EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000015105 (Gene tree)
Gene ID: -
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4070 bases
Position: chrKQ557209.1:14482810-14486879
Accession: ZDB-GENE-050522-540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000020156	tRNA_Me_trans	PF03054.16	2.9e-130	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000020403	-	1260	-	ENSXCOP00000020156	419 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000015105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015105's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000015105	trmu	99	68.409	ENSG00000100416	TRMU	95	75.806	Homo_sapiens
ENSXCOG00000015105	trmu	99	86.396	ENSAPOG00000014458	trmu	99	86.396	Acanthochromis_polyacanthus
ENSXCOG00000015105	trmu	95	71.500	ENSAMEG00000003319	TRMU	95	71.500	Ailuropoda_melanoleuca
ENSXCOG00000015105	trmu	99	85.132	ENSACIG00000002101	trmu	99	85.132	Amphilophus_citrinellus
ENSXCOG00000015105	trmu	99	87.321	ENSAOCG00000013155	trmu	99	87.321	Amphiprion_ocellaris
ENSXCOG00000015105	trmu	99	87.081	ENSAPEG00000013350	trmu	99	87.081	Amphiprion_percula
ENSXCOG00000015105	trmu	99	84.019	ENSATEG00000007814	trmu	99	84.019	Anabas_testudineus
ENSXCOG00000015105	trmu	92	72.610	ENSAPLG00000016380	TRMU	98	72.610	Anas_platyrhynchos
ENSXCOG00000015105	trmu	99	69.784	ENSACAG00000007720	TRMU	99	69.784	Anolis_carolinensis
ENSXCOG00000015105	trmu	99	68.357	ENSANAG00000038053	TRMU	97	68.357	Aotus_nancymaae
ENSXCOG00000015105	trmu	99	85.851	ENSACLG00000005395	trmu	99	85.851	Astatotilapia_calliptera
ENSXCOG00000015105	trmu	99	77.240	ENSAMXG00000005282	trmu	99	77.240	Astyanax_mexicanus
ENSXCOG00000015105	trmu	99	68.884	ENSBTAG00000005595	TRMU	99	68.884	Bos_taurus
ENSXCOG00000015105	trmu	91	39.796	WBGene00007114	mttu-1	98	39.796	Caenorhabditis_elegans
ENSXCOG00000015105	trmu	99	66.507	ENSCJAG00000000198	TRMU	99	66.507	Callithrix_jacchus
ENSXCOG00000015105	trmu	96	70.792	ENSCAFG00000000779	TRMU	98	68.884	Canis_familiaris
ENSXCOG00000015105	trmu	96	70.792	ENSCAFG00020009184	TRMU	98	68.884	Canis_lupus_dingo
ENSXCOG00000015105	trmu	100	68.483	ENSCHIG00000017074	TRMU	99	68.646	Capra_hircus
ENSXCOG00000015105	trmu	96	70.149	ENSTSYG00000003853	TRMU	95	70.149	Carlito_syrichta
ENSXCOG00000015105	trmu	93	66.993	ENSCAPG00000013034	TRMU	95	66.993	Cavia_aperea
ENSXCOG00000015105	trmu	97	70.270	ENSCPOG00000020780	TRMU	95	70.270	Cavia_porcellus
ENSXCOG00000015105	trmu	96	68.905	ENSCCAG00000021641	TRMU	95	68.905	Cebus_capucinus
