EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000015947 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 9001 bases
Position: chrKQ557220.1:27338721-27347721
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000021307	zf-C2H2	PF00096.26	1.9e-59	1	10
ENSXCOP00000021307	zf-C2H2	PF00096.26	1.9e-59	2	10
ENSXCOP00000021307	zf-C2H2	PF00096.26	1.9e-59	3	10
ENSXCOP00000021307	zf-C2H2	PF00096.26	1.9e-59	4	10
ENSXCOP00000021307	zf-C2H2	PF00096.26	1.9e-59	5	10
ENSXCOP00000021307	zf-C2H2	PF00096.26	1.9e-59	6	10
ENSXCOP00000021307	zf-C2H2	PF00096.26	1.9e-59	7	10
ENSXCOP00000021307	zf-C2H2	PF00096.26	1.9e-59	8	10
ENSXCOP00000021307	zf-C2H2	PF00096.26	1.9e-59	9	10
ENSXCOP00000021307	zf-C2H2	PF00096.26	1.9e-59	10	10
ENSXCOP00000021307	zf-met	PF12874.7	2.5e-18	1	3
ENSXCOP00000021307	zf-met	PF12874.7	2.5e-18	2	3
ENSXCOP00000021307	zf-met	PF12874.7	2.5e-18	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000021567	-	1335	-	ENSXCOP00000021307	444 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000015947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000015947's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000015947	-	90	46.835	ENSXCOG00000002869	-	63	37.313
ENSXCOG00000015947	-	94	38.462	ENSXCOG00000007987	-	78	34.450
ENSXCOG00000015947	-	98	41.603	ENSXCOG00000008116	-	98	41.038
ENSXCOG00000015947	-	93	42.748	ENSXCOG00000007139	-	70	40.959
ENSXCOG00000015947	-	98	47.222	ENSXCOG00000001116	-	88	47.222
ENSXCOG00000015947	-	98	43.542	ENSXCOG00000002512	-	82	43.542
ENSXCOG00000015947	-	98	43.077	ENSXCOG00000003530	-	85	43.077
ENSXCOG00000015947	-	97	35.484	ENSXCOG00000009768	-	77	34.783
ENSXCOG00000015947	-	98	51.282	ENSXCOG00000009777	-	70	51.282
ENSXCOG00000015947	-	93	40.741	ENSXCOG00000014360	-	51	40.741
ENSXCOG00000015947	-	88	38.824	ENSXCOG00000019675	scrt1b	60	38.824
ENSXCOG00000015947	-	90	48.810	ENSXCOG00000003484	-	61	48.810
ENSXCOG00000015947	-	93	50.909	ENSXCOG00000020768	-	74	50.909
ENSXCOG00000015947	-	99	33.566	ENSXCOG00000002714	-	94	33.566
ENSXCOG00000015947	-	92	42.593	ENSXCOG00000016117	-	100	40.594
ENSXCOG00000015947	-	97	54.286	ENSXCOG00000011372	-	81	54.286
ENSXCOG00000015947	-	91	41.053	ENSXCOG00000020769	-	85	41.053
ENSXCOG00000015947	-	92	45.000	ENSXCOG00000001226	-	91	45.000
ENSXCOG00000015947	-	92	45.614	ENSXCOG00000013787	-	65	34.354
ENSXCOG00000015947	-	92	42.574	ENSXCOG00000000528	-	83	42.574
ENSXCOG00000015947	-	92	46.988	ENSXCOG00000017328	-	79	46.988
ENSXCOG00000015947	-	97	37.895	ENSXCOG00000003472	-	81	42.632
ENSXCOG00000015947	-	94	41.322	ENSXCOG00000015441	-	84	41.322
ENSXCOG00000015947	-	95	41.324	ENSXCOG00000007368	-	95	41.542
ENSXCOG00000015947	-	92	41.147	ENSXCOG00000013004	-	73	39.234
ENSXCOG00000015947	-	91	44.697	ENSXCOG00000010576	-	75	44.697
ENSXCOG00000015947	-	91	50.495	ENSXCOG00000010950	si:dkey-210j14.3	85	50.495
ENSXCOG00000015947	-	92	48.077	ENSXCOG00000001292	-	80	48.077
ENSXCOG00000015947	-	91	49.515	ENSXCOG00000019149	znf526	87	33.721
ENSXCOG00000015947	-	95	36.943	ENSXCOG00000009597	ZNF319	92	36.943
