EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000015251 (Gene tree)
Gene ID: -
Gene Symbol: mrps28
Alias: zgc:152965
Full Name: mitochondrial ribosomal protein S28
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5302 bases
Position: chrKQ557225.1:28026955-28032256
Accession: ZDB-GENE-061110-52
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000020348	MRP-S35	PF10246.9	3.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000020596	-	561	-	ENSXCOP00000020348	186 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000015251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015251's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000015251	mrps28	69	58.209	ENSG00000147586	MRPS28	83	68.605	Homo_sapiens
ENSXCOG00000015251	mrps28	85	63.415	ENSACIG00000007839	mrps28	94	63.415	Amphilophus_citrinellus
ENSXCOG00000015251	mrps28	85	61.585	ENSAOCG00000000705	mrps28	94	59.146	Amphiprion_ocellaris
ENSXCOG00000015251	mrps28	85	61.585	ENSAPEG00000016051	mrps28	94	59.146	Amphiprion_percula
ENSXCOG00000015251	mrps28	85	61.628	ENSATEG00000015295	mrps28	94	61.628	Anabas_testudineus
ENSXCOG00000015251	mrps28	71	53.623	ENSAMXG00000026324	mrps28	57	62.264	Astyanax_mexicanus
ENSXCOG00000015251	mrps28	65	58.065	ENSBTAG00000001302	MRPS28	62	57.025	Bos_taurus
ENSXCOG00000015251	mrps28	72	53.237	ENSCAFG00000008393	MRPS28	65	56.198	Canis_familiaris
ENSXCOG00000015251	mrps28	72	53.237	ENSCAFG00020017987	MRPS28	65	56.198	Canis_lupus_dingo
ENSXCOG00000015251	mrps28	65	57.258	ENSCHIG00000018727	MRPS28	63	56.198	Capra_hircus
ENSXCOG00000015251	mrps28	71	47.015	ENSTSYG00000031343	-	60	50.877	Carlito_syrichta
ENSXCOG00000015251	mrps28	69	54.264	ENSCCAG00000022534	MRPS28	65	70.886	Cebus_capucinus
ENSXCOG00000015251	mrps28	65	60.331	ENSCHOG00000004885	MRPS28	61	60.000	Choloepus_hoffmanni
ENSXCOG00000015251	mrps28	78	54.054	ENSCGRG00001018741	Mrps28	79	54.054	Cricetulus_griseus_chok1gshd
ENSXCOG00000015251	mrps28	74	50.345	ENSDARG00000041538	mrps28	82	50.345	Danio_rerio
ENSXCOG00000015251	mrps28	65	57.851	ENSDORG00000002762	Mrps28	61	56.667	Dipodomys_ordii
ENSXCOG00000015251	mrps28	77	44.667	FBgn0034361	mRpS28	59	50.000	Drosophila_melanogaster
ENSXCOG00000015251	mrps28	67	54.198	ENSEBUG00000010846	mrps28	60	64.356	Eptatretus_burgeri
ENSXCOG00000015251	mrps28	72	56.835	ENSEASG00005020574	MRPS28	63	57.851	Equus_asinus_asinus
ENSXCOG00000015251	mrps28	72	56.835	ENSECAG00000015430	MRPS28	63	57.851	Equus_caballus
ENSXCOG00000015251	mrps28	67	56.923	ENSFCAG00000032510	MRPS28	79	53.548	Felis_catus
ENSXCOG00000015251	mrps28	56	62.832	ENSFALG00000008608	MRPS28	85	62.832	Ficedula_albicollis
ENSXCOG00000015251	mrps28	69	57.692	ENSFDAG00000013634	MRPS28	77	53.378	Fukomys_damarensis
