EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000015905 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
28820 bases
Position
chrKQ557208.1:5341991-5370810
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000021256Fox-1_CPF12414.82.3e-0611
ENSXCOP00000021256RRM_1PF00076.221.1e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000021516-900-ENSXCOP00000021256299 (aa)--
Gene Model
Click here to download ENSXCOG00000015905's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015905's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000015905-9248.071ENSXCOG00000018262rbfox3b7555.556
ENSXCOG00000015905-5459.500ENSXCOG00000013643rbfox26284.091
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000015905-8180.303ENSG00000100320RBFOX26783.721Homo_sapiens
ENSXCOG00000015905-9757.939ENSAPOG00000004877rbfox25883.721Acanthochromis_polyacanthus
ENSXCOG00000015905-84100.000ENSAPOG00000021561-66100.000Acanthochromis_polyacanthus
ENSXCOG00000015905-6980.303ENSAMEG00000007228RBFOX26083.721Ailuropoda_melanoleuca
ENSXCOG00000015905-9758.708ENSAOCG00000013752rbfox25883.721Amphiprion_ocellaris
ENSXCOG00000015905-84100.000ENSAOCG00000015358-67100.000Amphiprion_ocellaris
ENSXCOG00000015905-84100.000ENSAPEG00000013905-58100.000Amphiprion_percula
ENSXCOG00000015905-9758.217ENSAPEG00000022359rbfox25883.721Amphiprion_percula
ENSXCOG00000015905-8497.674ENSATEG00000009959-6697.674Anabas_testudineus
ENSXCOG00000015905-6064.249ENSAPLG00000007609RBFOX26983.721Anas_platyrhynchos
ENSXCOG00000015905-6064.249ENSACAG00000016535RBFOX25183.721Anolis_carolinensis
ENSXCOG00000015905-9757.222ENSACLG00000009744rbfox25883.721Astatotilapia_calliptera
ENSXCOG00000015905-8497.674ENSACLG00000017380-6697.674Astatotilapia_calliptera
ENSXCOG00000015905-9857.692ENSAMXG00000011451rbfox27477.778Astyanax_mexicanus
ENSXCOG00000015905-8180.303ENSBTAG00000020125RBFOX26783.721Bos_taurus
ENSXCOG00000015905-6063.684ENSCJAG00000038886-6683.721Callithrix_jacchus
ENSXCOG00000015905-8180.303ENSCJAG00000019456-6783.721Callithrix_jacchus
ENSXCOG00000015905-8180.303ENSCAFG00000001701RBFOX26883.721Canis_familiaris
ENSXCOG00000015905-8180.303ENSCAFG00020004541RBFOX25283.721Canis_lupus_dingo
ENSXCOG00000015905-8180.303ENSCHIG00000014027RBFOX26883.721Capra_hircus
ENSXCOG00000015905-9080.303ENSTSYG00000014123RBFOX26683.721Carlito_syrichta
ENSXCOG00000015905-8549.383ENSCAPG00000014308RBFOX25377.419Cavia_aperea
ENSXCOG00000015905-8180.303ENSCPOG00000022180RBFOX26883.721Cavia_porcellus
ENSXCOG00000015905-8180.303ENSCCAG00000036584RBFOX26683.721Cebus_capucinus
ENSXCOG00000015905-8180.303ENSCATG00000038655RBFOX26683.721Cercocebus_atys
ENSXCOG00000015905-9180.303ENSCLAG00000017106RBFOX26983.721Chinchilla_lanigera
ENSXCOG00000015905-6063.212ENSCSAG00000008110RBFOX25163.212Chlorocebus_sabaeus
ENSXCOG00000015905-6465.517ENSCHOG00000002887RBFOX26464.583Choloepus_hoffmanni
ENSXCOG00000015905-8164.249ENSCPBG00000023144RBFOX26483.721Chrysemys_picta_bellii
ENSXCOG00000015905-8180.303ENSCANG00000035832RBFOX26683.721Colobus_angolensis_palliatus
ENSXCOG00000015905-6064.249ENSCGRG00001017727Rbfox26883.721Cricetulus_griseus_chok1gshd
