EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000015435 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2667 bases
Position: chrKQ557218.1:17243596-17246262
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000020601	zf-C2H2	PF00096.26	3.1e-18	1	3
ENSXCOP00000020601	zf-C2H2	PF00096.26	3.1e-18	2	3
ENSXCOP00000020601	zf-C2H2	PF00096.26	3.1e-18	3	3
ENSXCOP00000020601	zf-met	PF12874.7	7.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000020851	-	312	-	ENSXCOP00000020601	103 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000015435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000015435	-	79	51.786	ENSXCOG00000016117	-	93	51.786
ENSXCOG00000015435	-	83	48.276	ENSXCOG00000017328	-	76	48.276
ENSXCOG00000015435	-	81	43.210	ENSXCOG00000019457	-	85	42.169
ENSXCOG00000015435	-	88	55.738	ENSXCOG00000016307	-	85	50.000
ENSXCOG00000015435	-	81	44.444	ENSXCOG00000007937	-	76	44.444
ENSXCOG00000015435	-	92	41.975	ENSXCOG00000001116	-	89	49.383
ENSXCOG00000015435	-	81	37.681	ENSXCOG00000003435	-	71	37.681
ENSXCOG00000015435	-	79	47.458	ENSXCOG00000007139	-	68	47.458
ENSXCOG00000015435	-	82	47.619	ENSXCOG00000019481	-	78	47.619
ENSXCOG00000015435	-	82	54.054	ENSXCOG00000019484	-	85	54.054
ENSXCOG00000015435	-	79	44.643	ENSXCOG00000007413	-	64	44.643
ENSXCOG00000015435	-	81	48.214	ENSXCOG00000010488	-	54	48.214
ENSXCOG00000015435	-	79	41.975	ENSXCOG00000014361	-	56	41.975
ENSXCOG00000015435	-	81	51.786	ENSXCOG00000015947	-	92	51.786
ENSXCOG00000015435	-	95	51.613	ENSXCOG00000019401	-	64	51.613
ENSXCOG00000015435	-	81	48.214	ENSXCOG00000010950	si:dkey-210j14.3	54	48.214
ENSXCOG00000015435	-	79	48.214	ENSXCOG00000009674	-	68	48.214
ENSXCOG00000015435	-	81	48.148	ENSXCOG00000002512	-	71	48.148
ENSXCOG00000015435	-	83	41.250	ENSXCOG00000007076	-	97	41.250
ENSXCOG00000015435	-	96	46.914	ENSXCOG00000001226	-	88	44.444
ENSXCOG00000015435	-	83	50.000	ENSXCOG00000016567	-	75	50.000
ENSXCOG00000015435	-	92	49.206	ENSXCOG00000016860	-	99	49.206
ENSXCOG00000015435	-	93	49.315	ENSXCOG00000007994	-	88	49.315
ENSXCOG00000015435	-	89	51.786	ENSXCOG00000000528	-	78	51.786
ENSXCOG00000015435	-	81	48.214	ENSXCOG00000019482	-	80	48.214
ENSXCOG00000015435	-	82	48.214	ENSXCOG00000009186	-	82	48.214
ENSXCOG00000015435	-	79	41.975	ENSXCOG00000009992	zbtb47b	65	41.975
ENSXCOG00000015435	-	92	38.272	ENSXCOG00000006614	-	92	44.444
ENSXCOG00000015435	-	81	46.575	ENSXCOG00000007529	-	94	46.575
ENSXCOG00000015435	-	79	47.143	ENSXCOG00000009003	-	88	46.914
ENSXCOG00000015435	-	79	43.210	ENSXCOG00000009772	-	66	43.210
ENSXCOG00000015435	-	95	41.667	ENSXCOG00000007414	-	81	41.667
