EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000015127 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1854 bases
Position: chrKQ557221.1:17836690-17838543
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000020182	RRM_1	PF00076.22	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000020429	-	282	-	ENSXCOP00000020182	93 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000015127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015127's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000015127	-	89	67.470	ENSXCOG00000017792	-	65	67.470
ENSXCOG00000015127	-	88	93.902	ENSXCOG00000003220	-	71	93.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000015127	-	96	77.528	ENSG00000116754	SRSF11	68	77.528	Homo_sapiens
ENSXCOG00000015127	-	90	69.048	ENSG00000153914	SREK1	81	70.370	Homo_sapiens
ENSXCOG00000015127	-	92	97.674	ENSAPOG00000004488	-	79	97.647	Acanthochromis_polyacanthus
ENSXCOG00000015127	-	91	89.412	ENSAPOG00000007244	-	61	89.412	Acanthochromis_polyacanthus
ENSXCOG00000015127	-	92	97.674	ENSACIG00000018075	-	79	97.647	Amphilophus_citrinellus
ENSXCOG00000015127	-	88	69.512	ENSACIG00000015055	-	66	69.512	Amphilophus_citrinellus
ENSXCOG00000015127	-	100	87.097	ENSACIG00000012348	-	96	87.097	Amphilophus_citrinellus
ENSXCOG00000015127	-	88	70.732	ENSAOCG00000024368	-	83	70.732	Amphiprion_ocellaris
ENSXCOG00000015127	-	99	95.652	ENSAOCG00000000739	-	98	95.652	Amphiprion_ocellaris
ENSXCOG00000015127	-	94	88.506	ENSAPEG00000003142	SRSF11	90	87.356	Amphiprion_percula
ENSXCOG00000015127	-	92	97.674	ENSAPEG00000003619	SRSF11	79	97.647	Amphiprion_percula
ENSXCOG00000015127	-	87	70.370	ENSAPEG00000002218	-	88	70.370	Amphiprion_percula
ENSXCOG00000015127	-	88	69.512	ENSATEG00000009464	-	90	69.512	Anabas_testudineus
ENSXCOG00000015127	-	92	97.674	ENSATEG00000007534	-	79	97.647	Anabas_testudineus
ENSXCOG00000015127	-	98	85.714	ENSATEG00000011691	srsf11	84	85.714	Anabas_testudineus
ENSXCOG00000015127	-	90	69.048	ENSANAG00000031358	SREK1	81	70.370	Aotus_nancymaae
ENSXCOG00000015127	-	91	90.588	ENSACLG00000000623	srsf11	87	90.588	Astatotilapia_calliptera
ENSXCOG00000015127	-	88	70.732	ENSBTAG00000007321	SREK1	81	70.370	Bos_taurus
ENSXCOG00000015127	-	88	70.732	ENSCJAG00000015950	SREK1	81	70.370	Callithrix_jacchus
ENSXCOG00000015127	-	90	69.048	ENSCAFG00020019449	-	81	70.370	Canis_lupus_dingo
ENSXCOG00000015127	-	89	79.518	ENSCAFG00020017255	-	72	80.247	Canis_lupus_dingo
ENSXCOG00000015127	-	87	70.370	ENSCHIG00000025052	-	81	70.370	Capra_hircus
ENSXCOG00000015127	-	89	79.518	ENSCHIG00000025295	SRSF11	69	80.247	Capra_hircus
