EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000016085 (Gene tree)
Gene ID: -
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 6172 bases
Position: chrKQ557221.1:18800225-18806396
Accession: ZDB-GENE-030826-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000021484	efThoc1	PF11957.8	2.3e-130	1	2
ENSXCOP00000021484	efThoc1	PF11957.8	2.3e-130	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000021747	-	1947	-	ENSXCOP00000021484	648 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016085	thoc1	89	70.213	ENSG00000079134	THOC1	99	70.221	Homo_sapiens
ENSXCOG00000016085	thoc1	89	70.540	ENSAMEG00000006645	THOC1	92	70.540	Ailuropoda_melanoleuca
ENSXCOG00000016085	thoc1	90	82.609	ENSACIG00000019392	thoc1	96	82.609	Amphilophus_citrinellus
ENSXCOG00000016085	thoc1	89	91.738	ENSAOCG00000008391	thoc1	94	91.738	Amphiprion_ocellaris
ENSXCOG00000016085	thoc1	89	91.910	ENSAPEG00000001093	thoc1	94	86.971	Amphiprion_percula
ENSXCOG00000016085	thoc1	89	86.130	ENSATEG00000004783	thoc1	94	86.130	Anabas_testudineus
ENSXCOG00000016085	thoc1	89	69.657	ENSAPLG00000016149	THOC1	92	69.657	Anas_platyrhynchos
ENSXCOG00000016085	thoc1	89	70.147	ENSACAG00000008307	THOC1	90	69.494	Anolis_carolinensis
ENSXCOG00000016085	thoc1	89	69.741	ENSANAG00000033200	THOC1	93	69.741	Aotus_nancymaae
ENSXCOG00000016085	thoc1	89	85.505	ENSACLG00000016836	thoc1	94	85.505	Astatotilapia_calliptera
ENSXCOG00000016085	thoc1	90	70.840	ENSAMXG00000014708	thoc1	98	70.159	Astyanax_mexicanus
ENSXCOG00000016085	thoc1	89	70.540	ENSBTAG00000019215	THOC1	93	70.540	Bos_taurus
ENSXCOG00000016085	thoc1	67	34.304	WBGene00020172	thoc-1	75	33.002	Caenorhabditis_elegans
ENSXCOG00000016085	thoc1	89	70.376	ENSCJAG00000020450	THOC1	93	70.376	Callithrix_jacchus
ENSXCOG00000016085	thoc1	89	70.540	ENSCAFG00000018324	THOC1	93	70.540	Canis_familiaris
ENSXCOG00000016085	thoc1	89	70.540	ENSCAFG00020017894	THOC1	93	70.540	Canis_lupus_dingo
ENSXCOG00000016085	thoc1	89	70.540	ENSCHIG00000015399	THOC1	95	70.540	Capra_hircus
ENSXCOG00000016085	thoc1	89	70.376	ENSTSYG00000010585	THOC1	92	70.376	Carlito_syrichta
ENSXCOG00000016085	thoc1	89	56.314	ENSCAPG00000016270	THOC1	93	56.314	Cavia_aperea
ENSXCOG00000016085	thoc1	89	69.722	ENSCPOG00000000959	THOC1	93	69.722	Cavia_porcellus
ENSXCOG00000016085	thoc1	89	70.376	ENSCCAG00000025766	THOC1	93	70.376	Cebus_capucinus
ENSXCOG00000016085	thoc1	89	67.921	ENSCATG00000028180	THOC1	90	78.462	Cercocebus_atys
ENSXCOG00000016085	thoc1	89	70.213	ENSCLAG00000009117	THOC1	95	70.213	Chinchilla_lanigera
ENSXCOG00000016085	thoc1	89	70.376	ENSCSAG00000017631	THOC1	93	70.376	Chlorocebus_sabaeus
ENSXCOG00000016085	thoc1	74	75.519	ENSCHOG00000010609	THOC1	78	75.519	Choloepus_hoffmanni
