EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000016368 (Gene tree)
Gene ID: -
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB-binding 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 8288 bases
Position: chrKQ557208.1:16176807-16185094
Accession: ZDB-GENE-050522-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000021913	RRM_1	PF00076.22	1.1e-29	1	2
ENSXCOP00000021913	RRM_1	PF00076.22	1.1e-29	2	2
ENSXCOP00000021911	RRM_1	PF00076.22	1.2e-29	1	2
ENSXCOP00000021911	RRM_1	PF00076.22	1.2e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000022178	-	2232	-	ENSXCOP00000021911	743 (aa)	-	-
ENSXCOT00000022180	-	2208	-	ENSXCOP00000021913	735 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016368's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016368	raver1	94	50.870	ENSG00000161847	RAVER1	99	51.206	Homo_sapiens
ENSXCOG00000016368	raver1	98	83.032	ENSAPOG00000017267	raver1	92	82.650	Acanthochromis_polyacanthus
ENSXCOG00000016368	raver1	80	56.566	ENSAMEG00000011738	RAVER1	97	49.801	Ailuropoda_melanoleuca
ENSXCOG00000016368	raver1	98	83.983	ENSAOCG00000005128	raver1	97	83.584	Amphiprion_ocellaris
ENSXCOG00000016368	raver1	98	83.956	ENSAPEG00000010854	raver1	100	83.560	Amphiprion_percula
ENSXCOG00000016368	raver1	98	81.328	ENSATEG00000021004	raver1	100	80.978	Anabas_testudineus
ENSXCOG00000016368	raver1	79	49.035	ENSACAG00000008386	-	91	48.819	Anolis_carolinensis
ENSXCOG00000016368	raver1	80	59.223	ENSANAG00000028226	RAVER1	97	50.996	Aotus_nancymaae
ENSXCOG00000016368	raver1	100	80.868	ENSACLG00000018492	raver1	95	80.868	Astatotilapia_calliptera
ENSXCOG00000016368	raver1	97	66.120	ENSAMXG00000005132	raver1	100	64.714	Astyanax_mexicanus
ENSXCOG00000016368	raver1	94	50.980	ENSBTAG00000015721	RAVER1	99	52.257	Bos_taurus
ENSXCOG00000016368	raver1	71	62.642	ENSCJAG00000005671	RAVER1	97	50.802	Callithrix_jacchus
ENSXCOG00000016368	raver1	94	50.763	ENSCAFG00000017861	RAVER1	97	52.006	Canis_familiaris
ENSXCOG00000016368	raver1	94	50.763	ENSCAFG00020024449	RAVER1	99	52.006	Canis_lupus_dingo
ENSXCOG00000016368	raver1	69	65.311	ENSCHIG00000006718	RAVER1	99	51.344	Capra_hircus
ENSXCOG00000016368	raver1	61	68.508	ENSTSYG00000027107	RAVER1	72	68.508	Carlito_syrichta
ENSXCOG00000016368	raver1	60	67.714	ENSCAPG00000002269	RAVER1	100	50.363	Cavia_aperea
ENSXCOG00000016368	raver1	91	51.046	ENSCPOG00000001008	RAVER1	99	50.467	Cavia_porcellus
ENSXCOG00000016368	raver1	73	61.572	ENSCCAG00000031723	RAVER1	97	51.004	Cebus_capucinus
ENSXCOG00000016368	raver1	94	48.537	ENSCATG00000043863	RAVER1	97	51.409	Cercocebus_atys
ENSXCOG00000016368	raver1	68	64.183	ENSCLAG00000009336	RAVER1	99	48.942	Chinchilla_lanigera
ENSXCOG00000016368	raver1	93	51.084	ENSCSAG00000007317	RAVER1	82	51.827	Chlorocebus_sabaeus
ENSXCOG00000016368	raver1	92	50.870	ENSCPBG00000005349	-	97	50.730	Chrysemys_picta_bellii