ENSXCOG00000015251	mrps28	92	86.628	ENSGAFG00000014759	mrps28	90	86.628	Gambusia_affinis
ENSXCOG00000015251	mrps28	73	65.957	ENSGACG00000019939	mrps28	78	65.306	Gasterosteus_aculeatus
ENSXCOG00000015251	mrps28	72	57.037	ENSHGLG00000009986	MRPS28	64	52.027	Heterocephalus_glaber_female
ENSXCOG00000015251	mrps28	72	57.037	ENSHGLG00100019258	MRPS28	64	52.027	Heterocephalus_glaber_male
ENSXCOG00000015251	mrps28	85	51.515	ENSHCOG00000011561	mrps28	93	51.515	Hippocampus_comes
ENSXCOG00000015251	mrps28	85	47.159	ENSIPUG00000012566	mrps28	62	57.018	Ictalurus_punctatus
ENSXCOG00000015251	mrps28	85	64.634	ENSKMAG00000006636	mrps28	84	64.634	Kryptolebias_marmoratus
ENSXCOG00000015251	mrps28	65	56.198	ENSLACG00000014702	MRPS28	62	56.410	Latimeria_chalumnae
ENSXCOG00000015251	mrps28	71	57.432	ENSLOCG00000017359	mrps28	53	68.627	Lepisosteus_oculatus
ENSXCOG00000015251	mrps28	78	53.378	ENSMAUG00000009465	Mrps28	62	58.974	Mesocricetus_auratus
ENSXCOG00000015251	mrps28	69	58.594	ENSMICG00000044873	MRPS28	79	51.316	Microcebus_murinus
ENSXCOG00000015251	mrps28	78	53.289	ENSMOCG00000021930	Mrps28	62	58.678	Microtus_ochrogaster
ENSXCOG00000015251	mrps28	85	51.412	ENSMODG00000006621	MRPS28	91	49.718	Monodelphis_domestica
ENSXCOG00000015251	mrps28	52	67.647	ENSMALG00000006494	mrps28	77	67.647	Monopterus_albus
ENSXCOG00000015251	mrps28	65	59.016	MGP_CAROLIEiJ_G0024833	Mrps28	62	58.621	Mus_caroli
ENSXCOG00000015251	mrps28	65	59.016	ENSMUSG00000040269	Mrps28	62	58.621	Mus_musculus
ENSXCOG00000015251	mrps28	65	58.537	MGP_PahariEiJ_G0026281	Mrps28	62	58.621	Mus_pahari
ENSXCOG00000015251	mrps28	65	59.016	MGP_SPRETEiJ_G0025763	Mrps28	62	58.621	Mus_spretus
ENSXCOG00000015251	mrps28	65	56.000	ENSMPUG00000001853	MRPS28	80	51.948	Mustela_putorius_furo
ENSXCOG00000015251	mrps28	70	58.824	ENSMLUG00000015175	MRPS28	63	59.504	Myotis_lucifugus
ENSXCOG00000015251	mrps28	65	59.016	ENSNGAG00000000216	Mrps28	85	50.888	Nannospalax_galili
ENSXCOG00000015251	mrps28	85	57.927	ENSNBRG00000021393	mrps28	94	57.927	Neolamprologus_brichardi
ENSXCOG00000015251	mrps28	86	53.409	ENSMEUG00000007676	MRPS28	94	52.000	Notamacropus_eugenii
ENSXCOG00000015251	mrps28	80	54.305	ENSODEG00000005701	MRPS28	61	58.621	Octodon_degus
ENSXCOG00000015251	mrps28	65	65.873	ENSONIG00000020758	mrps28	94	58.537	Oreochromis_niloticus
ENSXCOG00000015251	mrps28	65	59.843	ENSOCUG00000000867	MRPS28	66	60.000	Oryctolagus_cuniculus
ENSXCOG00000015251	mrps28	84	60.606	ENSORLG00000026843	mrps28	88	60.606	Oryzias_latipes
ENSXCOG00000015251	mrps28	83	63.190	ENSORLG00020022089	mrps28	90	63.190	Oryzias_latipes_hni
ENSXCOG00000015251	mrps28	65	68.254	ENSOMEG00000008250	mrps28	65	68.376	Oryzias_melastigma