ENSXCOG00000016085	thoc1	89	70.425	ENSCPBG00000027558	THOC1	93	70.425	Chrysemys_picta_bellii
ENSXCOG00000016085	thoc1	65	48.140	ENSCING00000007663	-	91	48.148	Ciona_intestinalis
ENSXCOG00000016085	thoc1	88	48.548	ENSCSAVG00000010649	-	99	48.387	Ciona_savignyi
ENSXCOG00000016085	thoc1	89	70.376	ENSCANG00000034265	THOC1	91	78.462	Colobus_angolensis_palliatus
ENSXCOG00000016085	thoc1	89	70.049	ENSCGRG00001016464	Thoc1	92	70.049	Cricetulus_griseus_chok1gshd
ENSXCOG00000016085	thoc1	85	56.388	ENSCGRG00000003390	-	97	56.388	Cricetulus_griseus_crigri
ENSXCOG00000016085	thoc1	89	70.049	ENSCGRG00000010269	-	95	70.049	Cricetulus_griseus_crigri
ENSXCOG00000016085	thoc1	89	82.362	ENSCSEG00000012486	thoc1	99	81.350	Cynoglossus_semilaevis
ENSXCOG00000016085	thoc1	91	84.897	ENSCVAG00000020600	thoc1	96	85.304	Cyprinodon_variegatus
ENSXCOG00000016085	thoc1	89	78.990	ENSDARG00000088246	thoc1	94	78.990	Danio_rerio
ENSXCOG00000016085	thoc1	89	70.704	ENSDNOG00000019217	THOC1	93	70.704	Dasypus_novemcinctus
ENSXCOG00000016085	thoc1	89	65.466	ENSDORG00000008060	Thoc1	94	65.466	Dipodomys_ordii
ENSXCOG00000016085	thoc1	88	36.501	FBgn0037382	Hpr1	70	41.651	Drosophila_melanogaster
ENSXCOG00000016085	thoc1	79	52.834	ENSETEG00000004165	THOC1	83	55.061	Echinops_telfairi
ENSXCOG00000016085	thoc1	87	60.566	ENSEBUG00000005998	thoc1	97	61.730	Eptatretus_burgeri
ENSXCOG00000016085	thoc1	89	70.376	ENSEASG00005002549	THOC1	89	70.213	Equus_asinus_asinus
ENSXCOG00000016085	thoc1	89	70.540	ENSECAG00000009267	THOC1	83	70.540	Equus_caballus
ENSXCOG00000016085	thoc1	76	58.865	ENSEEUG00000012214	-	77	58.865	Erinaceus_europaeus
ENSXCOG00000016085	thoc1	89	79.870	ENSELUG00000023277	thoc1	94	79.870	Esox_lucius
ENSXCOG00000016085	thoc1	89	70.704	ENSFCAG00000022454	THOC1	80	70.704	Felis_catus
ENSXCOG00000016085	thoc1	89	69.805	ENSFALG00000006205	THOC1	95	69.805	Ficedula_albicollis
ENSXCOG00000016085	thoc1	89	70.049	ENSFDAG00000006842	THOC1	94	70.049	Fukomys_damarensis
ENSXCOG00000016085	thoc1	91	90.772	ENSFHEG00000008841	thoc1	98	90.772	Fundulus_heteroclitus
ENSXCOG00000016085	thoc1	91	80.569	ENSGMOG00000011486	thoc1	96	80.569	Gadus_morhua
ENSXCOG00000016085	thoc1	89	69.444	ENSGALG00000014915	THOC1	93	68.548	Gallus_gallus
ENSXCOG00000016085	thoc1	91	96.284	ENSGAFG00000021464	thoc1	98	96.284	Gambusia_affinis
ENSXCOG00000016085	thoc1	89	84.691	ENSGACG00000017361	thoc1	98	81.453	Gasterosteus_aculeatus
ENSXCOG00000016085	thoc1	89	75.043	ENSGAGG00000021230	-	90	75.043	Gopherus_agassizii
ENSXCOG00000016085	thoc1	89	70.376	ENSGGOG00000003013	THOC1	92	70.376	Gorilla_gorilla
ENSXCOG00000016085	thoc1	89	85.668	ENSHBUG00000009096	thoc1	94	85.668	Haplochromis_burtoni
ENSXCOG00000016085	thoc1	70	65.990	ENSHGLG00000009264	-	98	69.189	Heterocephalus_glaber_female