ENSXCOG00000016368	raver1	80	59.449	ENSCANG00000008337	RAVER1	97	51.409	Colobus_angolensis_palliatus
ENSXCOG00000016368	raver1	77	60.606	ENSCGRG00001013260	-	99	51.471	Cricetulus_griseus_chok1gshd
ENSXCOG00000016368	raver1	77	60.606	ENSCGRG00000015138	-	99	51.471	Cricetulus_griseus_crigri
ENSXCOG00000016368	raver1	98	73.764	ENSCSEG00000021092	raver1	100	73.414	Cynoglossus_semilaevis
ENSXCOG00000016368	raver1	100	86.549	ENSCVAG00000013971	raver1	100	86.549	Cyprinodon_variegatus
ENSXCOG00000016368	raver1	98	67.127	ENSDARG00000052617	raver1	100	65.400	Danio_rerio
ENSXCOG00000016368	raver1	57	61.890	ENSDNOG00000035742	-	58	59.770	Dasypus_novemcinctus
ENSXCOG00000016368	raver1	61	65.205	ENSDORG00000010106	-	96	46.995	Dipodomys_ordii
ENSXCOG00000016368	raver1	53	65.909	ENSEASG00005010544	-	72	65.909	Equus_asinus_asinus
ENSXCOG00000016368	raver1	69	65.072	ENSECAG00000024966	RAVER1	79	58.333	Equus_caballus
ENSXCOG00000016368	raver1	98	72.690	ENSELUG00000023287	raver1	100	72.358	Esox_lucius
ENSXCOG00000016368	raver1	68	66.262	ENSFCAG00000009435	RAVER1	95	50.200	Felis_catus
ENSXCOG00000016368	raver1	90	49.589	ENSFDAG00000015113	RAVER1	99	50.399	Fukomys_damarensis
ENSXCOG00000016368	raver1	93	69.155	ENSGMOG00000003649	raver1	98	69.859	Gadus_morhua
ENSXCOG00000016368	raver1	64	38.302	ENSGALG00000050608	-	51	37.654	Gallus_gallus
ENSXCOG00000016368	raver1	100	96.190	ENSGAFG00000015944	raver1	100	96.190	Gambusia_affinis
ENSXCOG00000016368	raver1	94	70.068	ENSGACG00000013818	raver1	100	71.448	Gasterosteus_aculeatus
ENSXCOG00000016368	raver1	80	66.935	ENSGAGG00000011748	-	99	65.722	Gopherus_agassizii
ENSXCOG00000016368	raver1	94	50.736	ENSGGOG00000006015	RAVER1	97	51.340	Gorilla_gorilla
ENSXCOG00000016368	raver1	99	80.738	ENSHBUG00000021210	raver1	100	75.034	Haplochromis_burtoni
ENSXCOG00000016368	raver1	77	59.875	ENSHGLG00000015460	RAVER1	82	59.800	Heterocephalus_glaber_female
ENSXCOG00000016368	raver1	77	59.875	ENSHGLG00100000812	RAVER1	82	59.800	Heterocephalus_glaber_male
ENSXCOG00000016368	raver1	100	71.854	ENSHCOG00000000449	raver1	98	73.171	Hippocampus_comes
ENSXCOG00000016368	raver1	98	66.851	ENSIPUG00000013153	raver1	100	67.436	Ictalurus_punctatus
ENSXCOG00000016368	raver1	93	50.068	ENSSTOG00000003241	RAVER1	98	51.421	Ictidomys_tridecemlineatus
ENSXCOG00000016368	raver1	70	62.615	ENSJJAG00000018219	-	99	50.601	Jaculus_jaculus
ENSXCOG00000016368	raver1	100	79.348	ENSKMAG00000017355	raver1	100	79.348	Kryptolebias_marmoratus
ENSXCOG00000016368	raver1	93	80.470	ENSLBEG00000008268	raver1	96	80.470	Labrus_bergylta
ENSXCOG00000016368	raver1	85	48.559	ENSLACG00000005809	-	99	49.424	Latimeria_chalumnae
ENSXCOG00000016368	raver1	98	60.078	ENSLOCG00000007500	raver1	100	60.102	Lepisosteus_oculatus
ENSXCOG00000016368	raver1	94	50.200	ENSLAFG00000003664	-	95	60.000	Loxodonta_africana
