EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000015467 (Gene tree)
Gene ID: -
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt-like transcription factor 4
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5319 bases
Position: chrKQ557201.1:25932312-25937630
Accession: ZDB-GENE-060328-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000020644	zf-C2H2	PF00096.26	1.5e-20	1	4
ENSXCOP00000020644	zf-C2H2	PF00096.26	1.5e-20	2	4
ENSXCOP00000020644	zf-C2H2	PF00096.26	1.5e-20	3	4
ENSXCOP00000020644	zf-C2H2	PF00096.26	1.5e-20	4	4
ENSXCOP00000020644	zf-met	PF12874.7	2.9e-10	1	2
ENSXCOP00000020644	zf-met	PF12874.7	2.9e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000020895	-	3078	-	ENSXCOP00000020644	1025 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000015467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015467's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000015467	sall4	84	65.385	ENSXCOG00000016907	sall3a	71	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000015467	sall4	100	41.489	ENSG00000101115	SALL4	100	44.737	Homo_sapiens
ENSXCOG00000015467	sall4	100	71.915	ENSAPOG00000002465	sall4	100	71.087	Acanthochromis_polyacanthus
ENSXCOG00000015467	sall4	100	42.096	ENSAMEG00000013250	-	100	41.667	Ailuropoda_melanoleuca
ENSXCOG00000015467	sall4	100	69.450	ENSACIG00000017298	sall4	100	69.450	Amphilophus_citrinellus
ENSXCOG00000015467	sall4	100	72.560	ENSAOCG00000023678	sall4	100	71.915	Amphiprion_ocellaris
ENSXCOG00000015467	sall4	100	72.744	ENSAPEG00000000751	sall4	100	72.099	Amphiprion_percula
ENSXCOG00000015467	sall4	100	71.048	ENSATEG00000024480	sall4	100	70.956	Anabas_testudineus
ENSXCOG00000015467	sall4	100	48.313	ENSAPLG00000006498	SALL4	100	48.413	Anas_platyrhynchos
ENSXCOG00000015467	sall4	100	47.437	ENSACAG00000012748	SALL4	100	47.615	Anolis_carolinensis
ENSXCOG00000015467	sall4	100	41.984	ENSANAG00000023352	SALL4	75	67.308	Aotus_nancymaae
ENSXCOG00000015467	sall4	100	69.936	ENSACLG00000017851	sall4	100	69.936	Astatotilapia_calliptera
ENSXCOG00000015467	sall4	99	58.818	ENSAMXG00000001254	sall4	99	59.445	Astyanax_mexicanus
ENSXCOG00000015467	sall4	100	40.869	ENSBTAG00000003101	SALL4	100	41.156	Bos_taurus
ENSXCOG00000015467	sall4	80	42.582	ENSCJAG00000000591	SALL4	97	42.404	Callithrix_jacchus
ENSXCOG00000015467	sall4	100	42.730	ENSCAFG00000011738	-	100	42.352	Canis_familiaris
ENSXCOG00000015467	sall4	100	42.768	ENSCAFG00020021870	SALL4	100	42.352	Canis_lupus_dingo
ENSXCOG00000015467	sall4	100	40.283	ENSCHIG00000026270	SALL4	100	40.994	Capra_hircus
ENSXCOG00000015467	sall4	100	41.150	ENSTSYG00000007359	SALL4	100	44.737	Carlito_syrichta
ENSXCOG00000015467	sall4	98	41.869	ENSCAPG00000012135	SALL4	97	42.376	Cavia_aperea
ENSXCOG00000015467	sall4	100	41.962	ENSCCAG00000029512	-	100	60.784	Cebus_capucinus
ENSXCOG00000015467	sall4	100	41.667	ENSCATG00000030757	SALL4	75	67.308	Cercocebus_atys
ENSXCOG00000015467	sall4	100	41.516	ENSCLAG00000010479	SALL4	100	42.029	Chinchilla_lanigera
ENSXCOG00000015467	sall4	100	41.526	ENSCSAG00000015269	SALL4	100	41.373	Chlorocebus_sabaeus
ENSXCOG00000015467	sall4	99	48.181	ENSCPBG00000014995	SALL4	99	48.396	Chrysemys_picta_bellii