ENSXCOG00000015127	-	89	74.699	ENSTSYG00000033270	-	58	74.699	Carlito_syrichta
ENSXCOG00000015127	-	90	69.048	ENSTSYG00000036957	SREK1	81	70.370	Carlito_syrichta
ENSXCOG00000015127	-	90	69.048	ENSCCAG00000020591	SREK1	81	70.370	Cebus_capucinus
ENSXCOG00000015127	-	94	67.816	ENSCATG00000031482	SREK1	81	70.370	Cercocebus_atys
ENSXCOG00000015127	-	90	69.048	ENSCPBG00000026866	SREK1	64	69.048	Chrysemys_picta_bellii
ENSXCOG00000015127	-	92	72.093	ENSCPBG00000022430	-	72	75.309	Chrysemys_picta_bellii
ENSXCOG00000015127	-	90	69.048	ENSCANG00000030421	SREK1	81	70.370	Colobus_angolensis_palliatus
ENSXCOG00000015127	-	88	70.732	ENSCSEG00000013934	-	86	69.737	Cynoglossus_semilaevis
ENSXCOG00000015127	-	90	66.667	ENSCVAG00000002404	-	68	66.667	Cyprinodon_variegatus
ENSXCOG00000015127	-	97	83.333	ENSDARG00000098574	srsf11	97	83.333	Danio_rerio
ENSXCOG00000015127	-	90	67.857	ENSDORG00000023160	-	64	67.857	Dipodomys_ordii
ENSXCOG00000015127	-	90	69.048	ENSEASG00005006832	-	71	70.370	Equus_asinus_asinus
ENSXCOG00000015127	-	89	79.518	ENSEASG00005007847	SRSF11	71	80.247	Equus_asinus_asinus
ENSXCOG00000015127	-	90	69.048	ENSECAG00000035731	-	70	70.370	Equus_caballus
ENSXCOG00000015127	-	96	77.528	ENSFCAG00000034448	-	69	77.528	Felis_catus
ENSXCOG00000015127	-	87	69.136	ENSFCAG00000036884	-	81	69.136	Felis_catus
ENSXCOG00000015127	-	87	65.432	ENSFHEG00000020959	-	63	65.432	Fundulus_heteroclitus
ENSXCOG00000015127	-	88	70.732	ENSGALG00000043541	SREK1	82	70.370	Gallus_gallus
ENSXCOG00000015127	-	89	67.470	ENSGAFG00000001732	-	68	67.470	Gambusia_affinis
ENSXCOG00000015127	-	99	77.174	ENSGAGG00000022411	-	87	77.174	Gopherus_agassizii
ENSXCOG00000015127	-	90	69.048	ENSGAGG00000006087	SREK1	64	69.048	Gopherus_agassizii
ENSXCOG00000015127	-	90	69.048	ENSGGOG00000004737	SREK1	81	70.370	Gorilla_gorilla
ENSXCOG00000015127	-	90	66.667	ENSHBUG00000007082	-	63	66.667	Haplochromis_burtoni
ENSXCOG00000015127	-	88	68.293	ENSHCOG00000017228	-	76	68.293	Hippocampus_comes
ENSXCOG00000015127	-	91	88.235	ENSHCOG00000016860	-	87	88.235	Hippocampus_comes
ENSXCOG00000015127	-	88	70.732	ENSSTOG00000008850	SREK1	81	70.370	Ictidomys_tridecemlineatus
ENSXCOG00000015127	-	90	66.667	ENSJJAG00000008846	-	65	66.667	Jaculus_jaculus
ENSXCOG00000015127	-	94	88.506	ENSLBEG00000024167	srsf11	87	89.412	Labrus_bergylta
ENSXCOG00000015127	-	88	70.732	ENSLBEG00000022954	-	59	70.732	Labrus_bergylta
ENSXCOG00000015127	-	94	67.816	ENSMFAG00000039823	SREK1	81	70.370	Macaca_fascicularis
ENSXCOG00000015127	-	94	67.816	ENSMMUG00000014586	SREK1	80	67.816	Macaca_mulatta
