EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000016129 (Gene tree)
Gene ID: -
Gene Symbol: gpatch3
Alias: zgc:158863
Full Name: G patch domain containing 3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3314 bases
Position: chrKQ557218.1:17996962-18000275
Accession: ZDB-GENE-070112-902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000021544	G-patch	PF01585.23	4.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000021808	-	1329	-	ENSXCOP00000021544	442 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016129's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016129	gpatch3	97	50.996	ENSG00000198746	GPATCH3	82	72.581	Homo_sapiens
ENSXCOG00000016129	gpatch3	100	71.650	ENSAPOG00000001212	gpatch3	100	72.621	Acanthochromis_polyacanthus
ENSXCOG00000016129	gpatch3	97	51.411	ENSAMEG00000010801	GPATCH3	95	52.419	Ailuropoda_melanoleuca
ENSXCOG00000016129	gpatch3	100	73.204	ENSAOCG00000019352	gpatch3	100	73.398	Amphiprion_ocellaris
ENSXCOG00000016129	gpatch3	100	73.010	ENSAPEG00000018926	gpatch3	100	73.010	Amphiprion_percula
ENSXCOG00000016129	gpatch3	100	68.359	ENSATEG00000023759	gpatch3	99	69.727	Anabas_testudineus
ENSXCOG00000016129	gpatch3	73	63.663	ENSAPLG00000010745	GPATCH3	100	63.663	Anas_platyrhynchos
ENSXCOG00000016129	gpatch3	97	53.239	ENSACAG00000016709	GPATCH3	96	53.239	Anolis_carolinensis
ENSXCOG00000016129	gpatch3	97	52.191	ENSANAG00000035944	GPATCH3	97	52.191	Aotus_nancymaae
ENSXCOG00000016129	gpatch3	100	70.817	ENSACLG00000012807	gpatch3	99	71.595	Astatotilapia_calliptera
ENSXCOG00000016129	gpatch3	97	67.647	ENSAMXG00000034582	gpatch3	97	67.647	Astyanax_mexicanus
ENSXCOG00000016129	gpatch3	97	52.323	ENSBTAG00000014849	GPATCH3	96	52.323	Bos_taurus
ENSXCOG00000016129	gpatch3	95	37.137	WBGene00019467	K07B1.7	93	37.759	Caenorhabditis_elegans
ENSXCOG00000016129	gpatch3	97	51.394	ENSCJAG00000010000	GPATCH3	95	51.497	Callithrix_jacchus
ENSXCOG00000016129	gpatch3	97	52.515	ENSCAFG00000012265	GPATCH3	95	52.016	Canis_familiaris
ENSXCOG00000016129	gpatch3	97	52.515	ENSCAFG00020021640	GPATCH3	95	52.016	Canis_lupus_dingo
ENSXCOG00000016129	gpatch3	97	52.323	ENSCHIG00000024245	GPATCH3	94	52.323	Capra_hircus
ENSXCOG00000016129	gpatch3	97	50.598	ENSTSYG00000011753	GPATCH3	95	51.594	Carlito_syrichta
ENSXCOG00000016129	gpatch3	68	57.143	ENSCAPG00000007313	GPATCH3	94	57.143	Cavia_aperea
ENSXCOG00000016129	gpatch3	97	52.400	ENSCPOG00000010404	GPATCH3	95	52.400	Cavia_porcellus
ENSXCOG00000016129	gpatch3	97	51.394	ENSCCAG00000030482	GPATCH3	97	51.594	Cebus_capucinus
ENSXCOG00000016129	gpatch3	97	50.493	ENSCATG00000033598	GPATCH3	95	50.598	Cercocebus_atys
