EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000016208 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3471 bases
Position: chrKQ557223.1:396066-399536
Accession: ZDB-GENE-060503-609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000021676	Ribosomal_S18	PF01084.20	1.8e-20	1	1
ENSXCOP00000021677	Ribosomal_S18	PF01084.20	3.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000021940	-	303	-	ENSXCOP00000021676	100 (aa)	-	-
ENSXCOT00000021941	-	444	-	ENSXCOP00000021677	147 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016208	mrps18c	89	80.899	ENSAPOG00000019045	mrps18c	100	63.566	Acanthochromis_polyacanthus
ENSXCOG00000016208	mrps18c	89	77.528	ENSACIG00000020253	mrps18c	91	75.000	Amphilophus_citrinellus
ENSXCOG00000016208	mrps18c	89	78.652	ENSAOCG00000014338	mrps18c	100	62.791	Amphiprion_ocellaris
ENSXCOG00000016208	mrps18c	89	78.652	ENSAPEG00000022956	mrps18c	100	62.791	Amphiprion_percula
ENSXCOG00000016208	mrps18c	87	79.310	ENSAPEG00000023068	-	87	76.087	Amphiprion_percula
ENSXCOG00000016208	mrps18c	89	77.528	ENSATEG00000023417	mrps18c	100	63.846	Anabas_testudineus
ENSXCOG00000016208	mrps18c	87	67.816	ENSAPLG00000012544	-	84	67.816	Anas_platyrhynchos
ENSXCOG00000016208	mrps18c	98	79.000	ENSACLG00000010521	mrps18c	98	79.000	Astatotilapia_calliptera
ENSXCOG00000016208	mrps18c	89	74.157	ENSAMXG00000012238	mrps18c	92	72.527	Astyanax_mexicanus
ENSXCOG00000016208	mrps18c	87	70.115	ENSCPBG00000007783	-	53	70.115	Chrysemys_picta_bellii
ENSXCOG00000016208	mrps18c	93	74.194	ENSCSEG00000000711	mrps18c	65	76.087	Cynoglossus_semilaevis
ENSXCOG00000016208	mrps18c	87	83.908	ENSCVAG00000020169	mrps18c	100	70.866	Cyprinodon_variegatus
ENSXCOG00000016208	mrps18c	87	72.414	ENSDARG00000069624	mrps18c	64	72.414	Danio_rerio
ENSXCOG00000016208	mrps18c	89	71.910	ENSELUG00000024603	mrps18c	67	71.910	Esox_lucius
ENSXCOG00000016208	mrps18c	87	86.207	ENSFHEG00000018752	-	100	73.438	Fundulus_heteroclitus
ENSXCOG00000016208	mrps18c	87	86.207	ENSFHEG00000015550	mrps18c	96	73.846	Fundulus_heteroclitus
ENSXCOG00000016208	mrps18c	87	68.966	ENSGALG00000023191	MRPS18C	60	68.966	Gallus_gallus
ENSXCOG00000016208	mrps18c	100	85.806	ENSGAFG00000008048	mrps18c	100	85.806	Gambusia_affinis
ENSXCOG00000016208	mrps18c	87	71.264	ENSGAGG00000015144	-	61	71.264	Gopherus_agassizii
ENSXCOG00000016208	mrps18c	89	84.270	ENSHBUG00000002008	mrps18c	100	64.615	Haplochromis_burtoni
ENSXCOG00000016208	mrps18c	89	80.899	ENSHCOG00000013161	mrps18c	90	65.546	Hippocampus_comes
ENSXCOG00000016208	mrps18c	89	67.416	ENSIPUG00000003783	mrps18c	86	67.416	Ictalurus_punctatus
ENSXCOG00000016208	mrps18c	87	81.609	ENSKMAG00000016467	mrps18c	100	67.969	Kryptolebias_marmoratus