ENSXCOG00000015905-8180.303ENSCGRG00000014237Rbfox26883.721Cricetulus_griseus_crigri
ENSXCOG00000015905-84100.000ENSCSEG00000007360-62100.000Cynoglossus_semilaevis
ENSXCOG00000015905-86100.000ENSCVAG00000016503-72100.000Cyprinodon_variegatus
ENSXCOG00000015905-6054.772ENSDARG00000052182rbfox26380.583Danio_rerio
ENSXCOG00000015905-6063.684ENSDNOG00000004372RBFOX25883.721Dasypus_novemcinctus
ENSXCOG00000015905-6063.684ENSDORG00000015003Rbfox25462.176Dipodomys_ordii
ENSXCOG00000015905-8180.303ENSEASG00005018920RBFOX25183.721Equus_asinus_asinus
ENSXCOG00000015905-8180.303ENSECAG00000018923RBFOX25183.721Equus_caballus
ENSXCOG00000015905-7776.923ENSEEUG00000004549RBFOX25779.310Erinaceus_europaeus
ENSXCOG00000015905-9564.134ENSELUG00000009404-6071.556Esox_lucius
ENSXCOG00000015905-6757.708ENSELUG00000000102rbfox26572.340Esox_lucius
ENSXCOG00000015905-8180.303ENSFCAG00000010061RBFOX26683.721Felis_catus
ENSXCOG00000015905-6063.212ENSFALG00000013111RBFOX26783.721Ficedula_albicollis
ENSXCOG00000015905-9758.774ENSFHEG00000010546rbfox28662.162Fundulus_heteroclitus
ENSXCOG00000015905-5686.885ENSGMOG00000000381-5297.674Gadus_morhua
ENSXCOG00000015905-9375.000ENSGMOG00000005278rbfox26983.721Gadus_morhua
ENSXCOG00000015905-6064.249ENSGALG00000012540RBFOX25164.249Gallus_gallus
ENSXCOG00000015905-5556.621ENSGAFG00000008448rbfox25882.759Gambusia_affinis
ENSXCOG00000015905-9769.014ENSGACG00000015968rbfox26683.721Gasterosteus_aculeatus
ENSXCOG00000015905-9486.301ENSGACG00000007174-6797.674Gasterosteus_aculeatus
ENSXCOG00000015905-8180.303ENSGAGG00000025884RBFOX26883.721Gopherus_agassizii
ENSXCOG00000015905-8180.303ENSGGOG00000037332RBFOX26683.721Gorilla_gorilla
ENSXCOG00000015905-9757.222ENSHBUG00000004356rbfox26183.721Haplochromis_burtoni
ENSXCOG00000015905-8497.674ENSHBUG00000000856-6197.674Haplochromis_burtoni
ENSXCOG00000015905-8180.303ENSHGLG00000012907RBFOX26183.721Heterocephalus_glaber_female
ENSXCOG00000015905-8180.303ENSHGLG00100009986RBFOX26083.721Heterocephalus_glaber_male
ENSXCOG00000015905-9765.819ENSHCOG00000005662-5697.674Hippocampus_comes
ENSXCOG00000015905-9756.389ENSHCOG00000016102rbfox25881.395Hippocampus_comes
ENSXCOG00000015905-9856.164ENSIPUG00000016896rbfox27475.556Ictalurus_punctatus
ENSXCOG00000015905-8180.303ENSSTOG00000014841RBFOX26883.721Ictidomys_tridecemlineatus
ENSXCOG00000015905-6063.212ENSJJAG00000014885Rbfox26983.721Jaculus_jaculus
ENSXCOG00000015905-9757.022ENSKMAG00000021880-5883.721Kryptolebias_marmoratus
ENSXCOG00000015905-8597.674ENSKMAG00000013354-7497.674Kryptolebias_marmoratus
ENSXCOG00000015905-7771.642ENSLACG00000003339RBFOX25379.070Latimeria_chalumnae
ENSXCOG00000015905-8176.923ENSLAFG00000027140RBFOX26183.721Loxodonta_africana
ENSXCOG00000015905-8180.303ENSMFAG00000031994RBFOX26683.721Macaca_fascicularis
ENSXCOG00000015905-8180.303ENSMMUG00000014010RBFOX26683.721Macaca_mulatta
ENSXCOG00000015905-8180.303ENSMNEG00000034388RBFOX26683.721Macaca_nemestrina
ENSXCOG00000015905-8180.303ENSMLEG00000005854RBFOX26683.721Mandrillus_leucophaeus
ENSXCOG00000015905-8395.349ENSMAMG00000008980-6095.349Mastacembelus_armatus
ENSXCOG00000015905-9572.558ENSMAMG00000004293rbfox26983.721Mastacembelus_armatus