ENSXCOG00000016129	gpatch3	95	55.072	ENSCLAG00000012064	GPATCH3	95	54.379	Chinchilla_lanigera
ENSXCOG00000016129	gpatch3	96	55.889	ENSCPBG00000024968	GPATCH3	94	56.745	Chrysemys_picta_bellii
ENSXCOG00000016129	gpatch3	97	51.793	ENSCANG00000036795	GPATCH3	95	51.793	Colobus_angolensis_palliatus
ENSXCOG00000016129	gpatch3	97	54.167	ENSCGRG00001002930	Gpatch3	94	54.757	Cricetulus_griseus_chok1gshd
ENSXCOG00000016129	gpatch3	97	54.167	ENSCGRG00000004699	Gpatch3	94	54.757	Cricetulus_griseus_crigri
ENSXCOG00000016129	gpatch3	100	66.925	ENSCSEG00000005277	gpatch3	100	67.118	Cynoglossus_semilaevis
ENSXCOG00000016129	gpatch3	100	72.674	ENSCVAG00000000827	gpatch3	100	73.837	Cyprinodon_variegatus
ENSXCOG00000016129	gpatch3	96	67.286	ENSDARG00000052747	gpatch3	74	67.286	Danio_rerio
ENSXCOG00000016129	gpatch3	97	53.200	ENSDNOG00000016999	GPATCH3	95	53.200	Dasypus_novemcinctus
ENSXCOG00000016129	gpatch3	95	45.161	ENSEBUG00000013911	gpatch3	91	45.161	Eptatretus_burgeri
ENSXCOG00000016129	gpatch3	97	51.911	ENSEASG00005008636	GPATCH3	95	52.113	Equus_asinus_asinus
ENSXCOG00000016129	gpatch3	97	52.113	ENSECAG00000007653	GPATCH3	95	52.314	Equus_caballus
ENSXCOG00000016129	gpatch3	99	62.103	ENSELUG00000000963	gpatch3	99	62.103	Esox_lucius
ENSXCOG00000016129	gpatch3	97	52.410	ENSFCAG00000012819	GPATCH3	96	52.410	Felis_catus
ENSXCOG00000016129	gpatch3	72	62.651	ENSFALG00000000319	GPATCH3	91	62.651	Ficedula_albicollis
ENSXCOG00000016129	gpatch3	97	51.904	ENSFDAG00000016270	GPATCH3	95	51.904	Fukomys_damarensis
ENSXCOG00000016129	gpatch3	100	72.908	ENSFHEG00000015264	gpatch3	100	72.908	Fundulus_heteroclitus
ENSXCOG00000016129	gpatch3	99	60.707	ENSGMOG00000000991	gpatch3	99	60.707	Gadus_morhua
ENSXCOG00000016129	gpatch3	96	55.128	ENSGALG00000000881	GPATCH3	94	54.873	Gallus_gallus
ENSXCOG00000016129	gpatch3	99	80.157	ENSGAFG00000002531	gpatch3	90	95.541	Gambusia_affinis
ENSXCOG00000016129	gpatch3	100	68.085	ENSGACG00000007199	gpatch3	100	68.085	Gasterosteus_aculeatus
ENSXCOG00000016129	gpatch3	96	55.650	ENSGAGG00000023286	GPATCH3	94	56.503	Gopherus_agassizii
ENSXCOG00000016129	gpatch3	97	51.394	ENSGGOG00000015305	GPATCH3	95	51.394	Gorilla_gorilla
ENSXCOG00000016129	gpatch3	100	70.623	ENSHBUG00000020513	gpatch3	97	81.073	Haplochromis_burtoni
ENSXCOG00000016129	gpatch3	98	51.889	ENSHGLG00000012492	GPATCH3	97	52.087	Heterocephalus_glaber_female
ENSXCOG00000016129	gpatch3	98	51.889	ENSHGLG00100016909	GPATCH3	97	52.087	Heterocephalus_glaber_male
ENSXCOG00000016129	gpatch3	100	65.497	ENSHCOG00000005739	gpatch3	100	66.472	Hippocampus_comes