ENSXCOG00000015947	-	85	43.182	ENSXCOG00000009674	-	94	43.182
ENSXCOG00000015947	-	99	42.544	ENSXCOG00000002857	-	93	43.290
ENSXCOG00000015947	-	91	41.315	ENSXCOG00000007396	-	87	41.315
ENSXCOG00000015947	-	93	48.039	ENSXCOG00000013306	-	64	48.039
ENSXCOG00000015947	-	92	44.878	ENSXCOG00000007945	-	88	44.737
ENSXCOG00000015947	-	92	51.786	ENSXCOG00000015435	-	81	51.786
ENSXCOG00000015947	-	94	37.500	ENSXCOG00000009772	-	86	37.500
ENSXCOG00000015947	-	91	45.536	ENSXCOG00000009186	-	92	45.536
ENSXCOG00000015947	-	92	40.417	ENSXCOG00000007937	-	80	40.187
ENSXCOG00000015947	-	92	38.889	ENSXCOG00000014361	-	65	38.889
ENSXCOG00000015947	-	92	40.265	ENSXCOG00000014363	-	62	40.265
ENSXCOG00000015947	-	89	40.000	ENSXCOG00000005697	-	99	40.000
ENSXCOG00000015947	-	97	38.095	ENSXCOG00000009668	-	83	38.095
ENSXCOG00000015947	-	92	45.946	ENSXCOG00000002473	-	88	45.946
ENSXCOG00000015947	-	94	48.544	ENSXCOG00000007406	-	99	41.728
ENSXCOG00000015947	-	91	40.807	ENSXCOG00000019457	-	95	42.748
ENSXCOG00000015947	-	92	36.242	ENSXCOG00000009794	-	80	36.577
ENSXCOG00000015947	-	96	48.810	ENSXCOG00000016567	-	80	44.898
ENSXCOG00000015947	-	92	36.047	ENSXCOG00000003093	-	87	36.047
ENSXCOG00000015947	-	90	38.222	ENSXCOG00000010488	-	56	38.222
ENSXCOG00000015947	-	92	46.078	ENSXCOG00000010567	-	93	39.831
ENSXCOG00000015947	-	92	52.239	ENSXCOG00000019484	-	96	52.239
ENSXCOG00000015947	-	92	39.462	ENSXCOG00000019481	-	84	39.462
ENSXCOG00000015947	-	94	41.026	ENSXCOG00000019482	-	86	41.026
ENSXCOG00000015947	-	93	44.156	ENSXCOG00000012645	-	55	44.156
ENSXCOG00000015947	-	94	33.741	ENSXCOG00000008567	prdm5	73	33.741
ENSXCOG00000015947	-	90	36.800	ENSXCOG00000018117	znf710b	50	36.800
ENSXCOG00000015947	-	98	51.163	ENSXCOG00000019492	-	94	53.846
ENSXCOG00000015947	-	99	41.667	ENSXCOG00000003451	-	97	42.593
ENSXCOG00000015947	-	90	43.678	ENSXCOG00000003493	-	67	46.032
ENSXCOG00000015947	-	92	40.408	ENSXCOG00000007076	-	99	38.162
ENSXCOG00000015947	-	92	37.759	ENSXCOG00000012458	-	60	38.942
ENSXCOG00000015947	-	95	41.558	ENSXCOG00000009997	-	52	41.558
ENSXCOG00000015947	-	95	43.636	ENSXCOG00000008062	-	98	45.783
ENSXCOG00000015947	-	91	38.021	ENSXCOG00000007413	-	59	42.424
ENSXCOG00000015947	-	92	38.760	ENSXCOG00000003538	-	100	36.429
ENSXCOG00000015947	-	99	30.189	ENSXCOG00000013066	-	88	30.117
ENSXCOG00000015947	-	99	42.291	ENSXCOG00000016307	-	89	48.052
ENSXCOG00000015947	-	97	39.394	ENSXCOG00000009798	-	67	38.148
ENSXCOG00000015947	-	91	45.930	ENSXCOG00000007957	-	88	41.346
ENSXCOG00000015947	-	91	52.273	ENSXCOG00000007376	-	97	43.284
ENSXCOG00000015947	-	90	41.905	ENSXCOG00000015084	snai2	60	41.905
ENSXCOG00000015947	-	92	48.624	ENSXCOG00000008978	-	98	48.624
ENSXCOG00000015947	-	76	44.898	ENSXCOG00000015428	-	92	44.898
ENSXCOG00000015947	-	91	46.789	ENSXCOG00000007941	-	91	46.789
ENSXCOG00000015947	-	92	41.453	ENSXCOG00000006553	-	84	41.453
ENSXCOG00000015947	-	94	50.769	ENSXCOG00000007981	-	87	49.231
ENSXCOG00000015947	-	95	42.000	ENSXCOG00000006614	-	90	44.203
ENSXCOG00000015947	-	92	38.922	ENSXCOG00000012924	-	100	38.922