ENSXCOG00000015467	sall4	100	41.667	ENSCANG00000036463	SALL4	100	41.844	Colobus_angolensis_palliatus
ENSXCOG00000015467	sall4	100	39.747	ENSCGRG00001019569	Sall4	100	48.980	Cricetulus_griseus_chok1gshd
ENSXCOG00000015467	sall4	100	39.476	ENSCGRG00000000462	Sall4	100	79.012	Cricetulus_griseus_crigri
ENSXCOG00000015467	sall4	96	84.828	ENSCSEG00000014604	sall4	96	84.828	Cynoglossus_semilaevis
ENSXCOG00000015467	sall4	100	77.428	ENSCVAG00000010815	sall4	100	77.613	Cyprinodon_variegatus
ENSXCOG00000015467	sall4	99	57.220	ENSDARG00000044485	sall4	99	57.310	Danio_rerio
ENSXCOG00000015467	sall4	100	42.591	ENSDNOG00000040633	SALL4	100	42.277	Dasypus_novemcinctus
ENSXCOG00000015467	sall4	100	40.073	ENSDORG00000012841	Sall4	100	75.325	Dipodomys_ordii
ENSXCOG00000015467	sall4	69	65.385	ENSETEG00000012475	-	57	65.385	Echinops_telfairi
ENSXCOG00000015467	sall4	100	42.870	ENSECAG00000018533	SALL4	100	42.267	Equus_caballus
ENSXCOG00000015467	sall4	100	41.734	ENSEEUG00000003649	SALL4	99	40.656	Erinaceus_europaeus
ENSXCOG00000015467	sall4	100	58.584	ENSELUG00000005696	sall4	100	58.459	Esox_lucius
ENSXCOG00000015467	sall4	100	41.791	ENSFCAG00000002822	SALL4	76	67.308	Felis_catus
ENSXCOG00000015467	sall4	100	47.298	ENSFALG00000013149	SALL4	100	48.273	Ficedula_albicollis
ENSXCOG00000015467	sall4	100	39.840	ENSFDAG00000017812	SALL4	100	40.286	Fukomys_damarensis
ENSXCOG00000015467	sall4	100	77.880	ENSFHEG00000014187	sall4	100	77.880	Fundulus_heteroclitus
ENSXCOG00000015467	sall4	100	62.695	ENSGMOG00000003822	sall4	100	62.695	Gadus_morhua
ENSXCOG00000015467	sall4	100	47.772	ENSGALG00000041365	SALL4	100	48.230	Gallus_gallus
ENSXCOG00000015467	sall4	100	89.094	ENSGAFG00000019925	sall4	100	89.094	Gambusia_affinis
ENSXCOG00000015467	sall4	100	66.000	ENSGACG00000011124	sall4	100	66.000	Gasterosteus_aculeatus
ENSXCOG00000015467	sall4	99	47.795	ENSGAGG00000002297	SALL4	100	47.661	Gopherus_agassizii
ENSXCOG00000015467	sall4	100	41.748	ENSGGOG00000001832	SALL4	75	67.308	Gorilla_gorilla
ENSXCOG00000015467	sall4	100	70.211	ENSHBUG00000007327	sall4	100	70.211	Haplochromis_burtoni
ENSXCOG00000015467	sall4	98	41.290	ENSHGLG00000009043	SALL4	97	41.182	Heterocephalus_glaber_female
ENSXCOG00000015467	sall4	98	41.290	ENSHGLG00100002722	SALL4	97	41.182	Heterocephalus_glaber_male
ENSXCOG00000015467	sall4	100	68.015	ENSHCOG00000008519	sall4	100	67.798	Hippocampus_comes
ENSXCOG00000015467	sall4	99	57.776	ENSIPUG00000019170	sall4	99	58.590	Ictalurus_punctatus
ENSXCOG00000015467	sall4	62	44.737	ENSSTOG00000025002	SALL4	100	84.507	Ictidomys_tridecemlineatus
ENSXCOG00000015467	sall4	100	42.435	ENSJJAG00000020688	Sall4	93	85.915	Jaculus_jaculus
ENSXCOG00000015467	sall4	100	74.399	ENSKMAG00000002501	sall4	100	74.399	Kryptolebias_marmoratus
ENSXCOG00000015467	sall4	100	69.991	ENSLBEG00000019951	sall4	100	69.442	Labrus_bergylta
ENSXCOG00000015467	sall4	96	47.913	ENSLACG00000013898	SALL4	99	58.621	Latimeria_chalumnae
ENSXCOG00000015467	sall4	100	55.747	ENSLOCG00000002427	sall4	100	55.957	Lepisosteus_oculatus
ENSXCOG00000015467	sall4	100	42.947	ENSLAFG00000004309	SALL4	100	42.780	Loxodonta_africana
ENSXCOG00000015467	sall4	100	41.667	ENSMFAG00000027169	SALL4	100	41.881	Macaca_fascicularis
