EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000015733 (Gene tree)
Gene ID: -
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 9929 bases
Position: chrKQ557220.1:25361078-25371006
Accession: ZDB-GENE-060810-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000021029	TRM	PF02005.16	1.1e-139	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000021287	-	1920	-	ENSXCOP00000021029	639 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000015733's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015733's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000015733	trmt1	88	68.935	ENSG00000104907	TRMT1	100	76.042	Homo_sapiens
ENSXCOG00000015733	trmt1	98	63.027	ENSAMEG00000012598	TRMT1	94	62.656	Ailuropoda_melanoleuca
ENSXCOG00000015733	trmt1	95	78.454	ENSACIG00000018680	trmt1	95	78.454	Amphilophus_citrinellus
ENSXCOG00000015733	trmt1	100	81.269	ENSAOCG00000006781	trmt1	100	81.269	Amphiprion_ocellaris
ENSXCOG00000015733	trmt1	100	81.420	ENSAPEG00000007712	trmt1	100	81.420	Amphiprion_percula
ENSXCOG00000015733	trmt1	100	80.597	ENSATEG00000001872	trmt1	100	80.597	Anabas_testudineus
ENSXCOG00000015733	trmt1	88	68.412	ENSACAG00000003825	TRMT1	93	68.237	Anolis_carolinensis
ENSXCOG00000015733	trmt1	88	67.250	ENSANAG00000023016	TRMT1	92	66.725	Aotus_nancymaae
ENSXCOG00000015733	trmt1	94	83.361	ENSACLG00000010073	trmt1	96	84.211	Astatotilapia_calliptera
ENSXCOG00000015733	trmt1	93	77.815	ENSAMXG00000012026	trmt1	91	77.649	Astyanax_mexicanus
ENSXCOG00000015733	trmt1	91	66.722	ENSBTAG00000019325	TRMT1	85	66.555	Bos_taurus
ENSXCOG00000015733	trmt1	82	40.223	WBGene00006613	trm-1	96	40.037	Caenorhabditis_elegans
ENSXCOG00000015733	trmt1	88	66.087	ENSCJAG00000004566	TRMT1	88	65.565	Callithrix_jacchus
ENSXCOG00000015733	trmt1	90	67.632	ENSCAFG00000017070	TRMT1	91	67.235	Canis_familiaris
ENSXCOG00000015733	trmt1	90	67.406	ENSCAFG00020005397	TRMT1	89	66.952	Canis_lupus_dingo
ENSXCOG00000015733	trmt1	89	67.692	ENSCHIG00000013569	TRMT1	88	67.521	Capra_hircus
ENSXCOG00000015733	trmt1	88	66.202	ENSTSYG00000003207	TRMT1	87	65.849	Carlito_syrichta
ENSXCOG00000015733	trmt1	82	63.842	ENSCAPG00000003355	TRMT1	94	63.842	Cavia_aperea
ENSXCOG00000015733	trmt1	88	67.190	ENSCPOG00000011754	TRMT1	87	67.190	Cavia_porcellus
ENSXCOG00000015733	trmt1	88	65.674	ENSCCAG00000022263	TRMT1	92	65.149	Cebus_capucinus
ENSXCOG00000015733	trmt1	88	68.531	ENSCATG00000039850	TRMT1	86	68.531	Cercocebus_atys
ENSXCOG00000015733	trmt1	78	58.658	ENSCATG00000038220	-	90	58.442	Cercocebus_atys
ENSXCOG00000015733	trmt1	92	66.275	ENSCLAG00000015295	TRMT1	92	63.361	Chinchilla_lanigera