ENSXCOG00000015905-8497.674ENSMZEG00005004959-6697.674Maylandia_zebra
ENSXCOG00000015905-9857.382ENSMZEG00005023838rbfox27383.721Maylandia_zebra
ENSXCOG00000015905-7060.987ENSMAUG00000018816Rbfox26883.721Mesocricetus_auratus
ENSXCOG00000015905-7047.273ENSMICG00000046341-5547.534Microcebus_murinus
ENSXCOG00000015905-8180.303ENSMICG00000035417RBFOX26783.721Microcebus_murinus
ENSXCOG00000015905-6063.212ENSMOCG00000009327Rbfox26883.721Microtus_ochrogaster
ENSXCOG00000015905-7683.721ENSMMOG00000008287rbfox25883.721Mola_mola
ENSXCOG00000015905-8180.303ENSMODG00000001122RBFOX26083.721Monodelphis_domestica
ENSXCOG00000015905-6058.475ENSMALG00000000623rbfox26086.364Monopterus_albus
ENSXCOG00000015905-6063.212MGP_CAROLIEiJ_G0019957Rbfox26883.721Mus_caroli
ENSXCOG00000015905-8180.303ENSMUSG00000033565Rbfox26883.721Mus_musculus
ENSXCOG00000015905-6063.212MGP_PahariEiJ_G0019967Rbfox26883.721Mus_pahari
ENSXCOG00000015905-6063.212MGP_SPRETEiJ_G0020860Rbfox26883.721Mus_spretus
ENSXCOG00000015905-8180.303ENSMPUG00000012555RBFOX25783.721Mustela_putorius_furo
ENSXCOG00000015905-7583.721ENSMLUG00000002676RBFOX25783.721Myotis_lucifugus
ENSXCOG00000015905-6062.694ENSNGAG00000020528Rbfox26883.721Nannospalax_galili
ENSXCOG00000015905-7184.279ENSNBRG00000001568-5984.279Neolamprologus_brichardi
ENSXCOG00000015905-9757.222ENSNBRG00000018155rbfox25883.721Neolamprologus_brichardi
ENSXCOG00000015905-6980.303ENSNLEG00000034979RBFOX25083.721Nomascus_leucogenys
ENSXCOG00000015905-8180.303ENSMEUG00000001547RBFOX26183.721Notamacropus_eugenii
ENSXCOG00000015905-8180.303ENSOPRG00000014878RBFOX25083.721Ochotona_princeps
ENSXCOG00000015905-6980.303ENSODEG00000009937RBFOX26883.721Octodon_degus
ENSXCOG00000015905-8497.674ENSONIG00000008341-6697.674Oreochromis_niloticus
ENSXCOG00000015905-6967.580ENSONIG00000017998rbfox26483.721Oreochromis_niloticus
ENSXCOG00000015905-8166.176ENSOCUG00000001349RBFOX25584.615Oryctolagus_cuniculus
ENSXCOG00000015905-9756.704ENSORLG00000028082rbfox26783.721Oryzias_latipes
ENSXCOG00000015905-8497.674ENSORLG00000014948-5897.674Oryzias_latipes
ENSXCOG00000015905-9756.704ENSORLG00020008976rbfox26783.721Oryzias_latipes_hni
ENSXCOG00000015905-8497.674ENSORLG00020005676-5897.674Oryzias_latipes_hni
ENSXCOG00000015905-9756.704ENSORLG00015007027rbfox26783.721Oryzias_latipes_hsok
ENSXCOG00000015905-8497.674ENSORLG00015000797-5897.674Oryzias_latipes_hsok
ENSXCOG00000015905-9757.939ENSOMEG00000015966rbfox25883.721Oryzias_melastigma
ENSXCOG00000015905-8497.674ENSOMEG00000007909-5897.674Oryzias_melastigma
ENSXCOG00000015905-8180.303ENSOGAG00000033250RBFOX26883.721Otolemur_garnettii
ENSXCOG00000015905-8863.684ENSOARG00000018669RBFOX25985.000Ovis_aries
ENSXCOG00000015905-8180.303ENSPPAG00000035653RBFOX26683.721Pan_paniscus
ENSXCOG00000015905-8180.303ENSPPRG00000015635RBFOX26683.721Panthera_pardus
ENSXCOG00000015905-8180.303ENSPTIG00000019147RBFOX26783.721Panthera_tigris_altaica
ENSXCOG00000015905-8180.303ENSPTRG00000014305RBFOX26683.721Pan_troglodytes
ENSXCOG00000015905-8180.303ENSPANG00000007030RBFOX26783.721Papio_anubis
ENSXCOG00000015905-9851.811ENSPKIG00000006854-5888.636Paramormyrops_kingsleyae