ENSXCOG00000015947	-	90	45.536	ENSXCOG00000003438	-	70	45.536
ENSXCOG00000015947	-	96	43.662	ENSXCOG00000001200	-	91	44.697
ENSXCOG00000015947	-	99	48.252	ENSXCOG00000008083	-	99	49.275
ENSXCOG00000015947	-	97	44.898	ENSXCOG00000000254	-	88	46.591
ENSXCOG00000015947	-	92	50.467	ENSXCOG00000003532	-	75	50.467
ENSXCOG00000015947	-	92	39.474	ENSXCOG00000003537	-	76	43.846
ENSXCOG00000015947	-	91	36.420	ENSXCOG00000018315	-	91	36.420
ENSXCOG00000015947	-	99	35.036	ENSXCOG00000001645	si:dkey-89b17.4	76	35.036
ENSXCOG00000015947	-	97	40.878	ENSXCOG00000016860	-	99	41.453
ENSXCOG00000015947	-	92	43.421	ENSXCOG00000003431	-	79	43.421
ENSXCOG00000015947	-	91	34.109	ENSXCOG00000003435	-	83	32.258
ENSXCOG00000015947	-	99	35.522	ENSXCOG00000017871	zgc:113343	67	37.410
ENSXCOG00000015947	-	84	41.346	ENSXCOG00000008003	-	52	41.584
ENSXCOG00000015947	-	90	44.366	ENSXCOG00000015312	-	88	38.095
ENSXCOG00000015947	-	92	45.545	ENSXCOG00000002898	-	82	46.667
ENSXCOG00000015947	-	92	42.241	ENSXCOG00000019377	-	97	38.617
ENSXCOG00000015947	-	92	35.833	ENSXCOG00000010259	-	56	34.091
ENSXCOG00000015947	-	90	32.911	ENSXCOG00000013504	znf384l	52	36.493
ENSXCOG00000015947	-	93	43.165	ENSXCOG00000019382	-	77	43.382
ENSXCOG00000015947	-	94	41.905	ENSXCOG00000007979	-	69	41.564
ENSXCOG00000015947	-	90	40.404	ENSXCOG00000003441	-	57	34.979
ENSXCOG00000015947	-	99	42.453	ENSXCOG00000003468	-	85	35.433
ENSXCOG00000015947	-	92	41.096	ENSXCOG00000009785	-	63	36.842
ENSXCOG00000015947	-	90	50.685	ENSXCOG00000010948	-	63	45.977
ENSXCOG00000015947	-	95	41.518	ENSXCOG00000011725	-	97	37.313
ENSXCOG00000015947	-	99	43.548	ENSXCOG00000007529	-	98	43.802
ENSXCOG00000015947	-	94	43.367	ENSXCOG00000007994	-	90	42.520
ENSXCOG00000015947	-	93	36.250	ENSXCOG00000009992	zbtb47b	85	36.287
ENSXCOG00000015947	-	90	45.763	ENSXCOG00000009665	-	71	47.170
ENSXCOG00000015947	-	94	34.188	ENSXCOG00000007499	zbtb41	66	34.188
ENSXCOG00000015947	-	91	40.566	ENSXCOG00000003499	-	59	44.355
ENSXCOG00000015947	-	92	52.222	ENSXCOG00000006951	-	76	52.222
ENSXCOG00000015947	-	92	45.556	ENSXCOG00000018615	-	86	45.556
ENSXCOG00000015947	-	95	43.103	ENSXCOG00000000036	znf341	59	44.681
ENSXCOG00000015947	-	96	44.444	ENSXCOG00000009003	-	97	42.857
ENSXCOG00000015947	-	98	41.026	ENSXCOG00000007414	-	94	35.457
ENSXCOG00000015947	-	98	38.750	ENSXCOG00000012921	-	100	39.211
ENSXCOG00000015947	-	95	51.163	ENSXCOG00000019443	-	96	47.458
ENSXCOG00000015947	-	96	50.820	ENSXCOG00000019401	-	93	50.820
ENSXCOG00000015947	-	93	37.607	ENSXCOG00000003001	-	89	37.607
ENSXCOG00000015947	-	100	35.792	ENSXCOG00000013870	-	72	36.272
ENSXCOG00000015947	-	93	44.444	ENSXCOG00000009781	-	78	50.000
ENSXCOG00000015947	-	94	44.340	ENSXCOG00000018253	-	97	44.340
ENSXCOG00000015947	-	95	38.243	ENSXCOG00000000354	-	73	38.860
ENSXCOG00000015947	-	90	39.423	ENSXCOG00000019861	-	59	39.423

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000015947	-	98	91.729	ENSAPOG00000002213	-	90	78.619	Acanthochromis_polyacanthus
ENSXCOG00000015947	-	92	89.062	ENSACIG00000013163	-	79	89.062	Amphilophus_citrinellus
