat4b	85	66.116	ENSMUSG00000037492	Zmat4	100	63.725	Mus_musculus
ENSXCOG00000015061	zmat4b	85	66.116	MGP_PahariEiJ_G0021380	Zmat4	100	63.725	Mus_pahari
ENSXCOG00000015061	zmat4b	85	66.116	MGP_SPRETEiJ_G0032028	Zmat4	100	63.725	Mus_spretus
ENSXCOG00000015061	zmat4b	85	65.289	ENSNGAG00000015545	Zmat4	50	65.289	Nannospalax_galili
ENSXCOG00000015061	zmat4b	88	70.968	ENSNBRG00000011844	zmat4a	54	70.968	Neolamprologus_brichardi
ENSXCOG00000015061	zmat4b	92	61.538	ENSNLEG00000012564	ZMAT4	80	62.500	Nomascus_leucogenys
ENSXCOG00000015061	zmat4b	98	58.394	ENSMEUG00000000558	ZMAT4	58	58.394	Notamacropus_eugenii
ENSXCOG00000015061	zmat4b	85	65.289	ENSOPRG00000009257	ZMAT4	50	65.289	Ochotona_princeps
ENSXCOG00000015061	zmat4b	85	65.289	ENSODEG00000006439	ZMAT4	50	65.289	Octodon_degus
ENSXCOG00000015061	zmat4b	88	64.000	ENSOANG00000022431	ZMAT4	87	64.000	Ornithorhynchus_anatinus
ENSXCOG00000015061	zmat4b	85	65.289	ENSOCUG00000000977	ZMAT4	50	65.289	Oryctolagus_cuniculus
ENSXCOG00000015061	zmat4b	89	71.200	ENSORLG00000016169	zmat4b	82	71.200	Oryzias_latipes
ENSXCOG00000015061	zmat4b	87	72.358	ENSORLG00020019602	zmat4a	52	72.358	Oryzias_latipes_hni
ENSXCOG00000015061	zmat4b	87	72.358	ENSORLG00015009006	zmat4a	52	72.358	Oryzias_latipes_hsok
ENSXCOG00000015061	zmat4b	85	63.636	ENSOGAG00000012558	ZMAT4	51	63.636	Otolemur_garnettii
ENSXCOG00000015061	zmat4b	92	61.538	ENSPPAG00000042573	ZMAT4	56	88.235	Pan_paniscus
ENSXCOG00000015061	zmat4b	92	60.769	ENSPPRG00000007023	ZMAT4	80	61.719	Panthera_pardus
ENSXCOG00000015061	zmat4b	92	60.769	ENSPTIG00000019738	ZMAT4	80	61.719	Panthera_tigris_altaica
ENSXCOG00000015061	zmat4b	92	61.538	ENSPTRG00000020191	ZMAT4	56	88.235	Pan_troglodytes
ENSXCOG00000015061	zmat4b	92	61.538	ENSPANG00000014196	ZMAT4	56	88.235	Papio_anubis
ENSXCOG00000015061	zmat4b	100	60.432	ENSPKIG00000000048	zmat4a	52	60.432	Paramormyrops_kingsleyae
ENSXCOG00000015061	zmat4b	97	54.815	ENSPKIG00000021792	zmat4b	84	54.815	Paramormyrops_kingsleyae
ENSXCOG00000015061	zmat4b	94	62.406	ENSPSIG00000004847	ZMAT4	55	62.406	Pelodiscus_sinensis
ENSXCOG00000015061	zmat4b	88	69.355	ENSPMGG00000001436	zmat4b	61	69.355	Periophthalmus_magnuspinnatus
ENSXCOG00000015061	zmat4b	98	59.854	ENSPCIG00000028706	ZMAT4	70	64.228	Phascolarctos_cinereus
ENSXCOG00000015061	zmat4b	100	65.468	ENSPFOG00000006742	zmat4a	52	65.468	Poecilia_formosa