ENSXCOG00000016085	thoc1	89	70.049	ENSHGLG00000003712	-	93	70.049	Heterocephalus_glaber_female
ENSXCOG00000016085	thoc1	77	57.754	ENSHGLG00100002225	-	98	57.754	Heterocephalus_glaber_male
ENSXCOG00000016085	thoc1	89	70.049	ENSHGLG00100003570	THOC1	93	70.049	Heterocephalus_glaber_male
ENSXCOG00000016085	thoc1	76	76.145	ENSIPUG00000005306	thoc1	91	75.000	Ictalurus_punctatus
ENSXCOG00000016085	thoc1	89	70.540	ENSSTOG00000006484	THOC1	93	70.540	Ictidomys_tridecemlineatus
ENSXCOG00000016085	thoc1	50	74.769	ENSJJAG00000014893	-	90	74.769	Jaculus_jaculus
ENSXCOG00000016085	thoc1	89	85.831	ENSKMAG00000003904	thoc1	94	85.831	Kryptolebias_marmoratus
ENSXCOG00000016085	thoc1	91	84.102	ENSLBEG00000020372	thoc1	94	84.102	Labrus_bergylta
ENSXCOG00000016085	thoc1	89	72.222	ENSLACG00000014869	THOC1	93	71.895	Latimeria_chalumnae
ENSXCOG00000016085	thoc1	89	77.922	ENSLOCG00000002097	thoc1	94	77.597	Lepisosteus_oculatus
ENSXCOG00000016085	thoc1	89	70.376	ENSLAFG00000009585	THOC1	93	70.376	Loxodonta_africana
ENSXCOG00000016085	thoc1	89	70.376	ENSMFAG00000041520	THOC1	92	70.376	Macaca_fascicularis
ENSXCOG00000016085	thoc1	89	70.376	ENSMMUG00000004662	THOC1	93	70.376	Macaca_mulatta
ENSXCOG00000016085	thoc1	89	70.376	ENSMNEG00000040177	THOC1	92	70.376	Macaca_nemestrina
ENSXCOG00000016085	thoc1	89	70.376	ENSMLEG00000034201	THOC1	92	70.376	Mandrillus_leucophaeus
ENSXCOG00000016085	thoc1	89	84.098	ENSMAMG00000016747	thoc1	98	84.098	Mastacembelus_armatus
ENSXCOG00000016085	thoc1	89	85.505	ENSMZEG00005024609	thoc1	94	85.505	Maylandia_zebra
ENSXCOG00000016085	thoc1	89	68.943	ENSMGAG00000009811	THOC1	95	68.943	Meleagris_gallopavo
ENSXCOG00000016085	thoc1	89	69.558	ENSMAUG00000010272	Thoc1	92	69.558	Mesocricetus_auratus
ENSXCOG00000016085	thoc1	89	70.376	ENSMICG00000027200	THOC1	93	70.376	Microcebus_murinus
ENSXCOG00000016085	thoc1	89	68.903	ENSMOCG00000014536	-	80	68.903	Microtus_ochrogaster
ENSXCOG00000016085	thoc1	87	61.307	ENSMOCG00000014924	-	88	60.738	Microtus_ochrogaster
ENSXCOG00000016085	thoc1	89	84.729	ENSMMOG00000011772	thoc1	100	84.729	Mola_mola
ENSXCOG00000016085	thoc1	89	69.417	ENSMODG00000021482	THOC1	93	69.417	Monodelphis_domestica
ENSXCOG00000016085	thoc1	92	83.176	ENSMALG00000021872	thoc1	97	83.176	Monopterus_albus
ENSXCOG00000016085	thoc1	89	69.231	MGP_CAROLIEiJ_G0021989	Thoc1	93	69.231	Mus_caroli
ENSXCOG00000016085	thoc1	89	69.394	ENSMUSG00000024287	Thoc1	93	69.394	Mus_musculus
ENSXCOG00000016085	thoc1	89	69.394	MGP_PahariEiJ_G0018726	Thoc1	93	69.394	Mus_pahari
ENSXCOG00000016085	thoc1	89	69.394	MGP_SPRETEiJ_G0022905	Thoc1	93	69.394	Mus_spretus
ENSXCOG00000016085	thoc1	89	70.540	ENSMPUG00000005448	THOC1	93	70.540	Mustela_putorius_furo
ENSXCOG00000016085	thoc1	79	65.209	ENSMLUG00000027965	-	92	65.027	Myotis_lucifugus