ENSXCOG00000015435	-	72	35.135	ENSXCOG00000015428	-	76	35.135
ENSXCOG00000015435	-	85	53.659	ENSXCOG00000006553	-	83	50.000
ENSXCOG00000015435	-	67	38.961	ENSXCOG00000018615	-	59	38.961
ENSXCOG00000015435	-	79	50.000	ENSXCOG00000007981	-	84	50.000
ENSXCOG00000015435	-	98	51.220	ENSXCOG00000010567	-	91	45.946
ENSXCOG00000015435	-	84	49.153	ENSXCOG00000003451	-	79	44.828
ENSXCOG00000015435	-	80	55.263	ENSXCOG00000002898	-	77	55.263
ENSXCOG00000015435	-	81	44.444	ENSXCOG00000003537	-	73	44.444
ENSXCOG00000015435	-	81	46.914	ENSXCOG00000007941	-	88	46.914
ENSXCOG00000015435	-	81	45.679	ENSXCOG00000017871	zgc:113343	62	45.679
ENSXCOG00000015435	-	81	48.148	ENSXCOG00000007396	-	84	48.148
ENSXCOG00000015435	-	82	45.122	ENSXCOG00000018253	-	90	45.122
ENSXCOG00000015435	-	83	46.914	ENSXCOG00000007368	-	92	46.914
ENSXCOG00000015435	-	79	64.516	ENSXCOG00000019492	-	96	43.210
ENSXCOG00000015435	-	83	44.444	ENSXCOG00000006951	-	68	44.444
ENSXCOG00000015435	-	79	48.148	ENSXCOG00000001292	-	78	48.148
ENSXCOG00000015435	-	97	47.887	ENSXCOG00000013870	-	59	47.887
ENSXCOG00000015435	-	83	51.351	ENSXCOG00000008978	-	92	43.750
ENSXCOG00000015435	-	54	63.333	ENSXCOG00000016589	-	93	63.333
ENSXCOG00000015435	-	81	44.643	ENSXCOG00000007979	-	57	44.643
ENSXCOG00000015435	-	83	47.917	ENSXCOG00000015441	-	84	47.917
ENSXCOG00000015435	-	79	53.571	ENSXCOG00000019382	-	64	53.571
ENSXCOG00000015435	-	82	47.273	ENSXCOG00000009665	-	76	47.273
ENSXCOG00000015435	-	81	51.786	ENSXCOG00000003431	-	79	51.786
ENSXCOG00000015435	-	80	46.914	ENSXCOG00000011372	-	78	46.914
ENSXCOG00000015435	-	93	54.795	ENSXCOG00000008083	-	90	53.086
ENSXCOG00000015435	-	81	46.835	ENSXCOG00000000354	-	70	46.835
ENSXCOG00000015435	-	82	48.276	ENSXCOG00000002857	-	94	48.193
ENSXCOG00000015435	-	79	40.506	ENSXCOG00000000254	-	62	40.506
ENSXCOG00000015435	-	84	48.611	ENSXCOG00000019443	-	95	46.914
ENSXCOG00000015435	-	81	47.458	ENSXCOG00000003538	-	96	43.333
ENSXCOG00000015435	-	81	40.244	ENSXCOG00000002869	-	50	39.286
ENSXCOG00000015435	-	89	44.578	ENSXCOG00000007957	-	83	46.296
ENSXCOG00000015435	-	81	46.296	ENSXCOG00000009785	-	61	46.296
ENSXCOG00000015435	-	80	48.780	ENSXCOG00000008062	-	96	48.780
ENSXCOG00000015435	-	96	48.148	ENSXCOG00000003472	-	81	48.148
ENSXCOG00000015435	-	87	43.210	ENSXCOG00000011725	-	93	42.683
ENSXCOG00000015435	-	79	57.143	ENSXCOG00000003499	-	51	57.143
ENSXCOG00000015435	-	81	48.214	ENSXCOG00000003468	-	78	42.169
ENSXCOG00000015435	-	83	44.578	ENSXCOG00000013004	-	74	44.578
ENSXCOG00000015435	-	79	43.210	ENSXCOG00000014363	-	55	43.210