ENSXCOG00000015127	-	94	67.816	ENSMNEG00000030723	SREK1	81	70.370	Macaca_nemestrina
ENSXCOG00000015127	-	88	70.732	ENSMLEG00000039078	SREK1	81	70.370	Mandrillus_leucophaeus
ENSXCOG00000015127	-	92	97.674	ENSMAMG00000015002	-	79	97.647	Mastacembelus_armatus
ENSXCOG00000015127	-	88	69.512	ENSMAMG00000003099	-	80	69.512	Mastacembelus_armatus
ENSXCOG00000015127	-	85	65.823	ENSMZEG00005005707	-	62	65.823	Maylandia_zebra
ENSXCOG00000015127	-	88	70.732	ENSMICG00000034959	SREK1	81	70.370	Microcebus_murinus
ENSXCOG00000015127	-	92	97.674	ENSMMOG00000016751	-	79	97.647	Mola_mola
ENSXCOG00000015127	-	92	88.372	ENSMMOG00000008877	-	85	88.372	Mola_mola
ENSXCOG00000015127	-	91	91.765	ENSMALG00000016608	srsf11	87	91.765	Monopterus_albus
ENSXCOG00000015127	-	89	65.060	ENSMALG00000017086	srek1	91	65.432	Monopterus_albus
ENSXCOG00000015127	-	96	77.528	MGP_CAROLIEiJ_G0025767	Srsf11	87	77.528	Mus_caroli
ENSXCOG00000015127	-	96	77.528	ENSMUSG00000055436	Srsf11	86	77.528	Mus_musculus
ENSXCOG00000015127	-	96	77.528	MGP_PahariEiJ_G0027217	Srsf11	87	77.528	Mus_pahari
ENSXCOG00000015127	-	96	77.528	MGP_SPRETEiJ_G0026719	Srsf11	87	77.528	Mus_spretus
ENSXCOG00000015127	-	90	67.857	ENSNGAG00000014631	-	65	66.279	Nannospalax_galili
ENSXCOG00000015127	-	100	87.097	ENSNBRG00000020213	-	96	87.097	Neolamprologus_brichardi
ENSXCOG00000015127	-	90	66.667	ENSNBRG00000010656	-	63	66.667	Neolamprologus_brichardi
ENSXCOG00000015127	-	90	69.048	ENSNLEG00000003827	SREK1	81	70.370	Nomascus_leucogenys
ENSXCOG00000015127	-	90	69.048	ENSODEG00000016218	-	79	70.370	Octodon_degus
ENSXCOG00000015127	-	91	98.824	ENSORLG00000030366	-	76	98.824	Oryzias_latipes
ENSXCOG00000015127	-	97	61.111	ENSORLG00000002711	-	74	61.111	Oryzias_latipes
ENSXCOG00000015127	-	92	98.837	ENSORLG00020009393	-	76	98.824	Oryzias_latipes_hni
ENSXCOG00000015127	-	90	67.857	ENSORLG00020012815	-	64	67.857	Oryzias_latipes_hni
ENSXCOG00000015127	-	90	67.857	ENSORLG00015020455	-	66	67.857	Oryzias_latipes_hsok
ENSXCOG00000015127	-	92	98.837	ENSORLG00015009374	-	76	98.824	Oryzias_latipes_hsok
ENSXCOG00000015127	-	90	69.048	ENSPPAG00000031605	SREK1	77	69.048	Pan_paniscus
ENSXCOG00000015127	-	88	69.512	ENSPPRG00000024617	SREK1	81	69.136	Panthera_pardus
ENSXCOG00000015127	-	88	69.512	ENSPTIG00000006608	SREK1	81	69.136	Panthera_tigris_altaica
ENSXCOG00000015127	-	90	69.048	ENSPTRG00000016936	SREK1	81	70.370	Pan_troglodytes
ENSXCOG00000015127	-	94	67.816	ENSPANG00000008953	SREK1	81	70.370	Papio_anubis
ENSXCOG00000015127	-	100	83.871	ENSPKIG00000021576	-	96	83.871	Paramormyrops_kingsleyae
ENSXCOG00000015127	-	88	96.341	ENSPMGG00000000954	-	77	96.341	Periophthalmus_magnuspinnatus