ENSXCOG00000016085	thoc1	89	69.608	ENSMLUG00000004090	-	93	69.608	Myotis_lucifugus
ENSXCOG00000016085	thoc1	55	68.627	ENSMLUG00000024912	-	89	68.627	Myotis_lucifugus
ENSXCOG00000016085	thoc1	89	70.049	ENSNGAG00000001401	-	93	70.049	Nannospalax_galili
ENSXCOG00000016085	thoc1	89	56.106	ENSNGAG00000008061	-	93	56.106	Nannospalax_galili
ENSXCOG00000016085	thoc1	89	83.197	ENSNBRG00000005991	thoc1	94	83.197	Neolamprologus_brichardi
ENSXCOG00000016085	thoc1	89	70.376	ENSNLEG00000006835	THOC1	93	70.376	Nomascus_leucogenys
ENSXCOG00000016085	thoc1	81	72.297	ENSMEUG00000009756	THOC1	87	72.297	Notamacropus_eugenii
ENSXCOG00000016085	thoc1	89	57.095	ENSOPRG00000001108	THOC1	92	57.095	Ochotona_princeps
ENSXCOG00000016085	thoc1	89	64.812	ENSODEG00000006623	THOC1	92	64.812	Octodon_degus
ENSXCOG00000016085	thoc1	89	85.505	ENSONIG00000009440	thoc1	92	85.434	Oreochromis_niloticus
ENSXCOG00000016085	thoc1	89	70.540	ENSOCUG00000011601	THOC1	93	70.540	Oryctolagus_cuniculus
ENSXCOG00000016085	thoc1	89	84.528	ENSORLG00000017629	thoc1	94	84.528	Oryzias_latipes
ENSXCOG00000016085	thoc1	89	84.691	ENSORLG00020007567	thoc1	94	84.691	Oryzias_latipes_hni
ENSXCOG00000016085	thoc1	89	84.528	ENSORLG00015007356	thoc1	97	84.477	Oryzias_latipes_hsok
ENSXCOG00000016085	thoc1	91	81.717	ENSOMEG00000008200	thoc1	96	81.949	Oryzias_melastigma
ENSXCOG00000016085	thoc1	89	67.430	ENSOGAG00000000470	THOC1	92	67.430	Otolemur_garnettii
ENSXCOG00000016085	thoc1	89	70.540	ENSOARG00000009238	THOC1	92	70.540	Ovis_aries
ENSXCOG00000016085	thoc1	89	70.213	ENSPPAG00000031812	THOC1	92	70.213	Pan_paniscus
ENSXCOG00000016085	thoc1	89	70.772	ENSPPRG00000023794	THOC1	90	79.077	Panthera_pardus
ENSXCOG00000016085	thoc1	89	70.772	ENSPTIG00000007469	THOC1	90	79.077	Panthera_tigris_altaica
ENSXCOG00000016085	thoc1	89	69.579	ENSPTRG00000009816	THOC1	93	69.579	Pan_troglodytes
ENSXCOG00000016085	thoc1	89	69.431	ENSPANG00000008665	THOC1	93	69.431	Papio_anubis
ENSXCOG00000016085	thoc1	89	76.585	ENSPKIG00000005906	thoc1	94	77.886	Paramormyrops_kingsleyae
ENSXCOG00000016085	thoc1	76	70.778	ENSPSIG00000007691	THOC1	97	70.778	Pelodiscus_sinensis
ENSXCOG00000016085	thoc1	90	78.491	ENSPMGG00000008279	thoc1	96	78.491	Periophthalmus_magnuspinnatus
ENSXCOG00000016085	thoc1	89	69.558	ENSPEMG00000021789	Thoc1	93	69.558	Peromyscus_maniculatus_bairdii
ENSXCOG00000016085	thoc1	69	73.333	ENSPCIG00000026942	THOC1	97	73.333	Phascolarctos_cinereus
ENSXCOG00000016085	thoc1	91	89.984	ENSPFOG00000011673	thoc1	96	90.415	Poecilia_formosa
ENSXCOG00000016085	thoc1	91	89.984	ENSPLAG00000019648	thoc1	96	90.415	Poecilia_latipinna
ENSXCOG00000016085	thoc1	91	90.143	ENSPMEG00000007083	thoc1	96	90.143	Poecilia_mexicana
