EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000016003 (Gene tree)
Gene ID: -
Gene Symbol: thumpd1
Alias: zgc:77221
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1908 bases
Position: chrKQ557220.1:27520697-27522604
Accession: ZDB-GENE-040426-1805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000021375	THUMP	PF02926.17	6.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000021636	-	558	-	ENSXCOP00000021375	185 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016003's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016003	thumpd1	75	79.861	ENSACIG00000024395	thumpd1	53	70.556	Amphilophus_citrinellus
ENSXCOG00000016003	thumpd1	95	69.444	ENSAOCG00000003509	thumpd1	53	68.333	Amphiprion_ocellaris
ENSXCOG00000016003	thumpd1	86	73.939	ENSAPEG00000010515	thumpd1	53	67.778	Amphiprion_percula
ENSXCOG00000016003	thumpd1	82	53.704	ENSACAG00000022881	-	90	51.829	Anolis_carolinensis
ENSXCOG00000016003	thumpd1	63	67.521	ENSCAPG00000015086	-	66	67.521	Cavia_aperea
ENSXCOG00000016003	thumpd1	75	89.583	ENSCVAG00000014960	thumpd1	51	85.976	Cyprinodon_variegatus
ENSXCOG00000016003	thumpd1	82	52.980	ENSEASG00005017428	-	65	58.915	Equus_asinus_asinus
ENSXCOG00000016003	thumpd1	82	56.579	ENSGALG00000031384	-	62	60.741	Gallus_gallus
ENSXCOG00000016003	thumpd1	88	94.479	ENSGAFG00000011000	thumpd1	51	94.479	Gambusia_affinis
ENSXCOG00000016003	thumpd1	78	74.534	ENSGACG00000019511	thumpd1	53	67.978	Gasterosteus_aculeatus
ENSXCOG00000016003	thumpd1	63	58.120	ENSHGLG00000000952	-	50	58.120	Heterocephalus_glaber_female
ENSXCOG00000016003	thumpd1	63	58.120	ENSHGLG00100010577	-	50	58.120	Heterocephalus_glaber_male
ENSXCOG00000016003	thumpd1	72	60.741	ENSMGAG00000010340	THUMPD1	66	60.741	Meleagris_gallopavo
ENSXCOG00000016003	thumpd1	97	51.531	ENSMAUG00000013306	Thumpd1	56	50.510	Mesocricetus_auratus
ENSXCOG00000016003	thumpd1	95	66.111	ENSNBRG00000006987	thumpd1	52	64.362	Neolamprologus_brichardi
ENSXCOG00000016003	thumpd1	87	50.932	ENSOCUG00000025354	-	53	63.248	Oryctolagus_cuniculus
ENSXCOG00000016003	thumpd1	88	76.074	ENSORLG00000027557	thumpd1	52	76.687	Oryzias_latipes
ENSXCOG00000016003	thumpd1	81	73.248	ENSOMEG00000019361	thumpd1	56	68.132	Oryzias_melastigma
ENSXCOG00000016003	thumpd1	78	49.655	ENSPMAG00000001389	thumpd1	55	54.701	Petromyzon_marinus
ENSXCOG00000016003	thumpd1	88	96.914	ENSPFOG00000012649	thumpd1	50	96.914	Poecilia_formosa
ENSXCOG00000016003	thumpd1	88	96.319	ENSPLAG00000000137	thumpd1	51	96.319	Poecilia_latipinna
ENSXCOG00000016003	thumpd1	88	96.914	ENSPMEG00000007750	thumpd1	51	96.914	Poecilia_mexicana
ENSXCOG00000016003	thumpd1	63	61.538	ENSPVAG00000003286	-	52	61.538	Pteropus_vampyrus
ENSXCOG00000016003	thumpd1	97	51.256	ENSRNOG00000014946	AABR07005588.1	53	69.231	Rattus_norvegicus
ENSXCOG00000016003	thumpd1	90	71.930	ENSSDUG00000014502	thumpd1	51	70.520	Seriola_dumerili
ENSXCOG00000016003	thumpd1	90	71.930	ENSSLDG00000007694	thumpd1	51	70.520	Seriola_lalandi_dorsalis
ENSXCOG00000016003	thumpd1	79	59.459	ENSSPUG00000005096	THUMPD1	77	60.714	Sphenodon_punctatus
ENSXCOG00000016003	thumpd1	88	76.048	ENSSPAG00000006993	thumpd1	51	74.850	Stegastes_partitus
ENSXCOG00000016003	thumpd1	84	50.000	ENSUAMG00000005779	-	73	50.000	Ursus_americanus
ENSXCOG00000016003	thumpd1	88	97.546	ENSXMAG00000026052	thumpd1	51	97.546	Xiphophorus_maculatus