ENSXCOG00000015105	trmu	99	68.095	ENSCATG00000032800	TRMU	97	68.095	Cercocebus_atys
ENSXCOG00000015105	trmu	100	68.409	ENSCLAG00000017269	TRMU	99	68.409	Chinchilla_lanigera
ENSXCOG00000015105	trmu	96	70.050	ENSCSAG00000005279	TRMU	95	70.050	Chlorocebus_sabaeus
ENSXCOG00000015105	trmu	91	71.279	ENSCPBG00000011621	TRMU	96	71.279	Chrysemys_picta_bellii
ENSXCOG00000015105	trmu	94	46.348	ENSCING00000019371	-	96	46.348	Ciona_intestinalis
ENSXCOG00000015105	trmu	96	69.307	ENSCANG00000041645	TRMU	95	69.307	Colobus_angolensis_palliatus
ENSXCOG00000015105	trmu	96	69.307	ENSCGRG00001001739	Trmu	95	69.307	Cricetulus_griseus_chok1gshd
ENSXCOG00000015105	trmu	96	64.356	ENSCGRG00000002781	Trmu	95	64.356	Cricetulus_griseus_crigri
ENSXCOG00000015105	trmu	100	78.520	ENSCSEG00000012382	trmu	100	78.520	Cynoglossus_semilaevis
ENSXCOG00000015105	trmu	99	90.670	ENSCVAG00000001366	trmu	99	90.670	Cyprinodon_variegatus
ENSXCOG00000015105	trmu	99	73.747	ENSDARG00000043734	trmu	99	73.747	Danio_rerio
ENSXCOG00000015105	trmu	60	58.431	ENSDNOG00000047245	-	95	56.458	Dasypus_novemcinctus
ENSXCOG00000015105	trmu	96	69.652	ENSDORG00000007455	Trmu	97	69.652	Dipodomys_ordii
ENSXCOG00000015105	trmu	93	42.931	FBgn0040337	CG3021	95	42.931	Drosophila_melanogaster
ENSXCOG00000015105	trmu	94	55.051	ENSEBUG00000007454	trmu	100	53.429	Eptatretus_burgeri
ENSXCOG00000015105	trmu	96	71.040	ENSEASG00005021725	TRMU	95	71.040	Equus_asinus_asinus
ENSXCOG00000015105	trmu	96	71.040	ENSECAG00000000467	TRMU	95	71.040	Equus_caballus
ENSXCOG00000015105	trmu	70	52.000	ENSEEUG00000000074	-	72	52.000	Erinaceus_europaeus
ENSXCOG00000015105	trmu	99	78.043	ENSELUG00000009464	trmu	99	79.784	Esox_lucius
ENSXCOG00000015105	trmu	96	71.287	ENSFCAG00000006533	TRMU	95	71.287	Felis_catus
ENSXCOG00000015105	trmu	92	71.139	ENSFALG00000010035	TRMU	99	71.139	Ficedula_albicollis
ENSXCOG00000015105	trmu	93	68.299	ENSFDAG00000017472	TRMU	99	68.299	Fukomys_damarensis
ENSXCOG00000015105	trmu	99	89.713	ENSFHEG00000003162	trmu	98	90.811	Fundulus_heteroclitus
ENSXCOG00000015105	trmu	97	69.682	ENSGMOG00000001323	trmu	99	69.682	Gadus_morhua
ENSXCOG00000015105	trmu	99	70.755	ENSGALG00000031922	TRMU	99	70.755	Gallus_gallus
ENSXCOG00000015105	trmu	98	94.903	ENSGAFG00000013331	trmu	98	94.903	Gambusia_affinis
ENSXCOG00000015105	trmu	99	81.797	ENSGACG00000019024	trmu	99	81.797	Gasterosteus_aculeatus
ENSXCOG00000015105	trmu	99	68.409	ENSGGOG00000000203	TRMU	99	68.409	Gorilla_gorilla
ENSXCOG00000015105	trmu	99	85.372	ENSHBUG00000023421	trmu	99	85.372	Haplochromis_burtoni