ENSXCOG00000015467	sall4	87	43.212	ENSMMUG00000003870	SALL4	100	46.259	Macaca_mulatta
ENSXCOG00000015467	sall4	87	43.212	ENSMNEG00000035995	SALL4	75	67.308	Macaca_nemestrina
ENSXCOG00000015467	sall4	100	41.755	ENSMLEG00000030467	SALL4	100	41.970	Mandrillus_leucophaeus
ENSXCOG00000015467	sall4	100	70.663	ENSMAMG00000005223	sall4	100	70.572	Mastacembelus_armatus
ENSXCOG00000015467	sall4	100	69.844	ENSMZEG00005023418	sall4	100	69.844	Maylandia_zebra
ENSXCOG00000015467	sall4	73	51.584	ENSMGAG00000009344	SALL4	100	52.345	Meleagris_gallopavo
ENSXCOG00000015467	sall4	100	39.666	ENSMAUG00000015814	Sall4	93	75.904	Mesocricetus_auratus
ENSXCOG00000015467	sall4	100	42.133	ENSMICG00000000027	SALL4	75	67.308	Microcebus_murinus
ENSXCOG00000015467	sall4	100	40.107	ENSMOCG00000018245	Sall4	100	83.562	Microtus_ochrogaster
ENSXCOG00000015467	sall4	100	71.336	ENSMMOG00000014929	sall4	100	71.429	Mola_mola
ENSXCOG00000015467	sall4	99	43.794	ENSMODG00000016387	SALL4	97	43.889	Monodelphis_domestica
ENSXCOG00000015467	sall4	100	73.003	ENSMALG00000018709	sall4	100	72.268	Monopterus_albus
ENSXCOG00000015467	sall4	100	40.493	MGP_CAROLIEiJ_G0024723	Sall4	100	86.111	Mus_caroli
ENSXCOG00000015467	sall4	100	40.177	ENSMUSG00000027547	Sall4	100	86.111	Mus_musculus
ENSXCOG00000015467	sall4	100	39.180	MGP_PahariEiJ_G0026164	Sall4	100	86.111	Mus_pahari
ENSXCOG00000015467	sall4	100	40.177	MGP_SPRETEiJ_G0025643	Sall4	100	86.111	Mus_spretus
ENSXCOG00000015467	sall4	100	41.904	ENSMPUG00000017543	SALL4	96	41.291	Mustela_putorius_furo
ENSXCOG00000015467	sall4	98	41.873	ENSMLUG00000007060	-	99	41.560	Myotis_lucifugus
ENSXCOG00000015467	sall4	100	39.741	ENSMLUG00000008405	-	100	39.576	Myotis_lucifugus
ENSXCOG00000015467	sall4	99	33.581	ENSMLUG00000028073	-	99	32.992	Myotis_lucifugus
ENSXCOG00000015467	sall4	100	41.219	ENSNGAG00000017833	Sall4	77	67.308	Nannospalax_galili
ENSXCOG00000015467	sall4	100	68.991	ENSNBRG00000001829	sall4	100	69.450	Neolamprologus_brichardi
ENSXCOG00000015467	sall4	100	41.474	ENSNLEG00000007013	SALL4	100	41.600	Nomascus_leucogenys
ENSXCOG00000015467	sall4	76	54.902	ENSMEUG00000005793	-	99	54.902	Notamacropus_eugenii
ENSXCOG00000015467	sall4	100	42.460	ENSOPRG00000011640	SALL4	100	42.446	Ochotona_princeps
ENSXCOG00000015467	sall4	100	70.119	ENSONIG00000016557	sall4	100	70.394	Oreochromis_niloticus
ENSXCOG00000015467	sall4	100	48.544	ENSOANG00000008667	SALL4	97	48.889	Ornithorhynchus_anatinus
ENSXCOG00000015467	sall4	98	41.258	ENSOCUG00000011797	SALL4	100	40.880	Oryctolagus_cuniculus
ENSXCOG00000015467	sall4	100	68.756	ENSORLG00000016130	sall4	100	69.032	Oryzias_latipes
ENSXCOG00000015467	sall4	100	68.553	ENSORLG00020007339	sall4	100	68.831	Oryzias_latipes_hni
ENSXCOG00000015467	sall4	100	68.629	ENSORLG00015002265	sall4	100	68.756	Oryzias_latipes_hsok
ENSXCOG00000015467	sall4	100	69.890	ENSOMEG00000017344	sall4	100	69.890	Oryzias_melastigma
ENSXCOG00000015467	sall4	97	42.173	ENSOGAG00000013799	SALL4	100	42.198	Otolemur_garnettii
ENSXCOG00000015467	sall4	100	40.967	ENSOARG00000014570	SALL4	100	41.150	Ovis_aries
ENSXCOG00000015467	sall4	100	41.704	ENSPPAG00000038064	SALL4	75	67.308	Pan_paniscus
ENSXCOG00000015467	sall4	100	41.879	ENSPPRG00000008677	SALL4	76	67.308	Panthera_pardus