ENSXCOG00000015127	-	94	93.103	ENSPMGG00000005045	-	76	93.103	Periophthalmus_magnuspinnatus
ENSXCOG00000015127	-	89	69.880	ENSPMGG00000017029	-	72	69.880	Periophthalmus_magnuspinnatus
ENSXCOG00000015127	-	92	100.000	ENSPLAG00000009484	-	59	100.000	Poecilia_latipinna
ENSXCOG00000015127	-	89	67.470	ENSPLAG00000014609	-	61	67.470	Poecilia_latipinna
ENSXCOG00000015127	-	89	67.470	ENSPLAG00000008818	-	61	67.470	Poecilia_latipinna
ENSXCOG00000015127	-	89	67.470	ENSPMEG00000006607	-	61	67.470	Poecilia_mexicana
ENSXCOG00000015127	-	92	100.000	ENSPMEG00000023453	-	59	100.000	Poecilia_mexicana
ENSXCOG00000015127	-	91	91.765	ENSPMEG00000018837	srsf11	70	91.765	Poecilia_mexicana
ENSXCOG00000015127	-	89	67.470	ENSPMEG00000006824	-	61	67.470	Poecilia_mexicana
ENSXCOG00000015127	-	90	67.857	ENSPREG00000019922	-	67	67.857	Poecilia_reticulata
ENSXCOG00000015127	-	90	69.048	ENSPCOG00000026230	SREK1	81	70.370	Propithecus_coquereli
ENSXCOG00000015127	-	90	66.667	ENSPNYG00000007178	-	63	66.667	Pundamilia_nyererei
ENSXCOG00000015127	-	89	79.518	ENSRBIG00000042971	SRSF11	62	80.247	Rhinopithecus_bieti
ENSXCOG00000015127	-	90	69.048	ENSRBIG00000033818	SREK1	81	70.370	Rhinopithecus_bieti
ENSXCOG00000015127	-	90	69.048	ENSRROG00000017210	SREK1	81	70.370	Rhinopithecus_roxellana
ENSXCOG00000015127	-	90	69.048	ENSSBOG00000031230	SREK1	81	70.370	Saimiri_boliviensis_boliviensis
ENSXCOG00000015127	-	89	79.518	ENSSBOG00000033461	SRSF11	62	80.247	Saimiri_boliviensis_boliviensis
ENSXCOG00000015127	-	84	91.026	ENSSFOG00015016086	-	71	91.026	Scleropages_formosus
ENSXCOG00000015127	-	88	69.512	ENSSDUG00000010395	-	81	69.512	Seriola_dumerili
ENSXCOG00000015127	-	91	89.412	ENSSLDG00000015477	-	87	89.412	Seriola_lalandi_dorsalis
ENSXCOG00000015127	-	88	69.512	ENSSLDG00000016285	-	81	69.512	Seriola_lalandi_dorsalis
ENSXCOG00000015127	-	92	97.674	ENSSLDG00000012105	-	79	97.647	Seriola_lalandi_dorsalis
ENSXCOG00000015127	-	98	93.407	ENSSPAG00000016483	-	73	93.407	Stegastes_partitus
ENSXCOG00000015127	-	88	70.732	ENSSPAG00000022310	-	83	70.732	Stegastes_partitus
ENSXCOG00000015127	-	88	67.073	ENSTRUG00000022058	-	67	67.073	Takifugu_rubripes
ENSXCOG00000015127	-	88	70.732	ENSUAMG00000022662	-	75	70.732	Ursus_americanus
ENSXCOG00000015127	-	87	80.247	ENSUAMG00000008403	-	62	80.247	Ursus_americanus
ENSXCOG00000015127	-	90	69.048	ENSVVUG00000005888	-	81	70.370	Vulpes_vulpes
ENSXCOG00000015127	-	89	67.470	ENSXMAG00000028210	-	68	67.470	Xiphophorus_maculatus
ENSXCOG00000015127	-	92	100.000	ENSXMAG00000019180	SRSF11	56	100.000	Xiphophorus_maculatus