ENSXCOG00000015251	mrps28	68	57.576	ENSOGAG00000016599	MRPS28	92	48.588	Otolemur_garnettii
ENSXCOG00000015251	mrps28	67	56.923	ENSPPRG00000009220	MRPS28	79	53.548	Panthera_pardus
ENSXCOG00000015251	mrps28	67	56.923	ENSPTIG00000019934	MRPS28	79	53.548	Panthera_tigris_altaica
ENSXCOG00000015251	mrps28	85	50.299	ENSPMGG00000008007	-	92	50.299	Periophthalmus_magnuspinnatus
ENSXCOG00000015251	mrps28	65	59.055	ENSPEMG00000012338	Mrps28	62	58.678	Peromyscus_maniculatus_bairdii
ENSXCOG00000015251	mrps28	77	54.938	ENSPCIG00000026795	MRPS28	85	54.938	Phascolarctos_cinereus
ENSXCOG00000015251	mrps28	85	94.304	ENSPFOG00000020828	mrps28	91	94.304	Poecilia_formosa
ENSXCOG00000015251	mrps28	85	94.304	ENSPLAG00000005387	mrps28	91	94.304	Poecilia_latipinna
ENSXCOG00000015251	mrps28	85	94.937	ENSPMEG00000022332	mrps28	96	94.937	Poecilia_mexicana
ENSXCOG00000015251	mrps28	76	92.199	ENSPREG00000005690	mrps28	82	92.199	Poecilia_reticulata
ENSXCOG00000015251	mrps28	69	57.812	ENSPPYG00000018694	MRPS28	52	66.316	Pongo_abelii
ENSXCOG00000015251	mrps28	69	60.938	ENSPCOG00000003866	MRPS28	78	55.172	Propithecus_coquereli
ENSXCOG00000015251	mrps28	70	56.923	ENSPVAG00000007815	MRPS28	62	57.391	Pteropus_vampyrus
ENSXCOG00000015251	mrps28	65	58.647	ENSPNAG00000018621	mrps28	67	58.400	Pygocentrus_nattereri
ENSXCOG00000015251	mrps28	65	59.836	ENSRNOG00000032630	Mrps28	61	59.483	Rattus_norvegicus
ENSXCOG00000015251	mrps28	69	53.435	ENSSBOG00000028198	MRPS28	64	69.620	Saimiri_boliviensis_boliviensis
ENSXCOG00000015251	mrps28	65	67.460	ENSSMAG00000021042	mrps28	68	67.521	Scophthalmus_maximus
ENSXCOG00000015251	mrps28	69	65.926	ENSSDUG00000021722	mrps28	65	69.231	Seriola_dumerili
ENSXCOG00000015251	mrps28	85	57.803	ENSSLDG00000013261	mrps28	94	58.382	Seriola_lalandi_dorsalis
ENSXCOG00000015251	mrps28	60	45.736	ENSSLDG00000003091	-	98	46.512	Seriola_lalandi_dorsalis
ENSXCOG00000015251	mrps28	65	57.480	ENSSARG00000007429	MRPS28	62	57.500	Sorex_araneus
ENSXCOG00000015251	mrps28	65	69.048	ENSSPAG00000003194	mrps28	67	69.231	Stegastes_partitus
ENSXCOG00000015251	mrps28	65	57.258	ENSSSCG00000037782	MRPS28	62	56.780	Sus_scrofa
ENSXCOG00000015251	mrps28	85	52.601	ENSTRUG00000012758	mrps28	94	52.601	Takifugu_rubripes
ENSXCOG00000015251	mrps28	65	56.667	ENSTBEG00000010380	MRPS28	92	47.059	Tupaia_belangeri
ENSXCOG00000015251	mrps28	65	55.372	ENSTTRG00000000087	MRPS28	61	55.652	Tursiops_truncatus
ENSXCOG00000015251	mrps28	65	56.349	ENSUAMG00000018127	MRPS28	80	51.923	Ursus_americanus
ENSXCOG00000015251	mrps28	65	56.349	ENSUMAG00000014927	MRPS28	80	51.923	Ursus_maritimus
ENSXCOG00000015251	mrps28	80	54.362	ENSVPAG00000000652	MRPS28	92	45.294	Vicugna_pacos
ENSXCOG00000015251	mrps28	72	52.593	ENSVVUG00000000384	MRPS28	65	55.556	Vulpes_vulpes