ENSXCOG00000016085	thoc1	90	91.054	ENSPREG00000006719	thoc1	96	91.054	Poecilia_reticulata
ENSXCOG00000016085	thoc1	64	73.602	ENSPPYG00000009049	-	90	73.602	Pongo_abelii
ENSXCOG00000016085	thoc1	89	61.741	ENSPCAG00000005320	THOC1	85	72.172	Procavia_capensis
ENSXCOG00000016085	thoc1	89	70.279	ENSPCOG00000009234	THOC1	93	70.279	Propithecus_coquereli
ENSXCOG00000016085	thoc1	89	71.524	ENSPVAG00000004007	THOC1	92	71.524	Pteropus_vampyrus
ENSXCOG00000016085	thoc1	89	85.668	ENSPNYG00000019152	thoc1	94	85.668	Pundamilia_nyererei
ENSXCOG00000016085	thoc1	94	75.425	ENSPNAG00000023390	thoc1	98	75.232	Pygocentrus_nattereri
ENSXCOG00000016085	thoc1	85	52.158	ENSRNOG00000015332	Thoc1	94	52.158	Rattus_norvegicus
ENSXCOG00000016085	thoc1	89	69.741	ENSRBIG00000033738	THOC1	92	72.015	Rhinopithecus_bieti
ENSXCOG00000016085	thoc1	89	70.376	ENSRROG00000044988	THOC1	91	78.462	Rhinopithecus_roxellana
ENSXCOG00000016085	thoc1	89	70.049	ENSSBOG00000016556	THOC1	92	70.049	Saimiri_boliviensis_boliviensis
ENSXCOG00000016085	thoc1	89	70.425	ENSSHAG00000014829	THOC1	93	70.425	Sarcophilus_harrisii
ENSXCOG00000016085	thoc1	89	80.945	ENSSFOG00015021527	thoc1	94	80.945	Scleropages_formosus
ENSXCOG00000016085	thoc1	89	85.179	ENSSMAG00000018465	thoc1	95	85.179	Scophthalmus_maximus
ENSXCOG00000016085	thoc1	89	85.668	ENSSDUG00000016810	thoc1	94	85.668	Seriola_dumerili
ENSXCOG00000016085	thoc1	89	91.161	ENSSLDG00000015555	thoc1	89	91.161	Seriola_lalandi_dorsalis
ENSXCOG00000016085	thoc1	76	77.727	ENSSARG00000006910	THOC1	80	77.727	Sorex_araneus
ENSXCOG00000016085	thoc1	89	69.067	ENSSPUG00000007238	THOC1	93	69.067	Sphenodon_punctatus
ENSXCOG00000016085	thoc1	89	84.202	ENSSPAG00000018847	thoc1	93	84.202	Stegastes_partitus
ENSXCOG00000016085	thoc1	89	74.611	ENSSSCG00000025653	THOC1	86	74.611	Sus_scrofa
ENSXCOG00000016085	thoc1	89	70.098	ENSTGUG00000010204	THOC1	93	70.098	Taeniopygia_guttata
ENSXCOG00000016085	thoc1	91	82.989	ENSTRUG00000013518	thoc1	96	82.989	Takifugu_rubripes
ENSXCOG00000016085	thoc1	89	83.713	ENSTNIG00000008473	thoc1	94	83.713	Tetraodon_nigroviridis
ENSXCOG00000016085	thoc1	89	63.591	ENSTBEG00000016920	THOC1	92	63.591	Tupaia_belangeri
ENSXCOG00000016085	thoc1	89	64.696	ENSTTRG00000016664	THOC1	93	64.696	Tursiops_truncatus
ENSXCOG00000016085	thoc1	90	71.357	ENSUAMG00000002527	THOC1	94	70.376	Ursus_americanus
ENSXCOG00000016085	thoc1	89	70.704	ENSUMAG00000019693	THOC1	93	70.704	Ursus_maritimus
ENSXCOG00000016085	thoc1	67	65.145	ENSVPAG00000003726	-	66	65.145	Vicugna_pacos
ENSXCOG00000016085	thoc1	89	70.540	ENSVVUG00000004384	THOC1	93	70.540	Vulpes_vulpes
ENSXCOG00000016085	thoc1	89	69.530	ENSXETG00000003155	thoc1	91	69.530	Xenopus_tropicalis
ENSXCOG00000016085	thoc1	91	91.574	ENSXMAG00000002353	thoc1	96	91.574	Xiphophorus_maculatus