ENSXCOG00000015733	trmt1	73	71.158	ENSCSAG00000006500	TRMT1	89	71.158	Chlorocebus_sabaeus
ENSXCOG00000015733	trmt1	88	71.352	ENSCPBG00000023866	TRMT1	85	71.352	Chrysemys_picta_bellii
ENSXCOG00000015733	trmt1	85	48.545	ENSCING00000002884	-	98	48.545	Ciona_intestinalis
ENSXCOG00000015733	trmt1	84	50.926	ENSCSAVG00000010927	-	100	49.358	Ciona_savignyi
ENSXCOG00000015733	trmt1	88	54.101	ENSCANG00000040631	TRMT1	86	54.101	Colobus_angolensis_palliatus
ENSXCOG00000015733	trmt1	85	54.167	ENSCANG00000031650	-	86	53.986	Colobus_angolensis_palliatus
ENSXCOG00000015733	trmt1	87	67.606	ENSCGRG00001022594	Trmt1	87	67.838	Cricetulus_griseus_chok1gshd
ENSXCOG00000015733	trmt1	87	67.606	ENSCGRG00000017732	Trmt1	86	67.838	Cricetulus_griseus_crigri
ENSXCOG00000015733	trmt1	94	83.833	ENSCSEG00000001643	trmt1	90	83.667	Cynoglossus_semilaevis
ENSXCOG00000015733	trmt1	100	84.954	ENSCVAG00000011886	trmt1	100	84.954	Cyprinodon_variegatus
ENSXCOG00000015733	trmt1	93	77.924	ENSDARG00000010978	trmt1	90	76.911	Danio_rerio
ENSXCOG00000015733	trmt1	80	46.768	ENSDNOG00000048240	-	89	46.008	Dasypus_novemcinctus
ENSXCOG00000015733	trmt1	88	66.200	ENSDORG00000014298	Trmt1	86	66.200	Dipodomys_ordii
ENSXCOG00000015733	trmt1	86	46.441	FBgn0032430	CG6388	94	46.085	Drosophila_melanogaster
ENSXCOG00000015733	trmt1	79	51.575	ENSEBUG00000003449	trmt1	75	51.758	Eptatretus_burgeri
ENSXCOG00000015733	trmt1	88	68.056	ENSEASG00005004050	TRMT1	90	67.652	Equus_asinus_asinus
ENSXCOG00000015733	trmt1	88	68.056	ENSECAG00000016149	TRMT1	90	67.652	Equus_caballus
ENSXCOG00000015733	trmt1	61	58.228	ENSEEUG00000014102	-	100	58.228	Erinaceus_europaeus
ENSXCOG00000015733	trmt1	94	73.206	ENSELUG00000021659	trmt1	94	73.046	Esox_lucius
ENSXCOG00000015733	trmt1	95	64.506	ENSFCAG00000000483	TRMT1	93	64.506	Felis_catus
ENSXCOG00000015733	trmt1	94	64.355	ENSFDAG00000007386	TRMT1	93	64.194	Fukomys_damarensis
ENSXCOG00000015733	trmt1	90	85.786	ENSFHEG00000012865	trmt1	100	85.786	Fundulus_heteroclitus
ENSXCOG00000015733	trmt1	89	73.898	ENSGMOG00000006564	trmt1	99	74.074	Gadus_morhua
ENSXCOG00000015733	trmt1	100	96.557	ENSGAFG00000011862	trmt1	100	96.557	Gambusia_affinis
ENSXCOG00000015733	trmt1	89	82.662	ENSGACG00000000227	trmt1	93	82.662	Gasterosteus_aculeatus
ENSXCOG00000015733	trmt1	88	71.631	ENSGAGG00000016432	TRMT1	84	71.454	Gopherus_agassizii
ENSXCOG00000015733	trmt1	92	66.722	ENSGGOG00000014007	TRMT1	90	66.555	Gorilla_gorilla
ENSXCOG00000015733	trmt1	86	77.596	ENSHBUG00000008821	trmt1	92	77.231	Haplochromis_burtoni
ENSXCOG00000015733	trmt1	92	65.719	ENSHGLG00000015972	TRMT1	90	65.494	Heterocephalus_glaber_female
