EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000015338 (Gene tree)
Gene ID: -
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine/arginine-rich splicing factor 5a
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3568 bases
Position: chrKQ557225.1:28540236-28543803
Accession: ZDB-GENE-030131-7336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000020474	RRM_1	PF00076.22	4.5e-32	1	2
ENSXCOP00000020474	RRM_1	PF00076.22	4.5e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000020724	-	918	-	ENSXCOP00000020474	305 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000015338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000015338	srsf5a	84	39.080	ENSXCOG00000017888	-	70	44.134
ENSXCOG00000015338	srsf5a	60	63.587	ENSXCOG00000018826	srsf4	89	61.290
ENSXCOG00000015338	srsf5a	92	54.064	ENSXCOG00000001570	srsf5b	63	67.742
ENSXCOG00000015338	srsf5a	74	36.596	ENSXCOG00000009643	-	68	41.899
ENSXCOG00000015338	srsf5a	60	59.783	ENSXCOG00000003212	-	54	58.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000015338	srsf5a	100	77.170	ENSAPOG00000017395	srsf5a	90	77.936	Acanthochromis_polyacanthus
ENSXCOG00000015338	srsf5a	85	76.357	ENSACIG00000011892	srsf5a	98	76.471	Amphilophus_citrinellus
ENSXCOG00000015338	srsf5a	78	82.353	ENSAOCG00000014967	srsf5a	82	81.967	Amphiprion_ocellaris
ENSXCOG00000015338	srsf5a	78	82.353	ENSAPEG00000009297	srsf5a	82	81.967	Amphiprion_percula
ENSXCOG00000015338	srsf5a	79	81.855	ENSATEG00000000198	srsf5a	84	82.377	Anabas_testudineus
ENSXCOG00000015338	srsf5a	61	71.429	ENSAPLG00000002469	-	70	68.783	Anas_platyrhynchos
ENSXCOG00000015338	srsf5a	61	74.866	ENSACAG00000029015	-	68	73.262	Anolis_carolinensis
ENSXCOG00000015338	srsf5a	78	83.673	ENSACLG00000027166	srsf5a	82	82.869	Astatotilapia_calliptera
ENSXCOG00000015338	srsf5a	61	74.874	ENSAMXG00000030476	srsf5a	91	58.498	Astyanax_mexicanus
ENSXCOG00000015338	srsf5a	61	73.404	ENSCPBG00000021518	-	70	72.193	Chrysemys_picta_bellii
ENSXCOG00000015338	srsf5a	61	56.633	ENSCSAVG00000011376	-	78	55.446	Ciona_savignyi
ENSXCOG00000015338	srsf5a	79	86.290	ENSCSEG00000008109	srsf5a	79	84.861	Cynoglossus_semilaevis
ENSXCOG00000015338	srsf5a	78	90.612	ENSCVAG00000016982	srsf5a	98	88.321	Cyprinodon_variegatus
ENSXCOG00000015338	srsf5a	61	77.320	ENSDARG00000029818	srsf5a	100	73.529	Danio_rerio
ENSXCOG00000015338	srsf5a	61	75.000	ENSELUG00000020439	srsf5a	62	78.351	Esox_lucius
ENSXCOG00000015338	srsf5a	65	63.877	ENSFALG00000005098	-	64	69.519	Ficedula_albicollis
ENSXCOG00000015338	srsf5a	99	73.199	ENSFHEG00000003955	srsf5a	97	86.897	Fundulus_heteroclitus
ENSXCOG00000015338	srsf5a	61	78.610	ENSGMOG00000000869	srsf5a	94	78.610	Gadus_morhua
ENSXCOG00000015338	srsf5a	65	67.677	ENSGALG00000033259	SRSF5A	63	71.123	Gallus_gallus
ENSXCOG00000015338	srsf5a	93	80.132	ENSGAFG00000018237	srsf5a	94	69.307	Gambusia_affinis
ENSXCOG00000015338	srsf5a	61	82.353	ENSGACG00000011761	srsf5a	70	82.353	Gasterosteus_aculeatus
ENSXCOG00000015338	srsf5a	61	73.404	ENSGAGG00000007312	-	70	72.193	Gopherus_agassizii
ENSXCOG00000015338	srsf5a	78	83.265	ENSHBUG00000014048	srsf5a	82	82.869	Haplochromis_burtoni
ENSXCOG00000015338	srsf5a	77	82.305	ENSHCOG00000017557	srsf5a	93	73.310	Hippocampus_comes