ENSXCOG00000015105	trmu	99	67.221	ENSHGLG00000009278	TRMU	99	67.221	Heterocephalus_glaber_female
ENSXCOG00000015105	trmu	99	67.221	ENSHGLG00100018863	TRMU	99	67.221	Heterocephalus_glaber_male
ENSXCOG00000015105	trmu	99	83.254	ENSHCOG00000013459	trmu	99	83.254	Hippocampus_comes
ENSXCOG00000015105	trmu	96	79.353	ENSIPUG00000009785	trmu	98	79.353	Ictalurus_punctatus
ENSXCOG00000015105	trmu	99	68.646	ENSSTOG00000010993	TRMU	99	68.646	Ictidomys_tridecemlineatus
ENSXCOG00000015105	trmu	97	69.042	ENSJJAG00000000667	Trmu	96	69.042	Jaculus_jaculus
ENSXCOG00000015105	trmu	99	83.493	ENSKMAG00000008516	trmu	99	83.493	Kryptolebias_marmoratus
ENSXCOG00000015105	trmu	99	82.536	ENSLBEG00000018831	trmu	99	82.536	Labrus_bergylta
ENSXCOG00000015105	trmu	98	72.182	ENSLACG00000013713	TRMU	99	72.182	Latimeria_chalumnae
ENSXCOG00000015105	trmu	99	76.372	ENSLOCG00000016066	trmu	99	76.372	Lepisosteus_oculatus
ENSXCOG00000015105	trmu	96	60.988	ENSLAFG00000005129	TRMU	96	60.988	Loxodonta_africana
ENSXCOG00000015105	trmu	96	70.297	ENSMFAG00000039767	TRMU	95	70.297	Macaca_fascicularis
ENSXCOG00000015105	trmu	96	70.297	ENSMMUG00000000807	TRMU	95	70.297	Macaca_mulatta
ENSXCOG00000015105	trmu	96	70.297	ENSMNEG00000028164	TRMU	95	70.297	Macaca_nemestrina
ENSXCOG00000015105	trmu	99	68.095	ENSMLEG00000033884	TRMU	97	68.095	Mandrillus_leucophaeus
ENSXCOG00000015105	trmu	99	83.213	ENSMAMG00000004717	trmu	99	83.213	Mastacembelus_armatus
ENSXCOG00000015105	trmu	99	85.851	ENSMZEG00005015797	trmu	99	85.851	Maylandia_zebra
ENSXCOG00000015105	trmu	80	70.468	ENSMGAG00000007550	TRMU	99	70.468	Meleagris_gallopavo
ENSXCOG00000015105	trmu	96	69.307	ENSMAUG00000022282	Trmu	96	69.307	Mesocricetus_auratus
ENSXCOG00000015105	trmu	96	70.050	ENSMICG00000029046	TRMU	97	70.050	Microcebus_murinus
ENSXCOG00000015105	trmu	96	69.059	ENSMOCG00000014641	Trmu	96	69.059	Microtus_ochrogaster
ENSXCOG00000015105	trmu	99	81.731	ENSMMOG00000007229	trmu	99	81.731	Mola_mola
ENSXCOG00000015105	trmu	98	65.700	ENSMODG00000007433	TRMU	96	65.700	Monodelphis_domestica
ENSXCOG00000015105	trmu	99	83.254	ENSMALG00000007721	trmu	99	83.254	Monopterus_albus
ENSXCOG00000015105	trmu	98	67.150	MGP_CAROLIEiJ_G0020134	Trmu	98	67.150	Mus_caroli
ENSXCOG00000015105	trmu	99	67.548	ENSMUSG00000022386	Trmu	99	67.548	Mus_musculus
ENSXCOG00000015105	trmu	99	67.308	MGP_PahariEiJ_G0020139	Trmu	99	67.308	Mus_pahari
ENSXCOG00000015105	trmu	99	67.548	MGP_SPRETEiJ_G0021031	Trmu	99	67.548	Mus_spretus
ENSXCOG00000015105	trmu	99	68.409	ENSMPUG00000002523	TRMU	99	68.409	Mustela_putorius_furo