ENSXCOG00000015947	-	95	46.809	ENSACIG00000013149	-	82	46.809	Amphilophus_citrinellus
ENSXCOG00000015947	-	98	91.729	ENSAOCG00000013124	-	93	86.219	Amphiprion_ocellaris
ENSXCOG00000015947	-	98	91.729	ENSAPEG00000009997	-	93	86.219	Amphiprion_percula
ENSXCOG00000015947	-	99	92.481	ENSATEG00000004127	-	98	88.400	Anabas_testudineus
ENSXCOG00000015947	-	98	93.130	ENSACLG00000005708	-	89	85.866	Astatotilapia_calliptera
ENSXCOG00000015947	-	90	92.366	ENSCVAG00000014734	-	98	73.016	Cyprinodon_variegatus
ENSXCOG00000015947	-	94	74.457	ENSFHEG00000014060	-	61	97.638	Fundulus_heteroclitus
ENSXCOG00000015947	-	96	57.416	ENSGMOG00000017526	-	94	67.273	Gadus_morhua
ENSXCOG00000015947	-	99	99.237	ENSGAFG00000011174	-	92	90.813	Gambusia_affinis
ENSXCOG00000015947	-	98	70.110	ENSGACG00000019550	-	88	70.110	Gasterosteus_aculeatus
ENSXCOG00000015947	-	98	93.130	ENSHBUG00000006662	-	89	85.866	Haplochromis_burtoni
ENSXCOG00000015947	-	96	80.176	ENSHCOG00000003041	-	98	78.467	Hippocampus_comes
ENSXCOG00000015947	-	97	92.366	ENSKMAG00000009979	-	88	85.000	Kryptolebias_marmoratus
ENSXCOG00000015947	-	96	93.893	ENSLBEG00000010165	-	89	73.779	Labrus_bergylta
ENSXCOG00000015947	-	95	77.273	ENSMAMG00000006312	-	97	70.637	Mastacembelus_armatus
ENSXCOG00000015947	-	98	93.130	ENSMZEG00005013913	-	89	85.866	Maylandia_zebra
ENSXCOG00000015947	-	98	78.788	ENSMMOG00000011282	-	88	78.485	Mola_mola
ENSXCOG00000015947	-	99	91.729	ENSMALG00000000494	-	89	91.729	Monopterus_albus
ENSXCOG00000015947	-	99	59.667	ENSNBRG00000007602	-	87	59.333	Neolamprologus_brichardi
ENSXCOG00000015947	-	92	62.323	ENSONIG00000003856	-	99	63.610	Oreochromis_niloticus
ENSXCOG00000015947	-	99	89.313	ENSORLG00000010117	-	65	89.313	Oryzias_latipes
ENSXCOG00000015947	-	99	80.392	ENSORLG00020000219	-	89	83.392	Oryzias_latipes_hni
ENSXCOG00000015947	-	99	80.719	ENSORLG00015000258	-	89	83.746	Oryzias_latipes_hsok
ENSXCOG00000015947	-	96	81.481	ENSOMEG00000018262	-	93	81.481	Oryzias_melastigma
ENSXCOG00000015947	-	94	74.172	ENSPFOG00000013455	-	97	61.194	Poecilia_formosa
ENSXCOG00000015947	-	99	100.000	ENSPLAG00000004027	-	87	90.106	Poecilia_latipinna
ENSXCOG00000015947	-	99	81.845	ENSPMEG00000007589	-	91	91.166	Poecilia_mexicana
ENSXCOG00000015947	-	94	83.623	ENSPREG00000000153	-	89	83.623	Poecilia_reticulata
ENSXCOG00000015947	-	93	93.130	ENSPNYG00000007814	-	94	76.517	Pundamilia_nyererei
ENSXCOG00000015947	-	95	48.684	ENSPNYG00000007781	-	99	43.077	Pundamilia_nyererei
ENSXCOG00000015947	-	98	93.985	ENSSMAG00000021251	-	74	93.985	Scophthalmus_maximus
ENSXCOG00000015947	-	98	93.233	ENSSDUG00000013904	-	67	93.233	Seriola_dumerili
ENSXCOG00000015947	-	98	93.233	ENSSLDG00000006994	-	98	80.174	Seriola_lalandi_dorsalis
ENSXCOG00000015947	-	98	60.987	ENSSPAG00000011524	-	72	86.219	Stegastes_partitus
ENSXCOG00000015947	-	99	79.505	ENSTRUG00000015687	-	93	79.054	Takifugu_rubripes
ENSXCOG00000015947	-	98	80.815	ENSTNIG00000008242	-	99	80.576	Tetraodon_nigroviridis
ENSXCOG00000015947	-	99	99.237	ENSXMAG00000023291	-	96	84.163	Xiphophorus_maculatus