ENSXCOG00000016129	gpatch3	97	57.895	ENSIPUG00000007697	gpatch3	99	74.026	Ictalurus_punctatus
ENSXCOG00000016129	gpatch3	97	52.295	ENSSTOG00000015220	GPATCH3	95	52.295	Ictidomys_tridecemlineatus
ENSXCOG00000016129	gpatch3	96	52.535	ENSJJAG00000003292	Gpatch3	94	52.535	Jaculus_jaculus
ENSXCOG00000016129	gpatch3	100	71.401	ENSKMAG00000020717	gpatch3	100	72.361	Kryptolebias_marmoratus
ENSXCOG00000016129	gpatch3	99	67.885	ENSLBEG00000007046	gpatch3	99	67.885	Labrus_bergylta
ENSXCOG00000016129	gpatch3	96	71.028	ENSLACG00000011400	GPATCH3	79	71.028	Latimeria_chalumnae
ENSXCOG00000016129	gpatch3	100	58.708	ENSLOCG00000003858	gpatch3	100	58.708	Lepisosteus_oculatus
ENSXCOG00000016129	gpatch3	97	51.195	ENSLAFG00000016691	GPATCH3	96	51.195	Loxodonta_africana
ENSXCOG00000016129	gpatch3	97	51.394	ENSMFAG00000030918	GPATCH3	95	51.394	Macaca_fascicularis
ENSXCOG00000016129	gpatch3	97	51.394	ENSMMUG00000018723	GPATCH3	95	51.394	Macaca_mulatta
ENSXCOG00000016129	gpatch3	86	42.857	ENSMNEG00000033889	GPATCH3	93	42.094	Macaca_nemestrina
ENSXCOG00000016129	gpatch3	97	51.992	ENSMLEG00000033364	GPATCH3	95	51.992	Mandrillus_leucophaeus
ENSXCOG00000016129	gpatch3	100	70.059	ENSMAMG00000023975	gpatch3	100	70.450	Mastacembelus_armatus
ENSXCOG00000016129	gpatch3	100	70.817	ENSMZEG00005019731	gpatch3	99	71.595	Maylandia_zebra
ENSXCOG00000016129	gpatch3	72	63.717	ENSMGAG00000000813	GPATCH3	92	63.717	Meleagris_gallopavo
ENSXCOG00000016129	gpatch3	95	52.113	ENSMAUG00000002005	Gpatch3	94	52.113	Mesocricetus_auratus
ENSXCOG00000016129	gpatch3	97	51.497	ENSMICG00000015656	GPATCH3	95	51.497	Microcebus_murinus
ENSXCOG00000016129	gpatch3	95	52.834	ENSMOCG00000022375	Gpatch3	94	52.834	Microtus_ochrogaster
ENSXCOG00000016129	gpatch3	74	79.762	ENSMMOG00000008963	gpatch3	97	79.525	Mola_mola
ENSXCOG00000016129	gpatch3	98	51.389	ENSMODG00000014417	GPATCH3	94	51.786	Monodelphis_domestica
ENSXCOG00000016129	gpatch3	100	70.370	ENSMALG00000007586	gpatch3	100	70.760	Monopterus_albus
ENSXCOG00000016129	gpatch3	95	53.036	MGP_CAROLIEiJ_G0026594	Gpatch3	94	53.036	Mus_caroli
ENSXCOG00000016129	gpatch3	95	52.121	ENSMUSG00000028850	Gpatch3	94	52.323	Mus_musculus
ENSXCOG00000016129	gpatch3	95	53.593	MGP_PahariEiJ_G0028927	Gpatch3	94	53.593	Mus_pahari
ENSXCOG00000016129	gpatch3	95	52.024	MGP_SPRETEiJ_G0027575	Gpatch3	99	59.524	Mus_spretus
ENSXCOG00000016129	gpatch3	97	51.509	ENSMPUG00000015665	GPATCH3	95	52.515	Mustela_putorius_furo
ENSXCOG00000016129	gpatch3	95	53.704	ENSMLUG00000023528	GPATCH3	95	53.036	Myotis_lucifugus
ENSXCOG00000016129	gpatch3	97	51.297	ENSNGAG00000006821	Gpatch3	95	51.297	Nannospalax_galili