ENSXCOG00000015435	-	83	46.341	ENSXCOG00000007376	-	91	46.341
ENSXCOG00000015435	-	80	45.205	ENSXCOG00000015312	-	84	45.205
ENSXCOG00000015435	-	97	45.783	ENSXCOG00000008116	-	84	45.783
ENSXCOG00000015435	-	88	48.214	ENSXCOG00000001200	-	97	48.214
ENSXCOG00000015435	-	79	51.429	ENSXCOG00000019377	-	90	47.273
ENSXCOG00000015435	-	86	42.593	ENSXCOG00000020768	-	67	42.593
ENSXCOG00000015435	-	81	44.828	ENSXCOG00000012921	-	94	42.553
ENSXCOG00000015435	-	83	46.552	ENSXCOG00000007406	-	98	45.783
ENSXCOG00000015435	-	83	49.383	ENSXCOG00000002473	-	82	49.383
ENSXCOG00000015435	-	54	42.857	ENSXCOG00000007420	-	93	42.857
ENSXCOG00000015435	-	79	46.296	ENSXCOG00000020769	-	69	46.296
ENSXCOG00000015435	-	87	43.103	ENSXCOG00000003001	-	52	37.634

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000015435	-	80	50.617	ENSDARG00000103244	CABZ01081752.3	83	50.617	Danio_rerio
ENSXCOG00000015435	-	89	53.571	ENSDARG00000104407	BX649453.1	78	53.571	Danio_rerio
ENSXCOG00000015435	-	84	44.643	ENSDARG00000098901	CABZ01002768.1	77	44.444	Danio_rerio
ENSXCOG00000015435	-	89	46.914	ENSDARG00000114437	zgc:173705	76	46.914	Danio_rerio
ENSXCOG00000015435	-	85	57.143	ENSDARG00000100001	znf1096	79	57.143	Danio_rerio
ENSXCOG00000015435	-	83	48.980	ENSDARG00000112725	si:dkey-22h13.2	76	48.980	Danio_rerio
ENSXCOG00000015435	-	81	44.898	ENSDARG00000096189	si:dkey-54j5.2	68	44.898	Danio_rerio
ENSXCOG00000015435	-	81	45.783	ENSDARG00000105137	zgc:173705	76	45.783	Danio_rerio
ENSXCOG00000015435	-	79	46.250	ENSDARG00000116920	BX465848.2	74	46.250	Danio_rerio
ENSXCOG00000015435	-	81	45.783	ENSDARG00000109381	CU457778.2	68	45.783	Danio_rerio
ENSXCOG00000015435	-	81	48.276	ENSDARG00000116177	znf1127	83	48.276	Danio_rerio
ENSXCOG00000015435	-	81	46.914	ENSDARG00000098087	si:dkey-30f3.2	70	46.914	Danio_rerio
ENSXCOG00000015435	-	81	48.214	ENSDARG00000091393	si:ch211-161m3.6	64	48.214	Danio_rerio
ENSXCOG00000015435	-	81	44.898	ENSDARG00000115450	CABZ01012382.1	76	44.898	Danio_rerio
ENSXCOG00000015435	-	79	93.103	ENSGMOG00000020024	-	100	93.103	Gadus_morhua
ENSXCOG00000015435	-	79	43.750	ENSKMAG00000011441	-	64	43.750	Kryptolebias_marmoratus
ENSXCOG00000015435	-	83	44.444	ENSPFOG00000022423	-	77	44.444	Poecilia_formosa
ENSXCOG00000015435	-	79	43.636	ENSPFOG00000003366	-	70	43.636	Poecilia_formosa
ENSXCOG00000015435	-	79	46.774	ENSPLAG00000023537	-	53	46.774	Poecilia_latipinna
ENSXCOG00000015435	-	84	55.556	ENSPREG00000005015	-	94	44.286	Poecilia_reticulata
ENSXCOG00000015435	-	81	91.566	ENSTRUG00000022969	-	64	91.566	Takifugu_rubripes
ENSXCOG00000015435	-	82	60.714	ENSXETG00000031310	-	57	60.714	Xenopus_tropicalis