ENSXCOG00000015061	zmat4b	89	99.091	ENSPLAG00000019268	zmat4a	52	99.091	Poecilia_latipinna
ENSXCOG00000015061	zmat4b	100	65.468	ENSPMEG00000007870	zmat4a	58	65.468	Poecilia_mexicana
ENSXCOG00000015061	zmat4b	100	65.468	ENSPREG00000014914	zmat4a	52	65.468	Poecilia_reticulata
ENSXCOG00000015061	zmat4b	92	61.538	ENSPPYG00000018540	ZMAT4	54	61.538	Pongo_abelii
ENSXCOG00000015061	zmat4b	85	63.025	ENSPCAG00000004820	ZMAT4	50	63.025	Procavia_capensis
ENSXCOG00000015061	zmat4b	90	62.500	ENSPCOG00000007717	ZMAT4	80	62.500	Propithecus_coquereli
ENSXCOG00000015061	zmat4b	85	61.667	ENSPNAG00000023764	zmat4b	51	61.667	Pygocentrus_nattereri
ENSXCOG00000015061	zmat4b	100	63.309	ENSPNAG00000009604	zmat4a	52	63.309	Pygocentrus_nattereri
ENSXCOG00000015061	zmat4b	85	66.116	ENSRNOG00000042690	Zmat4	50	66.116	Rattus_norvegicus
ENSXCOG00000015061	zmat4b	92	61.538	ENSRBIG00000031887	ZMAT4	56	88.235	Rhinopithecus_bieti
ENSXCOG00000015061	zmat4b	92	61.538	ENSRROG00000040877	ZMAT4	56	88.235	Rhinopithecus_roxellana
ENSXCOG00000015061	zmat4b	92	61.538	ENSSBOG00000017391	ZMAT4	80	62.500	Saimiri_boliviensis_boliviensis
ENSXCOG00000015061	zmat4b	72	60.577	ENSSFOG00015015440	zmat4b	81	60.577	Scleropages_formosus
ENSXCOG00000015061	zmat4b	92	65.891	ENSSFOG00015013158	zmat4	53	66.667	Scleropages_formosus
ENSXCOG00000015061	zmat4b	87	72.358	ENSSMAG00000017693	zmat4a	52	72.358	Scophthalmus_maximus
ENSXCOG00000015061	zmat4b	87	72.358	ENSSDUG00000005878	zmat4a	52	72.358	Seriola_dumerili
ENSXCOG00000015061	zmat4b	98	58.394	ENSSARG00000003679	ZMAT4	57	58.394	Sorex_araneus
ENSXCOG00000015061	zmat4b	85	64.463	ENSSSCG00000007010	ZMAT4	50	64.463	Sus_scrofa
ENSXCOG00000015061	zmat4b	83	67.227	ENSTGUG00000005159	ZMAT4	50	67.227	Taeniopygia_guttata
ENSXCOG00000015061	zmat4b	87	59.350	ENSTNIG00000018863	zmat4b	52	59.350	Tetraodon_nigroviridis
ENSXCOG00000015061	zmat4b	98	56.489	ENSTBEG00000016172	ZMAT4	57	56.489	Tupaia_belangeri
ENSXCOG00000015061	zmat4b	85	65.289	ENSTTRG00000009606	ZMAT4	50	65.289	Tursiops_truncatus
ENSXCOG00000015061	zmat4b	92	60.769	ENSUMAG00000025578	ZMAT4	55	60.769	Ursus_maritimus
ENSXCOG00000015061	zmat4b	92	58.871	ENSVPAG00000009783	ZMAT4	54	58.871	Vicugna_pacos
ENSXCOG00000015061	zmat4b	92	60.769	ENSVVUG00000020407	ZMAT4	55	60.769	Vulpes_vulpes
ENSXCOG00000015061	zmat4b	100	65.468	ENSXMAG00000010461	zmat4a	52	65.468	Xiphophorus_maculatus