ENSXCOG00000016208	mrps18c	89	77.528	ENSLBEG00000019174	mrps18c	100	61.538	Labrus_bergylta
ENSXCOG00000016208	mrps18c	89	77.528	ENSLBEG00000021861	mrps18c	100	61.538	Labrus_bergylta
ENSXCOG00000016208	mrps18c	87	68.966	ENSLACG00000011243	mrps18c	100	53.125	Latimeria_chalumnae
ENSXCOG00000016208	mrps18c	89	71.910	ENSLOCG00000012115	mrps18c	66	71.910	Lepisosteus_oculatus
ENSXCOG00000016208	mrps18c	87	79.310	ENSMAMG00000012386	mrps18c	100	59.701	Mastacembelus_armatus
ENSXCOG00000016208	mrps18c	89	84.270	ENSMZEG00005023278	mrps18c	100	64.615	Maylandia_zebra
ENSXCOG00000016208	mrps18c	87	81.609	ENSMMOG00000011316	mrps18c	71	79.570	Mola_mola
ENSXCOG00000016208	mrps18c	89	84.270	ENSNBRG00000006182	mrps18c	100	64.615	Neolamprologus_brichardi
ENSXCOG00000016208	mrps18c	87	66.667	ENSMEUG00000010972	-	69	66.667	Notamacropus_eugenii
ENSXCOG00000016208	mrps18c	89	83.146	ENSONIG00000012527	mrps18c	93	79.787	Oreochromis_niloticus
ENSXCOG00000016208	mrps18c	89	75.281	ENSORLG00015006869	mrps18c	100	61.240	Oryzias_latipes_hsok
ENSXCOG00000016208	mrps18c	89	73.034	ENSOMEG00000005009	mrps18c	86	73.034	Oryzias_melastigma
ENSXCOG00000016208	mrps18c	89	76.404	ENSPKIG00000021736	mrps18c	65	76.404	Paramormyrops_kingsleyae
ENSXCOG00000016208	mrps18c	88	77.273	ENSPMGG00000002991	mrps18c	97	73.196	Periophthalmus_magnuspinnatus
ENSXCOG00000016208	mrps18c	100	85.161	ENSPFOG00000002351	mrps18c	100	85.161	Poecilia_formosa
ENSXCOG00000016208	mrps18c	87	96.552	ENSPLAG00000015187	mrps18c	100	84.375	Poecilia_latipinna
ENSXCOG00000016208	mrps18c	100	85.806	ENSPMEG00000014488	mrps18c	100	85.806	Poecilia_mexicana
ENSXCOG00000016208	mrps18c	94	88.298	ENSPREG00000012593	mrps18c	90	94.318	Poecilia_reticulata
ENSXCOG00000016208	mrps18c	89	83.146	ENSPNYG00000010654	mrps18c	100	63.846	Pundamilia_nyererei
ENSXCOG00000016208	mrps18c	89	69.663	ENSPNAG00000009350	mrps18c	85	68.132	Pygocentrus_nattereri
ENSXCOG00000016208	mrps18c	89	76.404	ENSSFOG00015019444	mrps18c	100	56.618	Scleropages_formosus
ENSXCOG00000016208	mrps18c	89	77.528	ENSSDUG00000015676	mrps18c	100	61.719	Seriola_dumerili
ENSXCOG00000016208	mrps18c	89	78.652	ENSSLDG00000002034	mrps18c	91	64.957	Seriola_lalandi_dorsalis
ENSXCOG00000016208	mrps18c	85	63.529	ENSSPUG00000013990	-	62	63.529	Sphenodon_punctatus
ENSXCOG00000016208	mrps18c	88	78.409	ENSSPAG00000008687	mrps18c	99	61.719	Stegastes_partitus
ENSXCOG00000016208	mrps18c	89	70.787	ENSTRUG00000024403	mrps18c	100	56.923	Takifugu_rubripes
ENSXCOG00000016208	mrps18c	89	73.034	ENSTNIG00000005674	mrps18c	100	58.462	Tetraodon_nigroviridis
ENSXCOG00000016208	mrps18c	84	69.048	ENSXETG00000027597	mrps18c	85	54.464	Xenopus_tropicalis
ENSXCOG00000016208	mrps18c	100	90.968	ENSXMAG00000012555	mrps18c	100	90.968	Xiphophorus_maculatus