ENSXCOG00000015733	trmt1	92	61.037	ENSHGLG00100018112	TRMT1	90	60.804	Heterocephalus_glaber_male
ENSXCOG00000015733	trmt1	94	78.843	ENSHCOG00000009447	trmt1	94	78.843	Hippocampus_comes
ENSXCOG00000015733	trmt1	92	75.124	ENSIPUG00000002899	trmt1	87	74.959	Ictalurus_punctatus
ENSXCOG00000015733	trmt1	88	67.832	ENSSTOG00000012531	TRMT1	87	67.832	Ictidomys_tridecemlineatus
ENSXCOG00000015733	trmt1	93	65.289	ENSJJAG00000017154	Trmt1	92	64.379	Jaculus_jaculus
ENSXCOG00000015733	trmt1	99	83.105	ENSKMAG00000011809	trmt1	98	86.278	Kryptolebias_marmoratus
ENSXCOG00000015733	trmt1	100	77.943	ENSLBEG00000012703	trmt1	100	78.092	Labrus_bergylta
ENSXCOG00000015733	trmt1	89	62.827	ENSLACG00000014585	TRMT1	94	62.478	Latimeria_chalumnae
ENSXCOG00000015733	trmt1	89	71.529	ENSLOCG00000006479	trmt1	99	71.353	Lepisosteus_oculatus
ENSXCOG00000015733	trmt1	88	69.056	ENSLAFG00000014072	TRMT1	88	68.522	Loxodonta_africana
ENSXCOG00000015733	trmt1	88	68.531	ENSMFAG00000033143	TRMT1	86	68.531	Macaca_fascicularis
ENSXCOG00000015733	trmt1	88	64.035	ENSMMUG00000001167	TRMT1	87	64.035	Macaca_mulatta
ENSXCOG00000015733	trmt1	88	68.531	ENSMNEG00000037867	TRMT1	86	68.531	Macaca_nemestrina
ENSXCOG00000015733	trmt1	88	68.357	ENSMLEG00000016142	TRMT1	87	68.357	Mandrillus_leucophaeus
ENSXCOG00000015733	trmt1	99	81.024	ENSMAMG00000004357	trmt1	100	80.723	Mastacembelus_armatus
ENSXCOG00000015733	trmt1	100	79.514	ENSMZEG00005014510	trmt1	100	79.211	Maylandia_zebra
ENSXCOG00000015733	trmt1	88	66.841	ENSMAUG00000011134	Trmt1	87	66.667	Mesocricetus_auratus
ENSXCOG00000015733	trmt1	88	68.881	ENSMICG00000000793	TRMT1	86	68.357	Microcebus_murinus
ENSXCOG00000015733	trmt1	88	67.426	ENSMOCG00000015895	Trmt1	86	67.426	Microtus_ochrogaster
ENSXCOG00000015733	trmt1	95	82.459	ENSMMOG00000011097	trmt1	99	82.459	Mola_mola
ENSXCOG00000015733	trmt1	92	67.905	ENSMODG00000011619	TRMT1	96	67.337	Monodelphis_domestica
ENSXCOG00000015733	trmt1	87	69.069	MGP_CAROLIEiJ_G0031304	Trmt1	86	68.607	Mus_caroli
ENSXCOG00000015733	trmt1	87	69.190	ENSMUSG00000001909	Trmt1	86	68.783	Mus_musculus
ENSXCOG00000015733	trmt1	87	68.728	MGP_SPRETEiJ_G0032422	Trmt1	86	68.607	Mus_spretus
ENSXCOG00000015733	trmt1	89	68.889	ENSMPUG00000004210	TRMT1	83	68.322	Mustela_putorius_furo
ENSXCOG00000015733	trmt1	88	68.696	ENSMLUG00000012809	TRMT1	86	68.750	Myotis_lucifugus
ENSXCOG00000015733	trmt1	88	67.530	ENSNGAG00000022486	Trmt1	87	67.185	Nannospalax_galili
ENSXCOG00000015733	trmt1	78	89.706	ENSNBRG00000024376	trmt1	87	89.706	Neolamprologus_brichardi