ENSXCOG00000015467	sall4	100	41.652	ENSPTRG00000013631	SALL4	75	67.308	Pan_troglodytes
ENSXCOG00000015467	sall4	87	43.212	ENSPANG00000021792	SALL4	75	67.308	Papio_anubis
ENSXCOG00000015467	sall4	100	56.392	ENSPKIG00000007074	sall4	100	56.703	Paramormyrops_kingsleyae
ENSXCOG00000015467	sall4	99	47.826	ENSPSIG00000009066	SALL4	100	47.926	Pelodiscus_sinensis
ENSXCOG00000015467	sall4	100	58.364	ENSPMGG00000022551	sall4	100	58.840	Periophthalmus_magnuspinnatus
ENSXCOG00000015467	sall4	100	40.090	ENSPEMG00000022706	Sall4	100	86.111	Peromyscus_maniculatus_bairdii
ENSXCOG00000015467	sall4	100	44.685	ENSPCIG00000022838	SALL4	97	45.248	Phascolarctos_cinereus
ENSXCOG00000015467	sall4	100	86.004	ENSPFOG00000001442	sall4	100	86.004	Poecilia_formosa
ENSXCOG00000015467	sall4	100	85.912	ENSPLAG00000008760	sall4	100	85.912	Poecilia_latipinna
ENSXCOG00000015467	sall4	100	87.431	ENSPMEG00000008497	sall4	100	87.431	Poecilia_mexicana
ENSXCOG00000015467	sall4	100	87.338	ENSPREG00000021140	sall4	100	87.338	Poecilia_reticulata
ENSXCOG00000015467	sall4	100	41.667	ENSPPYG00000011138	SALL4	100	41.652	Pongo_abelii
ENSXCOG00000015467	sall4	87	69.565	ENSPCAG00000004726	SALL4	93	69.565	Procavia_capensis
ENSXCOG00000015467	sall4	100	42.105	ENSPCOG00000016321	SALL4	75	67.308	Propithecus_coquereli
ENSXCOG00000015467	sall4	93	41.165	ENSPVAG00000002075	SALL4	94	40.779	Pteropus_vampyrus
ENSXCOG00000015467	sall4	100	69.908	ENSPNYG00000021738	sall4	100	69.908	Pundamilia_nyererei
ENSXCOG00000015467	sall4	99	59.927	ENSPNAG00000020929	sall4	99	60.672	Pygocentrus_nattereri
ENSXCOG00000015467	sall4	100	40.567	ENSRNOG00000050035	Sall4	100	40.653	Rattus_norvegicus
ENSXCOG00000015467	sall4	100	41.667	ENSRBIG00000039876	SALL4	100	41.970	Rhinopithecus_bieti
ENSXCOG00000015467	sall4	100	41.755	ENSRROG00000036585	SALL4	100	41.970	Rhinopithecus_roxellana
ENSXCOG00000015467	sall4	100	42.250	ENSSBOG00000030011	SALL4	75	67.308	Saimiri_boliviensis_boliviensis
ENSXCOG00000015467	sall4	96	65.385	ENSSHAG00000018013	SALL4	91	65.385	Sarcophilus_harrisii
ENSXCOG00000015467	sall4	100	56.975	ENSSFOG00015021075	sall4	100	57.065	Scleropages_formosus
ENSXCOG00000015467	sall4	100	71.901	ENSSMAG00000019218	sall4	99	72.176	Scophthalmus_maximus
ENSXCOG00000015467	sall4	100	73.602	ENSSDUG00000004657	sall4	100	72.961	Seriola_dumerili
ENSXCOG00000015467	sall4	100	72.319	ENSSLDG00000004973	sall4	100	72.594	Seriola_lalandi_dorsalis
ENSXCOG00000015467	sall4	100	72.744	ENSSPAG00000001978	sall4	100	72.007	Stegastes_partitus
ENSXCOG00000015467	sall4	100	42.449	ENSSSCG00000007479	SALL4	100	42.091	Sus_scrofa
ENSXCOG00000015467	sall4	100	68.165	ENSTRUG00000007410	sall4	100	67.339	Takifugu_rubripes
ENSXCOG00000015467	sall4	100	65.993	ENSTNIG00000012460	sall4	100	66.360	Tetraodon_nigroviridis
ENSXCOG00000015467	sall4	97	41.698	ENSTTRG00000007753	SALL4	99	41.604	Tursiops_truncatus
ENSXCOG00000015467	sall4	100	42.373	ENSUAMG00000010113	SALL4	100	41.941	Ursus_americanus
ENSXCOG00000015467	sall4	96	42.708	ENSUMAG00000024274	SALL4	97	42.066	Ursus_maritimus
ENSXCOG00000015467	sall4	100	45.545	ENSXETG00000012326	sall4	100	45.455	Xenopus_tropicalis
ENSXCOG00000015467	sall4	100	98.071	ENSXMAG00000012692	sall4	100	98.071	Xiphophorus_maculatus