ENSXCOG00000016129	gpatch3	100	68.826	ENSNBRG00000000365	gpatch3	99	69.028	Neolamprologus_brichardi
ENSXCOG00000016129	gpatch3	89	50.968	ENSNLEG00000009387	GPATCH3	92	51.398	Nomascus_leucogenys
ENSXCOG00000016129	gpatch3	98	53.012	ENSMEUG00000003236	GPATCH3	94	52.610	Notamacropus_eugenii
ENSXCOG00000016129	gpatch3	97	52.941	ENSOPRG00000016429	GPATCH3	95	52.941	Ochotona_princeps
ENSXCOG00000016129	gpatch3	97	52.738	ENSODEG00000003292	GPATCH3	95	53.239	Octodon_degus
ENSXCOG00000016129	gpatch3	100	71.739	ENSONIG00000006771	gpatch3	99	72.925	Oreochromis_niloticus
ENSXCOG00000016129	gpatch3	85	53.196	ENSOCUG00000006411	GPATCH3	95	52.466	Oryctolagus_cuniculus
ENSXCOG00000016129	gpatch3	100	67.118	ENSORLG00000004435	gpatch3	100	67.311	Oryzias_latipes
ENSXCOG00000016129	gpatch3	100	66.031	ENSORLG00020022609	gpatch3	100	66.031	Oryzias_latipes_hni
ENSXCOG00000016129	gpatch3	98	86.486	ENSORLG00015008692	gpatch3	94	83.062	Oryzias_latipes_hsok
ENSXCOG00000016129	gpatch3	100	68.885	ENSOMEG00000010991	gpatch3	100	68.885	Oryzias_melastigma
ENSXCOG00000016129	gpatch3	97	51.394	ENSOGAG00000011647	GPATCH3	96	51.394	Otolemur_garnettii
ENSXCOG00000016129	gpatch3	97	52.121	ENSOARG00000003955	GPATCH3	93	52.121	Ovis_aries
ENSXCOG00000016129	gpatch3	97	50.797	ENSPPAG00000032902	GPATCH3	95	50.797	Pan_paniscus
ENSXCOG00000016129	gpatch3	97	52.610	ENSPPRG00000024244	GPATCH3	96	52.610	Panthera_pardus
ENSXCOG00000016129	gpatch3	97	51.881	ENSPTIG00000014693	GPATCH3	96	51.881	Panthera_tigris_altaica
ENSXCOG00000016129	gpatch3	97	50.996	ENSPTRG00000023419	GPATCH3	95	50.996	Pan_troglodytes
ENSXCOG00000016129	gpatch3	97	51.394	ENSPANG00000007984	GPATCH3	95	51.394	Papio_anubis
ENSXCOG00000016129	gpatch3	99	62.076	ENSPKIG00000020073	gpatch3	97	62.076	Paramormyrops_kingsleyae
ENSXCOG00000016129	gpatch3	82	58.883	ENSPSIG00000017160	GPATCH3	94	59.747	Pelodiscus_sinensis
ENSXCOG00000016129	gpatch3	100	67.787	ENSPMGG00000001703	gpatch3	100	68.119	Periophthalmus_magnuspinnatus
ENSXCOG00000016129	gpatch3	95	52.632	ENSPEMG00000020632	Gpatch3	94	52.632	Peromyscus_maniculatus_bairdii
ENSXCOG00000016129	gpatch3	97	52.929	ENSPCIG00000012681	GPATCH3	94	53.535	Phascolarctos_cinereus
ENSXCOG00000016129	gpatch3	100	82.874	ENSPFOG00000009928	gpatch3	100	82.874	Poecilia_formosa
ENSXCOG00000016129	gpatch3	100	81.274	ENSPLAG00000023784	gpatch3	100	81.274	Poecilia_latipinna
ENSXCOG00000016129	gpatch3	100	81.081	ENSPMEG00000010268	gpatch3	100	81.081	Poecilia_mexicana
ENSXCOG00000016129	gpatch3	99	83.910	ENSPREG00000008873	gpatch3	99	83.910	Poecilia_reticulata
