EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000015871 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: U1C|chunp6909|zgc:109792
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 6792 bases
Position: chrKQ557213.1:23186194-23192985
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000021211	zf-U1	PF06220.12	7.3e-20	1	1
ENSXCOP00000021214	zf-U1	PF06220.12	1.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000021474	-	726	-	ENSXCOP00000021214	241 (aa)	-	-
ENSXCOT00000021471	-	414	-	ENSXCOP00000021211	137 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000015871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000015871	-	100	97.122	ENSACIG00000010867	snrpc	100	97.122	Amphilophus_citrinellus
ENSXCOG00000015871	-	100	64.744	ENSANAG00000021026	-	90	57.692	Aotus_nancymaae
ENSXCOG00000015871	-	100	63.522	ENSANAG00000019157	-	50	64.634	Aotus_nancymaae
ENSXCOG00000015871	-	99	63.636	ENSCLAG00000010242	-	60	61.856	Chinchilla_lanigera
ENSXCOG00000015871	-	100	93.151	ENSCSEG00000016845	snrpc	98	93.151	Cynoglossus_semilaevis
ENSXCOG00000015871	-	100	72.222	ENSCVAG00000014297	snrpc	98	94.444	Cyprinodon_variegatus
ENSXCOG00000015871	-	98	60.256	ENSETEG00000011265	-	54	56.977	Echinops_telfairi
ENSXCOG00000015871	-	74	95.238	ENSFHEG00000016667	snrpc	94	95.238	Fundulus_heteroclitus
ENSXCOG00000015871	-	100	93.056	ENSGMOG00000000090	snrpc	99	93.056	Gadus_morhua
ENSXCOG00000015871	-	100	72.917	ENSGAFG00000016115	snrpc	98	95.139	Gambusia_affinis
ENSXCOG00000015871	-	100	76.389	ENSHCOG00000001596	snrpc	98	74.306	Hippocampus_comes
ENSXCOG00000015871	-	100	78.621	ENSKMAG00000016356	snrpc	98	93.793	Kryptolebias_marmoratus
ENSXCOG00000015871	-	99	55.405	ENSMLEG00000039724	-	61	44.737	Mandrillus_leucophaeus
ENSXCOG00000015871	-	100	72.727	ENSMMOG00000013149	snrpc	100	95.105	Mola_mola
ENSXCOG00000015871	-	100	93.750	ENSMALG00000001197	snrpc	98	93.750	Monopterus_albus
ENSXCOG00000015871	-	96	59.028	ENSORLG00000007308	snrpc	95	92.086	Oryzias_latipes
ENSXCOG00000015871	-	57	82.418	ENSPKIG00000003136	snrpc	52	68.293	Paramormyrops_kingsleyae
ENSXCOG00000015871	-	100	95.745	ENSPMGG00000022162	snrpc	100	95.745	Periophthalmus_magnuspinnatus
ENSXCOG00000015871	-	100	72.917	ENSPFOG00000015174	snrpc	98	95.139	Poecilia_formosa
ENSXCOG00000015871	-	100	72.917	ENSPLAG00000012311	snrpc	98	95.139	Poecilia_latipinna
ENSXCOG00000015871	-	100	72.917	ENSPMEG00000010274	snrpc	98	95.139	Poecilia_mexicana
ENSXCOG00000015871	-	100	73.239	ENSPREG00000013017	snrpc	79	67.606	Poecilia_reticulata
ENSXCOG00000015871	-	98	62.252	ENSSBOG00000023189	-	60	53.465	Saimiri_boliviensis_boliviensis
ENSXCOG00000015871	-	100	91.724	ENSTRUG00000021651	snrpc	98	91.724	Takifugu_rubripes
ENSXCOG00000015871	-	100	83.648	ENSTNIG00000018307	snrpc	98	83.648	Tetraodon_nigroviridis
ENSXCOG00000015871	-	99	72.727	ENSVVUG00000010467	-	64	54.783	Vulpes_vulpes
ENSXCOG00000015871	-	100	72.917	ENSXMAG00000017935	snrpc	98	95.139	Xiphophorus_maculatus