ENSXCOG00000015105	trmu	99	68.106	ENSNGAG00000005132	Trmu	99	68.106	Nannospalax_galili
ENSXCOG00000015105	trmu	99	85.851	ENSNBRG00000022690	trmu	99	87.345	Neolamprologus_brichardi
ENSXCOG00000015105	trmu	99	68.646	ENSNLEG00000015773	TRMU	99	68.646	Nomascus_leucogenys
ENSXCOG00000015105	trmu	79	58.434	ENSMEUG00000000216	TRMU	99	58.434	Notamacropus_eugenii
ENSXCOG00000015105	trmu	100	68.409	ENSODEG00000014745	TRMU	99	68.409	Octodon_degus
ENSXCOG00000015105	trmu	99	85.612	ENSONIG00000009821	trmu	99	85.612	Oreochromis_niloticus
ENSXCOG00000015105	trmu	93	66.410	ENSOANG00000001891	TRMU	99	66.410	Ornithorhynchus_anatinus
ENSXCOG00000015105	trmu	89	71.698	ENSOCUG00000003664	TRMU	93	69.898	Oryctolagus_cuniculus
ENSXCOG00000015105	trmu	99	80.383	ENSORLG00000019015	trmu	99	80.383	Oryzias_latipes
ENSXCOG00000015105	trmu	99	80.861	ENSORLG00020006830	trmu	99	80.861	Oryzias_latipes_hni
ENSXCOG00000015105	trmu	99	80.861	ENSORLG00015003907	trmu	99	80.861	Oryzias_latipes_hsok
ENSXCOG00000015105	trmu	59	83.065	ENSOMEG00000015541	trmu	90	83.065	Oryzias_melastigma
ENSXCOG00000015105	trmu	99	67.619	ENSOGAG00000008096	TRMU	100	67.619	Otolemur_garnettii
ENSXCOG00000015105	trmu	91	67.013	ENSOARG00000019475	TRMU	93	67.013	Ovis_aries
ENSXCOG00000015105	trmu	99	68.409	ENSPPAG00000033944	TRMU	99	68.409	Pan_paniscus
ENSXCOG00000015105	trmu	96	71.287	ENSPPRG00000004197	TRMU	98	69.359	Panthera_pardus
ENSXCOG00000015105	trmu	63	74.905	ENSPTIG00000014122	TRMU	97	74.621	Panthera_tigris_altaica
ENSXCOG00000015105	trmu	99	68.409	ENSPTRG00000014510	TRMU	99	68.409	Pan_troglodytes
ENSXCOG00000015105	trmu	100	67.696	ENSPANG00000023074	TRMU	97	67.297	Papio_anubis
ENSXCOG00000015105	trmu	99	75.422	ENSPKIG00000002849	trmu	99	75.422	Paramormyrops_kingsleyae
ENSXCOG00000015105	trmu	87	73.352	ENSPSIG00000013020	TRMU	95	73.352	Pelodiscus_sinensis
ENSXCOG00000015105	trmu	99	81.295	ENSPMGG00000004083	trmu	99	81.295	Periophthalmus_magnuspinnatus
ENSXCOG00000015105	trmu	96	69.059	ENSPEMG00000014007	Trmu	96	69.059	Peromyscus_maniculatus_bairdii
ENSXCOG00000015105	trmu	94	66.414	ENSPCIG00000009923	TRMU	93	66.250	Phascolarctos_cinereus
ENSXCOG00000015105	trmu	93	95.887	ENSPFOG00000008197	trmu	87	95.887	Poecilia_formosa
ENSXCOG00000015105	trmu	100	94.033	ENSPLAG00000008414	trmu	100	94.033	Poecilia_latipinna
ENSXCOG00000015105	trmu	99	94.019	ENSPMEG00000004326	trmu	99	94.019	Poecilia_mexicana
ENSXCOG00000015105	trmu	100	94.988	ENSPREG00000007980	trmu	100	94.988	Poecilia_reticulata
