EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000015746 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 4660 bases
Position: chrKQ557212.1:4727017-4731676
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000021042	Ribosomal_S17e	PF00833.18	7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000021300	-	231	-	ENSXCOP00000021042	76 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000015746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000015746	-	86	65.672	ENSXCOG00000000564	rps17	51	65.672

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000015746	-	86	65.672	ENSAPOG00000007940	rps17	51	65.672	Acanthochromis_polyacanthus
ENSXCOG00000015746	-	86	77.612	ENSAPOG00000005733	-	50	77.612	Acanthochromis_polyacanthus
ENSXCOG00000015746	-	80	77.778	ENSAPLG00000003843	-	52	77.778	Anas_platyrhynchos
ENSXCOG00000015746	-	93	60.563	ENSANAG00000022977	-	51	60.563	Aotus_nancymaae
ENSXCOG00000015746	-	80	73.016	ENSCAFG00020003179	-	51	73.016	Canis_lupus_dingo
ENSXCOG00000015746	-	79	79.032	ENSCSAG00000017280	-	79	79.032	Chlorocebus_sabaeus
ENSXCOG00000015746	-	80	73.016	ENSCGRG00001006312	-	50	73.016	Cricetulus_griseus_chok1gshd
ENSXCOG00000015746	-	84	71.212	ENSCGRG00001021718	-	54	71.212	Cricetulus_griseus_chok1gshd
ENSXCOG00000015746	-	80	73.016	ENSCGRG00000012754	-	50	73.016	Cricetulus_griseus_crigri
ENSXCOG00000015746	-	84	71.212	ENSCGRG00000004751	-	54	71.212	Cricetulus_griseus_crigri
ENSXCOG00000015746	-	80	82.540	ENSCSEG00000021774	RPS17	52	82.540	Cynoglossus_semilaevis
ENSXCOG00000015746	-	86	70.149	ENSCSEG00000008659	-	51	70.149	Cynoglossus_semilaevis
ENSXCOG00000015746	-	86	68.657	ENSCVAG00000004936	rps17	50	68.657	Cyprinodon_variegatus
ENSXCOG00000015746	-	86	73.134	ENSDORG00000026945	-	81	73.134	Dipodomys_ordii
ENSXCOG00000015746	-	86	79.104	ENSFHEG00000018360	-	50	79.104	Fundulus_heteroclitus
ENSXCOG00000015746	-	86	64.179	ENSFHEG00000014813	rps17	50	64.179	Fundulus_heteroclitus
ENSXCOG00000015746	-	86	73.134	ENSGMOG00000008493	rps17	50	73.134	Gadus_morhua
ENSXCOG00000015746	-	86	67.164	ENSGAFG00000003021	rps17	52	67.164	Gambusia_affinis
ENSXCOG00000015746	-	86	76.119	ENSGACG00000007990	RPS17	50	76.119	Gasterosteus_aculeatus
ENSXCOG00000015746	-	72	80.000	ENSGGOG00000041540	-	50	80.000	Gorilla_gorilla
ENSXCOG00000015746	-	86	69.231	ENSGGOG00000006258	-	52	69.231	Gorilla_gorilla
ENSXCOG00000015746	-	99	58.427	ENSGGOG00000039339	-	88	58.427	Gorilla_gorilla
ENSXCOG00000015746	-	80	71.429	ENSHBUG00000019784	-	82	71.429	Haplochromis_burtoni
ENSXCOG00000015746	-	78	62.295	ENSHGLG00000011173	-	55	62.295	Heterocephalus_glaber_female
ENSXCOG00000015746	-	78	62.295	ENSHGLG00100004963	-	55	62.295	Heterocephalus_glaber_male
ENSXCOG00000015746	-	86	62.687	ENSHCOG00000018369	rps17	50	62.687	Hippocampus_comes
ENSXCOG00000015746	-	76	75.862	ENSJJAG00000012931	-	50	75.862	Jaculus_jaculus
ENSXCOG00000015746	-	89	65.714	ENSJJAG00000023304	-	56	65.714	Jaculus_jaculus
ENSXCOG00000015746	-	86	73.134	ENSMGAG00000001359	-	66	73.134	Meleagris_gallopavo
ENSXCOG00000015746	-	86	68.657	ENSMICG00000002072	-	54	68.657	Microcebus_murinus
ENSXCOG00000015746	-	86	76.119	ENSMMOG00000018386	RPS17	52	76.119	Mola_mola
ENSXCOG00000015746	-	86	73.134	ENSMLUG00000022830	-	81	73.134	Myotis_lucifugus
ENSXCOG00000015746	-	99	58.427	ENSNLEG00000031165	-	67	58.427	Nomascus_leucogenys
ENSXCOG00000015746	-	76	77.586	ENSODEG00000007312	-	50	77.586	Octodon_degus
ENSXCOG00000015746	-	86	67.164	ENSORLG00000001513	-	51	67.164	Oryzias_latipes
ENSXCOG00000015746	-	86	65.672	ENSOGAG00000028462	-	50	65.672	Otolemur_garnettii
ENSXCOG00000015746	-	80	77.778	ENSPPAG00000038862	-	53	77.778	Pan_paniscus
ENSXCOG00000015746	-	88	65.217	ENSPTRG00000044384	-	51	65.217	Pan_troglodytes
ENSXCOG00000015746	-	80	77.778	ENSPTRG00000050839	-	53	77.778	Pan_troglodytes
ENSXCOG00000015746	-	86	68.657	ENSPMGG00000021185	rps17	52	68.657	Periophthalmus_magnuspinnatus
ENSXCOG00000015746	-	80	84.127	ENSPFOG00000014035	-	82	84.127	Poecilia_formosa
ENSXCOG00000015746	-	86	67.164	ENSPLAG00000008908	rps17	52	67.164	Poecilia_latipinna
ENSXCOG00000015746	-	86	67.164	ENSPMEG00000007981	rps17	52	67.164	Poecilia_mexicana
ENSXCOG00000015746	-	86	67.164	ENSPREG00000006044	rps17	52	67.164	Poecilia_reticulata
ENSXCOG00000015746	-	82	71.875	ENSPCOG00000028604	-	54	71.875	Propithecus_coquereli
ENSXCOG00000015746	-	86	74.627	ENSPNAG00000017372	RPS17	50	74.627	Pygocentrus_nattereri
ENSXCOG00000015746	-	86	64.179	ENSRNOG00000030162	AC114393.1	50	64.179	Rattus_norvegicus
ENSXCOG00000015746	-	80	77.778	ENSSHAG00000014004	-	56	77.778	Sarcophilus_harrisii
ENSXCOG00000015746	-	80	77.778	ENSTGUG00000004581	-	53	77.778	Taeniopygia_guttata
ENSXCOG00000015746	-	83	64.615	ENSTRUG00000022874	-	51	64.615	Takifugu_rubripes
ENSXCOG00000015746	-	86	74.627	ENSTRUG00000014186	RPS17	50	74.627	Takifugu_rubripes
ENSXCOG00000015746	-	86	74.627	ENSTNIG00000002680	RPS17	50	74.627	Tetraodon_nigroviridis
ENSXCOG00000015746	-	80	77.778	ENSUMAG00000009934	-	81	77.778	Ursus_maritimus
ENSXCOG00000015746	-	86	65.672	ENSXMAG00000023737	rps17	51	65.672	Xiphophorus_maculatus