ENSXCOG00000015733	trmt1	73	63.636	ENSNLEG00000013019	-	87	63.323	Nomascus_leucogenys
ENSXCOG00000015733	trmt1	88	68.486	ENSMEUG00000013756	TRMT1	97	68.486	Notamacropus_eugenii
ENSXCOG00000015733	trmt1	72	76.000	ENSOPRG00000009471	-	71	76.000	Ochotona_princeps
ENSXCOG00000015733	trmt1	88	68.126	ENSODEG00000010323	TRMT1	87	68.126	Octodon_degus
ENSXCOG00000015733	trmt1	100	83.156	ENSONIG00000000400	trmt1	96	87.059	Oreochromis_niloticus
ENSXCOG00000015733	trmt1	73	71.639	ENSOCUG00000021934	TRMT1	90	71.639	Oryctolagus_cuniculus
ENSXCOG00000015733	trmt1	94	78.723	ENSORLG00000020074	trmt1	97	78.723	Oryzias_latipes
ENSXCOG00000015733	trmt1	95	82.068	ENSORLG00020007561	trmt1	96	82.810	Oryzias_latipes_hni
ENSXCOG00000015733	trmt1	95	81.583	ENSORLG00015006547	trmt1	95	81.583	Oryzias_latipes_hsok
ENSXCOG00000015733	trmt1	97	81.180	ENSOMEG00000019343	trmt1	96	81.180	Oryzias_melastigma
ENSXCOG00000015733	trmt1	88	68.237	ENSOGAG00000025576	TRMT1	90	68.237	Otolemur_garnettii
ENSXCOG00000015733	trmt1	89	55.196	ENSOARG00000009397	TRMT1	82	55.196	Ovis_aries
ENSXCOG00000015733	trmt1	95	58.414	ENSPPRG00000012117	TRMT1	94	57.955	Panthera_pardus
ENSXCOG00000015733	trmt1	72	64.371	ENSPTIG00000008833	TRMT1	89	63.253	Panthera_tigris_altaica
ENSXCOG00000015733	trmt1	88	68.935	ENSPTRG00000010557	TRMT1	87	68.761	Pan_troglodytes
ENSXCOG00000015733	trmt1	86	51.228	ENSPTRG00000050421	-	89	50.704	Pan_troglodytes
ENSXCOG00000015733	trmt1	68	59.368	ENSPANG00000034058	-	78	59.142	Papio_anubis
ENSXCOG00000015733	trmt1	88	68.531	ENSPANG00000009247	TRMT1	87	68.531	Papio_anubis
ENSXCOG00000015733	trmt1	96	74.677	ENSPKIG00000005309	trmt1	93	74.677	Paramormyrops_kingsleyae
ENSXCOG00000015733	trmt1	95	57.190	ENSPSIG00000008762	TRMT1	86	57.190	Pelodiscus_sinensis
ENSXCOG00000015733	trmt1	94	81.333	ENSPMGG00000019764	trmt1	94	81.575	Periophthalmus_magnuspinnatus
ENSXCOG00000015733	trmt1	93	65.410	ENSPEMG00000016247	Trmt1	91	65.410	Peromyscus_maniculatus_bairdii
ENSXCOG00000015733	trmt1	88	63.410	ENSPMAG00000004329	trmt1	90	63.410	Petromyzon_marinus
ENSXCOG00000015733	trmt1	92	67.399	ENSPCIG00000019273	TRMT1	92	66.834	Phascolarctos_cinereus
ENSXCOG00000015733	trmt1	100	95.931	ENSPFOG00000008527	trmt1	100	95.931	Poecilia_formosa
ENSXCOG00000015733	trmt1	100	94.366	ENSPLAG00000018788	trmt1	100	95.719	Poecilia_latipinna
ENSXCOG00000015733	trmt1	100	95.775	ENSPMEG00000013120	trmt1	100	95.775	Poecilia_mexicana
ENSXCOG00000015733	trmt1	99	94.313	ENSPREG00000000211	trmt1	96	94.313	Poecilia_reticulata
ENSXCOG00000015733	trmt1	92	66.388	ENSPPYG00000009622	TRMT1	90	66.221	Pongo_abelii