ENSXCOG00000016129	gpatch3	97	51.394	ENSPPYG00000001675	GPATCH3	95	51.594	Pongo_abelii
ENSXCOG00000016129	gpatch3	95	51.220	ENSPCAG00000008286	GPATCH3	94	51.220	Procavia_capensis
ENSXCOG00000016129	gpatch3	97	51.793	ENSPCOG00000020145	GPATCH3	95	51.793	Propithecus_coquereli
ENSXCOG00000016129	gpatch3	97	50.902	ENSPVAG00000017282	GPATCH3	95	50.902	Pteropus_vampyrus
ENSXCOG00000016129	gpatch3	98	70.495	ENSPNYG00000005172	gpatch3	100	71.287	Pundamilia_nyererei
ENSXCOG00000016129	gpatch3	99	59.004	ENSPNAG00000018501	gpatch3	99	59.579	Pygocentrus_nattereri
ENSXCOG00000016129	gpatch3	95	53.360	ENSRNOG00000007097	Gpatch3	94	53.360	Rattus_norvegicus
ENSXCOG00000016129	gpatch3	97	51.394	ENSRBIG00000005853	GPATCH3	95	51.394	Rhinopithecus_bieti
ENSXCOG00000016129	gpatch3	97	51.195	ENSRROG00000038382	GPATCH3	95	51.195	Rhinopithecus_roxellana
ENSXCOG00000016129	gpatch3	95	51.619	ENSSBOG00000019680	GPATCH3	94	62.315	Saimiri_boliviensis_boliviensis
ENSXCOG00000016129	gpatch3	92	61.224	ENSSHAG00000014268	GPATCH3	93	51.703	Sarcophilus_harrisii
ENSXCOG00000016129	gpatch3	98	75.000	ENSSFOG00015009602	gpatch3	88	75.000	Scleropages_formosus
ENSXCOG00000016129	gpatch3	100	69.066	ENSSMAG00000002067	gpatch3	100	69.066	Scophthalmus_maximus
ENSXCOG00000016129	gpatch3	100	71.094	ENSSDUG00000017071	gpatch3	100	71.484	Seriola_dumerili
ENSXCOG00000016129	gpatch3	100	71.484	ENSSLDG00000016549	gpatch3	100	71.875	Seriola_lalandi_dorsalis
ENSXCOG00000016129	gpatch3	96	56.803	ENSSPUG00000018299	GPATCH3	94	56.681	Sphenodon_punctatus
ENSXCOG00000016129	gpatch3	100	72.287	ENSSPAG00000013046	gpatch3	100	72.287	Stegastes_partitus
ENSXCOG00000016129	gpatch3	97	52.716	ENSSSCG00000003564	GPATCH3	93	52.918	Sus_scrofa
ENSXCOG00000016129	gpatch3	82	55.039	ENSTGUG00000000986	GPATCH3	96	56.331	Taeniopygia_guttata
ENSXCOG00000016129	gpatch3	100	66.284	ENSTRUG00000013294	gpatch3	100	66.284	Takifugu_rubripes
ENSXCOG00000016129	gpatch3	97	66.466	ENSTNIG00000009657	gpatch3	99	66.667	Tetraodon_nigroviridis
ENSXCOG00000016129	gpatch3	79	61.688	ENSTBEG00000002042	GPATCH3	79	61.688	Tupaia_belangeri
ENSXCOG00000016129	gpatch3	95	49.795	ENSTTRG00000016677	GPATCH3	94	49.795	Tursiops_truncatus
ENSXCOG00000016129	gpatch3	97	52.218	ENSUAMG00000026235	GPATCH3	95	52.218	Ursus_americanus
ENSXCOG00000016129	gpatch3	97	52.419	ENSUMAG00000011894	GPATCH3	95	52.419	Ursus_maritimus
ENSXCOG00000016129	gpatch3	97	53.333	ENSVVUG00000012041	GPATCH3	95	53.226	Vulpes_vulpes
ENSXCOG00000016129	gpatch3	97	53.863	ENSXETG00000030345	GPATCH3	100	53.448	Xenopus_tropicalis
ENSXCOG00000016129	gpatch3	100	83.658	ENSXMAG00000010749	gpatch3	100	83.658	Xiphophorus_maculatus