ENSXCOG00000016368	raver1	93	51.081	ENSMFAG00000037977	RAVER1	95	52.097	Macaca_fascicularis
ENSXCOG00000016368	raver1	93	51.220	ENSMMUG00000014897	RAVER1	95	51.827	Macaca_mulatta
ENSXCOG00000016368	raver1	93	51.220	ENSMNEG00000028390	RAVER1	95	51.827	Macaca_nemestrina
ENSXCOG00000016368	raver1	94	50.941	ENSMLEG00000041959	RAVER1	97	51.544	Mandrillus_leucophaeus
ENSXCOG00000016368	raver1	98	81.189	ENSMAMG00000012059	raver1	100	80.707	Mastacembelus_armatus
ENSXCOG00000016368	raver1	100	80.868	ENSMZEG00005019002	raver1	100	80.868	Maylandia_zebra
ENSXCOG00000016368	raver1	77	60.606	ENSMAUG00000017948	-	99	51.544	Mesocricetus_auratus
ENSXCOG00000016368	raver1	94	51.189	ENSMICG00000010326	RAVER1	99	52.587	Microcebus_murinus
ENSXCOG00000016368	raver1	77	60.606	ENSMOCG00000015553	-	99	51.478	Microtus_ochrogaster
ENSXCOG00000016368	raver1	98	81.051	ENSMMOG00000012093	raver1	100	80.571	Mola_mola
ENSXCOG00000016368	raver1	90	49.928	ENSMODG00000005584	-	88	50.935	Monodelphis_domestica
ENSXCOG00000016368	raver1	100	76.798	ENSMALG00000016569	raver1	100	78.562	Monopterus_albus
ENSXCOG00000016368	raver1	80	61.616	MGP_CAROLIEiJ_G0031860	-	99	51.061	Mus_caroli
ENSXCOG00000016368	raver1	68	63.462	ENSMUSG00000010205	Raver1	99	50.663	Mus_musculus
ENSXCOG00000016368	raver1	68	63.636	MGP_PahariEiJ_G0014726	-	99	50.526	Mus_pahari
ENSXCOG00000016368	raver1	77	60.606	MGP_SPRETEiJ_G0032984	-	99	50.531	Mus_spretus
ENSXCOG00000016368	raver1	91	49.864	ENSMPUG00000006712	RAVER1	96	50.875	Mustela_putorius_furo
ENSXCOG00000016368	raver1	71	62.077	ENSMLUG00000012328	RAVER1	99	52.180	Myotis_lucifugus
ENSXCOG00000016368	raver1	77	58.586	ENSNGAG00000001260	-	99	49.933	Nannospalax_galili
ENSXCOG00000016368	raver1	100	72.592	ENSNBRG00000010139	raver1	100	72.049	Neolamprologus_brichardi
ENSXCOG00000016368	raver1	80	59.055	ENSNLEG00000012181	RAVER1	97	51.141	Nomascus_leucogenys
ENSXCOG00000016368	raver1	77	58.499	ENSMEUG00000003281	-	86	58.499	Notamacropus_eugenii
ENSXCOG00000016368	raver1	62	78.846	ENSODEG00000016260	RAVER1	99	49.198	Octodon_degus
ENSXCOG00000016368	raver1	92	79.063	ENSONIG00000001559	raver1	100	79.063	Oreochromis_niloticus
ENSXCOG00000016368	raver1	94	50.271	ENSOCUG00000020918	RAVER1	99	50.206	Oryctolagus_cuniculus
ENSXCOG00000016368	raver1	100	77.989	ENSORLG00000005458	raver1	100	77.989	Oryzias_latipes
ENSXCOG00000016368	raver1	100	78.397	ENSORLG00020004392	raver1	100	78.397	Oryzias_latipes_hni
ENSXCOG00000016368	raver1	100	78.668	ENSORLG00015017222	raver1	100	78.668	Oryzias_latipes_hsok
ENSXCOG00000016368	raver1	99	78.261	ENSOMEG00000023956	raver1	100	78.261	Oryzias_melastigma
ENSXCOG00000016368	raver1	94	50.271	ENSOGAG00000011071	RAVER1	97	51.220	Otolemur_garnettii
ENSXCOG00000016368	raver1	65	78.846	ENSOARG00000015886	RAVER1	97	48.865	Ovis_aries