ENSXCOG00000015338	srsf5a	91	57.576	ENSIPUG00000003439	srsf5a	69	78.351	Ictalurus_punctatus
ENSXCOG00000015338	srsf5a	61	82.199	ENSKMAG00000014937	srsf5a	73	78.715	Kryptolebias_marmoratus
ENSXCOG00000015338	srsf5a	61	81.026	ENSLBEG00000017153	srsf5a	74	82.564	Labrus_bergylta
ENSXCOG00000015338	srsf5a	61	76.316	ENSLACG00000017874	-	72	76.316	Latimeria_chalumnae
ENSXCOG00000015338	srsf5a	61	76.562	ENSLOCG00000014075	srsf5a	96	60.065	Lepisosteus_oculatus
ENSXCOG00000015338	srsf5a	79	79.668	ENSMAMG00000000192	srsf5a	92	75.089	Mastacembelus_armatus
ENSXCOG00000015338	srsf5a	78	83.265	ENSMZEG00005010485	srsf5a	82	82.869	Maylandia_zebra
ENSXCOG00000015338	srsf5a	65	69.500	ENSMGAG00000011888	-	96	71.006	Meleagris_gallopavo
ENSXCOG00000015338	srsf5a	61	82.888	ENSMMOG00000009793	srsf5a	90	76.157	Mola_mola
ENSXCOG00000015338	srsf5a	79	77.500	ENSMALG00000021194	srsf5a	90	71.731	Monopterus_albus
ENSXCOG00000015338	srsf5a	78	82.857	ENSNBRG00000000771	srsf5a	82	82.072	Neolamprologus_brichardi
ENSXCOG00000015338	srsf5a	78	82.857	ENSONIG00000019583	srsf5a	82	82.072	Oreochromis_niloticus
ENSXCOG00000015338	srsf5a	78	81.633	ENSORLG00000009268	srsf5a	85	82.377	Oryzias_latipes
ENSXCOG00000015338	srsf5a	78	81.633	ENSORLG00020003281	srsf5	85	82.377	Oryzias_latipes_hni
ENSXCOG00000015338	srsf5a	78	81.633	ENSORLG00015023075	srsf5	85	82.377	Oryzias_latipes_hsok
ENSXCOG00000015338	srsf5a	61	80.412	ENSOMEG00000000628	srsf5a	85	81.967	Oryzias_melastigma
ENSXCOG00000015338	srsf5a	61	77.720	ENSPKIG00000002054	srsf5a	68	75.401	Paramormyrops_kingsleyae
ENSXCOG00000015338	srsf5a	61	71.809	ENSPSIG00000008238	-	93	69.200	Pelodiscus_sinensis
ENSXCOG00000015338	srsf5a	62	73.684	ENSPMGG00000020125	srsf5a	73	62.800	Periophthalmus_magnuspinnatus
ENSXCOG00000015338	srsf5a	100	90.402	ENSPFOG00000022993	srsf5a	100	80.625	Poecilia_formosa
ENSXCOG00000015338	srsf5a	99	90.373	ENSPLAG00000005508	srsf5a	99	80.564	Poecilia_latipinna
ENSXCOG00000015338	srsf5a	100	91.022	ENSPMEG00000016339	srsf5a	100	80.938	Poecilia_mexicana
ENSXCOG00000015338	srsf5a	100	92.476	ENSPREG00000018091	srsf5a	100	81.818	Poecilia_reticulata
ENSXCOG00000015338	srsf5a	78	83.265	ENSPNYG00000021245	srsf5a	82	82.869	Pundamilia_nyererei
ENSXCOG00000015338	srsf5a	61	78.610	ENSPNAG00000021333	srsf5a	66	78.610	Pygocentrus_nattereri
ENSXCOG00000015338	srsf5a	61	77.202	ENSSFOG00015008377	srsf5	66	78.610	Scleropages_formosus
ENSXCOG00000015338	srsf5a	78	79.365	ENSSMAG00000010899	srsf5a	84	82.946	Scophthalmus_maximus
ENSXCOG00000015338	srsf5a	79	80.083	ENSSDUG00000006103	srsf5a	90	77.224	Seriola_dumerili
ENSXCOG00000015338	srsf5a	79	80.498	ENSSLDG00000004146	srsf5a	90	77.580	Seriola_lalandi_dorsalis
ENSXCOG00000015338	srsf5a	61	71.123	ENSSPUG00000002052	-	68	69.519	Sphenodon_punctatus
ENSXCOG00000015338	srsf5a	78	80.672	ENSSPAG00000002821	srsf5a	82	80.328	Stegastes_partitus
ENSXCOG00000015338	srsf5a	79	81.377	ENSTRUG00000022908	srsf5a	83	80.876	Takifugu_rubripes
ENSXCOG00000015338	srsf5a	61	71.282	ENSXETG00000017937	srsf5a	72	71.282	Xenopus_tropicalis
ENSXCOG00000015338	srsf5a	100	95.268	ENSXMAG00000012823	srsf5a	100	95.268	Xiphophorus_maculatus