ENSXCOG00000015905-9849.733ENSPKIG00000010816-9952.210Paramormyrops_kingsleyae
ENSXCOG00000015905-6063.684ENSPSIG00000017828RBFOX26883.721Pelodiscus_sinensis
ENSXCOG00000015905-7081.308ENSPMGG00000016969-6880.645Periophthalmus_magnuspinnatus
ENSXCOG00000015905-6060.793ENSPMGG00000007138rbfox26283.721Periophthalmus_magnuspinnatus
ENSXCOG00000015905-6063.212ENSPEMG00000012542Rbfox26883.721Peromyscus_maniculatus_bairdii
ENSXCOG00000015905-8180.303ENSPCIG00000021550RBFOX26883.721Phascolarctos_cinereus
ENSXCOG00000015905-70100.000ENSPFOG00000001869-9292.655Poecilia_formosa
ENSXCOG00000015905-9757.821ENSPFOG00000014209rbfox25883.721Poecilia_formosa
ENSXCOG00000015905-6057.692ENSPLAG00000017308rbfox26183.721Poecilia_latipinna
ENSXCOG00000015905-6057.627ENSPMEG00000007320rbfox26084.091Poecilia_mexicana
ENSXCOG00000015905-6057.759ENSPREG00000012955rbfox26184.091Poecilia_reticulata
ENSXCOG00000015905-6055.440ENSPCOG00000016273RBFOX26083.721Propithecus_coquereli
ENSXCOG00000015905-9757.341ENSPNYG00000016161rbfox25883.721Pundamilia_nyererei
ENSXCOG00000015905-8497.674ENSPNYG00000020595-6697.674Pundamilia_nyererei
ENSXCOG00000015905-9750.276ENSPNAG00000000168rbfox25677.778Pygocentrus_nattereri
ENSXCOG00000015905-8180.303ENSRNOG00000004688Rbfox25783.721Rattus_norvegicus
ENSXCOG00000015905-8180.303ENSRBIG00000033696RBFOX26883.721Rhinopithecus_bieti
ENSXCOG00000015905-8180.303ENSRROG00000035715RBFOX26683.721Rhinopithecus_roxellana
ENSXCOG00000015905-8180.303ENSSBOG00000028291RBFOX26683.721Saimiri_boliviensis_boliviensis
ENSXCOG00000015905-6064.737ENSSHAG00000006835RBFOX25883.721Sarcophilus_harrisii
ENSXCOG00000015905-7868.443ENSSFOG00015013291-7372.000Scleropages_formosus
ENSXCOG00000015905-9858.470ENSSFOG00015010482-7590.909Scleropages_formosus
ENSXCOG00000015905-9866.304ENSSMAG00000004317-6597.674Scophthalmus_maximus
ENSXCOG00000015905-9758.310ENSSMAG00000013662rbfox25886.047Scophthalmus_maximus
ENSXCOG00000015905-8497.674ENSSDUG00000009511-5897.674Seriola_dumerili
ENSXCOG00000015905-9758.496ENSSDUG00000004292rbfox25883.721Seriola_dumerili
ENSXCOG00000015905-8497.674ENSSLDG00000018052-5897.674Seriola_lalandi_dorsalis
ENSXCOG00000015905-6064.249ENSSPUG00000011797RBFOX25364.249Sphenodon_punctatus
ENSXCOG00000015905-8497.674ENSSPAG00000016272-5897.674Stegastes_partitus
ENSXCOG00000015905-9758.989ENSSPAG00000013681rbfox25883.721Stegastes_partitus
ENSXCOG00000015905-8180.303ENSSSCG00000000152RBFOX25860.811Sus_scrofa
ENSXCOG00000015905-7073.206ENSTRUG00000007739-5671.362Takifugu_rubripes
ENSXCOG00000015905-8180.303ENSTTRG00000006922RBFOX26183.721Tursiops_truncatus
ENSXCOG00000015905-7874.545ENSUAMG00000010612RBFOX26475.000Ursus_americanus
ENSXCOG00000015905-6063.212ENSUMAG00000016785RBFOX25560.538Ursus_maritimus
ENSXCOG00000015905-6063.684ENSVPAG00000002824RBFOX25064.062Vicugna_pacos
ENSXCOG00000015905-8180.303ENSVVUG00000023561RBFOX26083.721Vulpes_vulpes
ENSXCOG00000015905-9956.284ENSXMAG00000029498rbfox26883.721Xiphophorus_maculatus
ENSXCOG00000015905-84100.000ENSXMAG00000026769-58100.000Xiphophorus_maculatus

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