ENSXCOG00000016368	raver1	94	50.870	ENSPPAG00000002611	RAVER1	97	51.206	Pan_paniscus
ENSXCOG00000016368	raver1	68	66.262	ENSPPRG00000009912	RAVER1	95	50.336	Panthera_pardus
ENSXCOG00000016368	raver1	94	50.870	ENSPTRG00000010466	RAVER1	97	51.206	Pan_troglodytes
ENSXCOG00000016368	raver1	94	50.875	ENSPANG00000004122	RAVER1	97	51.206	Papio_anubis
ENSXCOG00000016368	raver1	68	62.981	ENSPEMG00000016411	-	80	60.606	Peromyscus_maniculatus_bairdii
ENSXCOG00000016368	raver1	94	51.515	ENSPCIG00000018695	-	99	52.609	Phascolarctos_cinereus
ENSXCOG00000016368	raver1	100	90.094	ENSPFOG00000007016	raver1	100	91.968	Poecilia_formosa
ENSXCOG00000016368	raver1	95	92.407	ENSPLAG00000020793	raver1	99	92.407	Poecilia_latipinna
ENSXCOG00000016368	raver1	100	94.014	ENSPMEG00000011220	raver1	100	94.014	Poecilia_mexicana
ENSXCOG00000016368	raver1	100	87.619	ENSPREG00000006864	raver1	100	87.619	Poecilia_reticulata
ENSXCOG00000016368	raver1	80	60.355	ENSPPYG00000010514	RAVER1	83	52.291	Pongo_abelii
ENSXCOG00000016368	raver1	94	50.403	ENSPCOG00000026605	RAVER1	97	50.459	Propithecus_coquereli
ENSXCOG00000016368	raver1	62	78.846	ENSPVAG00000003689	RAVER1	99	51.150	Pteropus_vampyrus
ENSXCOG00000016368	raver1	100	75.951	ENSPNYG00000013284	raver1	100	75.543	Pundamilia_nyererei
ENSXCOG00000016368	raver1	98	68.349	ENSPNAG00000015476	raver1	100	67.426	Pygocentrus_nattereri
ENSXCOG00000016368	raver1	91	50.272	ENSRNOG00000020710	Raver1	99	51.798	Rattus_norvegicus
ENSXCOG00000016368	raver1	94	52.282	ENSRBIG00000034702	RAVER1	97	52.407	Rhinopithecus_bieti
ENSXCOG00000016368	raver1	94	51.653	ENSRROG00000031186	RAVER1	97	52.000	Rhinopithecus_roxellana
ENSXCOG00000016368	raver1	94	51.144	ENSSBOG00000023423	RAVER1	97	52.198	Saimiri_boliviensis_boliviensis
ENSXCOG00000016368	raver1	85	51.598	ENSSHAG00000008181	-	90	52.599	Sarcophilus_harrisii
ENSXCOG00000016368	raver1	98	82.873	ENSSMAG00000004546	raver1	100	82.361	Scophthalmus_maximus
ENSXCOG00000016368	raver1	98	84.647	ENSSDUG00000021063	raver1	100	84.103	Seriola_dumerili
ENSXCOG00000016368	raver1	98	84.647	ENSSLDG00000014505	raver1	100	84.103	Seriola_lalandi_dorsalis
ENSXCOG00000016368	raver1	98	84.924	ENSSPAG00000000688	raver1	100	84.511	Stegastes_partitus
ENSXCOG00000016368	raver1	94	50.203	ENSSSCG00000013650	-	99	51.781	Sus_scrofa
ENSXCOG00000016368	raver1	98	75.829	ENSTRUG00000025641	raver1	100	75.441	Takifugu_rubripes
ENSXCOG00000016368	raver1	94	49.932	ENSTTRG00000009552	RAVER1	99	50.467	Tursiops_truncatus
ENSXCOG00000016368	raver1	69	65.311	ENSUAMG00000020385	RAVER1	97	51.075	Ursus_americanus
ENSXCOG00000016368	raver1	94	50.763	ENSVVUG00000028976	RAVER1	97	52.006	Vulpes_vulpes
ENSXCOG00000016368	raver1	90	50.644	ENSXETG00000011622	raver1	100	46.976	Xenopus_tropicalis
ENSXCOG00000016368	raver1	100	99.728	ENSXMAG00000000217	raver1	100	99.728	Xiphophorus_maculatus