EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000015488 (Gene tree)
Gene ID: -
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3354 bases
Position: chrKQ557216.1:4890752-4894105
Accession: ZDB-GENE-030131-5546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000020667	SRP72	PF08492.12	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000020918	-	666	-	ENSXCOP00000020667	221 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000015488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015488's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000015488	srp72	91	76.119	ENSANAG00000020836	-	100	75.676	Aotus_nancymaae
ENSXCOG00000015488	srp72	91	73.529	ENSCJAG00000017998	SRP72	100	73.333	Callithrix_jacchus
ENSXCOG00000015488	srp72	91	73.529	ENSTSYG00000010571	-	100	73.333	Carlito_syrichta
ENSXCOG00000015488	srp72	91	74.020	ENSCAPG00000016668	SRP72	100	73.778	Cavia_aperea
ENSXCOG00000015488	srp72	91	74.020	ENSCCAG00000030683	-	100	73.778	Cebus_capucinus
ENSXCOG00000015488	srp72	90	60.804	ENSFDAG00000012897	-	97	60.804	Fukomys_damarensis
ENSXCOG00000015488	srp72	91	72.549	ENSGGOG00000013234	-	100	72.444	Gorilla_gorilla
ENSXCOG00000015488	srp72	96	65.278	ENSHGLG00000010633	-	99	65.116	Heterocephalus_glaber_female
ENSXCOG00000015488	srp72	93	46.383	ENSHGLG00000003496	-	67	46.667	Heterocephalus_glaber_female
ENSXCOG00000015488	srp72	59	57.576	ENSHGLG00100006071	-	70	57.576	Heterocephalus_glaber_male
ENSXCOG00000015488	srp72	100	66.926	ENSMGAG00000008567	SRP72	55	66.926	Meleagris_gallopavo
ENSXCOG00000015488	srp72	91	73.399	ENSMICG00000008507	-	100	73.214	Microcebus_murinus
ENSXCOG00000015488	srp72	91	73.039	ENSNLEG00000008806	-	100	72.444	Nomascus_leucogenys
ENSXCOG00000015488	srp72	91	73.039	ENSPPAG00000042265	SRP72	100	72.889	Pan_paniscus
ENSXCOG00000015488	srp72	79	66.667	ENSPPAG00000032490	-	86	64.943	Pan_paniscus
ENSXCOG00000015488	srp72	91	73.039	ENSPTRG00000048466	-	100	72.889	Pan_troglodytes
ENSXCOG00000015488	srp72	82	64.088	ENSPTRG00000043609	-	95	62.431	Pan_troglodytes
ENSXCOG00000015488	srp72	90	59.804	ENSPMAG00000008885	-	91	59.135	Petromyzon_marinus
ENSXCOG00000015488	srp72	93	55.602	ENSPPYG00000009152	-	64	55.061	Pongo_abelii
ENSXCOG00000015488	srp72	100	74.107	ENSRNOG00000002100	LOC108348180	100	74.107	Rattus_norvegicus
ENSXCOG00000015488	srp72	64	57.803	ENSRROG00000042114	-	67	58.333	Rhinopithecus_roxellana
ENSXCOG00000015488	srp72	91	64.831	ENSUAMG00000001701	SRP72	68	65.370	Ursus_americanus