ENSXCOG00000015733	trmt1	88	64.098	ENSPCAG00000003698	TRMT1	87	64.098	Procavia_capensis
ENSXCOG00000015733	trmt1	92	66.164	ENSPCOG00000008653	TRMT1	90	65.997	Propithecus_coquereli
ENSXCOG00000015733	trmt1	88	68.586	ENSPVAG00000015076	TRMT1	87	68.293	Pteropus_vampyrus
ENSXCOG00000015733	trmt1	92	83.192	ENSPNYG00000013960	trmt1	96	82.852	Pundamilia_nyererei
ENSXCOG00000015733	trmt1	94	68.882	ENSPNAG00000024859	trmt1	99	67.937	Pygocentrus_nattereri
ENSXCOG00000015733	trmt1	87	67.725	ENSRNOG00000002914	Trmt1	89	67.606	Rattus_norvegicus
ENSXCOG00000015733	trmt1	85	52.330	ENSRBIG00000037505	-	87	52.518	Rhinopithecus_bieti
ENSXCOG00000015733	trmt1	88	68.651	ENSRBIG00000038324	TRMT1	86	68.651	Rhinopithecus_bieti
ENSXCOG00000015733	trmt1	85	51.712	ENSRROG00000031847	-	86	51.978	Rhinopithecus_roxellana
ENSXCOG00000015733	trmt1	88	68.651	ENSRROG00000028599	TRMT1	86	68.651	Rhinopithecus_roxellana
ENSXCOG00000015733	trmt1	79	40.226	YDR120C	-	92	39.736	Saccharomyces_cerevisiae
ENSXCOG00000015733	trmt1	88	66.084	ENSSBOG00000028861	TRMT1	92	65.559	Saimiri_boliviensis_boliviensis
ENSXCOG00000015733	trmt1	88	70.299	ENSSHAG00000014381	TRMT1	96	67.446	Sarcophilus_harrisii
ENSXCOG00000015733	trmt1	90	79.861	ENSSFOG00015004139	trmt1	85	79.723	Scleropages_formosus
ENSXCOG00000015733	trmt1	100	79.460	ENSSMAG00000021136	trmt1	100	79.310	Scophthalmus_maximus
ENSXCOG00000015733	trmt1	100	81.493	ENSSDUG00000012740	trmt1	100	81.642	Seriola_dumerili
ENSXCOG00000015733	trmt1	100	81.045	ENSSLDG00000005971	trmt1	100	81.194	Seriola_lalandi_dorsalis
ENSXCOG00000015733	trmt1	79	66.408	ENSSARG00000005138	TRMT1	91	66.214	Sorex_araneus
ENSXCOG00000015733	trmt1	89	54.059	ENSSPUG00000001084	TRMT1	91	54.017	Sphenodon_punctatus
ENSXCOG00000015733	trmt1	100	79.909	ENSSPAG00000007153	trmt1	99	85.473	Stegastes_partitus
ENSXCOG00000015733	trmt1	88	68.237	ENSSSCG00000013744	TRMT1	91	67.126	Sus_scrofa
ENSXCOG00000015733	trmt1	96	74.804	ENSTRUG00000010700	trmt1	95	74.961	Takifugu_rubripes
ENSXCOG00000015733	trmt1	89	85.589	ENSTNIG00000018808	trmt1	99	85.589	Tetraodon_nigroviridis
ENSXCOG00000015733	trmt1	88	65.734	ENSTTRG00000006379	TRMT1	87	65.445	Tursiops_truncatus
ENSXCOG00000015733	trmt1	88	68.403	ENSUAMG00000022911	TRMT1	94	64.940	Ursus_americanus
ENSXCOG00000015733	trmt1	88	68.229	ENSUMAG00000006027	TRMT1	90	67.826	Ursus_maritimus
ENSXCOG00000015733	trmt1	89	68.034	ENSVVUG00000024177	TRMT1	87	67.637	Vulpes_vulpes
ENSXCOG00000015733	trmt1	71	69.783	ENSXETG00000033863	TRMT1	92	69.565	Xenopus_tropicalis
ENSXCOG00000015733	trmt1	89	99.475	ENSXMAG00000013823	trmt1	99	99.475	Xiphophorus_maculatus