ENSXCOG00000015105	trmu	99	68.884	ENSPPYG00000011949	TRMU	99	68.884	Pongo_abelii
ENSXCOG00000015105	trmu	92	62.371	ENSPCAG00000013462	TRMU	99	62.371	Procavia_capensis
ENSXCOG00000015105	trmu	96	69.307	ENSPCOG00000016539	TRMU	96	69.307	Propithecus_coquereli
ENSXCOG00000015105	trmu	96	65.099	ENSPVAG00000013202	TRMU	99	63.658	Pteropus_vampyrus
ENSXCOG00000015105	trmu	99	85.372	ENSPNYG00000005629	trmu	99	85.372	Pundamilia_nyererei
ENSXCOG00000015105	trmu	98	77.913	ENSPNAG00000006339	trmu	96	77.913	Pygocentrus_nattereri
ENSXCOG00000015105	trmu	96	68.812	ENSRNOG00000016465	Trmu	96	68.812	Rattus_norvegicus
ENSXCOG00000015105	trmu	96	69.059	ENSRBIG00000038973	TRMU	99	65.789	Rhinopithecus_bieti
ENSXCOG00000015105	trmu	96	69.307	ENSRROG00000004267	TRMU	99	65.789	Rhinopithecus_roxellana
ENSXCOG00000015105	trmu	91	34.321	YDL033C	SLM3	91	34.321	Saccharomyces_cerevisiae
ENSXCOG00000015105	trmu	99	67.464	ENSSBOG00000030184	TRMU	99	67.464	Saimiri_boliviensis_boliviensis
ENSXCOG00000015105	trmu	91	74.803	ENSSFOG00015020664	trmu	100	74.803	Scleropages_formosus
ENSXCOG00000015105	trmu	99	82.212	ENSSMAG00000019450	trmu	99	82.212	Scophthalmus_maximus
ENSXCOG00000015105	trmu	99	86.124	ENSSDUG00000011913	trmu	99	86.124	Seriola_dumerili
ENSXCOG00000015105	trmu	99	85.885	ENSSLDG00000011684	trmu	99	85.885	Seriola_lalandi_dorsalis
ENSXCOG00000015105	trmu	98	59.564	ENSSPUG00000017123	TRMU	95	59.564	Sphenodon_punctatus
ENSXCOG00000015105	trmu	99	83.493	ENSSPAG00000021875	trmu	99	83.493	Stegastes_partitus
ENSXCOG00000015105	trmu	96	69.554	ENSSSCG00000000007	TRMU	99	67.453	Sus_scrofa
ENSXCOG00000015105	trmu	89	74.731	ENSTGUG00000003663	-	99	74.731	Taeniopygia_guttata
ENSXCOG00000015105	trmu	97	84.198	ENSTRUG00000001231	trmu	97	84.198	Takifugu_rubripes
ENSXCOG00000015105	trmu	99	82.619	ENSTNIG00000010484	trmu	98	82.619	Tetraodon_nigroviridis
ENSXCOG00000015105	trmu	71	56.303	ENSTBEG00000011276	-	77	56.303	Tupaia_belangeri
ENSXCOG00000015105	trmu	96	71.040	ENSTTRG00000004160	TRMU	95	71.040	Tursiops_truncatus
ENSXCOG00000015105	trmu	70	72.054	ENSUAMG00000024825	TRMU	97	72.054	Ursus_americanus
ENSXCOG00000015105	trmu	98	59.466	ENSUMAG00000019079	TRMU	97	73.930	Ursus_maritimus
ENSXCOG00000015105	trmu	52	62.100	ENSVPAG00000000685	-	100	62.100	Vicugna_pacos
ENSXCOG00000015105	trmu	99	68.171	ENSVVUG00000024963	TRMU	99	68.171	Vulpes_vulpes
ENSXCOG00000015105	trmu	99	71.838	ENSXETG00000023304	trmu	97	71.838	Xenopus_tropicalis
ENSXCOG00000015105	trmu	100	96.897	ENSXMAG00000006697	trmu	100	96.897	Xiphophorus_maculatus