EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000016370 (Gene tree)
Gene ID: -
Gene Symbol: RAB29
Alias: RAB7L|RAB7L1
Full Name: RAB29%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3907 bases
Position: chrKQ557201.1:27447328-27451234
Accession: 9789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000021906	MMR_HSR1	PF01926.23	4.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000022173	RAB29-201	621	-	ENSXCOP00000021906	206 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000016370	RAB29	86	33.708	ENSXCOG00000019921	rab7a	86	33.708
ENSXCOG00000016370	RAB29	88	35.326	ENSXCOG00000019533	rab13	94	35.326
ENSXCOG00000016370	RAB29	98	33.333	ENSXCOG00000009190	-	94	33.333
ENSXCOG00000016370	RAB29	62	35.433	ENSXCOG00000009194	-	90	35.433
ENSXCOG00000016370	RAB29	99	33.023	ENSXCOG00000004226	rab11al	95	33.023
ENSXCOG00000016370	RAB29	82	35.294	ENSXCOG00000013842	rab1ab	81	35.294
ENSXCOG00000016370	RAB29	75	36.709	ENSXCOG00000018683	zgc:101559	65	36.709
ENSXCOG00000016370	RAB29	91	31.122	ENSXCOG00000006259	rab6a	89	31.122
ENSXCOG00000016370	RAB29	98	30.542	ENSXCOG00000015802	RAB41	91	30.542
ENSXCOG00000016370	RAB29	75	35.032	ENSXCOG00000011864	rab23	70	36.047
ENSXCOG00000016370	RAB29	82	31.977	ENSXCOG00000008410	si:dkey-34d22.5	76	31.977
ENSXCOG00000016370	RAB29	98	32.864	ENSXCOG00000008042	-	94	32.864
ENSXCOG00000016370	RAB29	97	35.071	ENSXCOG00000019310	rab12	82	35.071
ENSXCOG00000016370	RAB29	56	35.043	ENSXCOG00000003192	-	53	35.043
ENSXCOG00000016370	RAB29	98	34.653	ENSXCOG00000019054	rab9a	89	34.653
ENSXCOG00000016370	RAB29	54	31.250	ENSXCOG00000004543	arl8bb	70	31.250
ENSXCOG00000016370	RAB29	82	33.136	ENSXCOG00000010695	zgc:171927	80	33.136
ENSXCOG00000016370	RAB29	81	30.357	ENSXCOG00000016452	rab22a	83	30.357
ENSXCOG00000016370	RAB29	54	33.036	ENSXCOG00000016886	arl8a	58	33.036
ENSXCOG00000016370	RAB29	98	34.158	ENSXCOG00000009094	rab9b	97	34.158
ENSXCOG00000016370	RAB29	73	38.608	ENSXCOG00000012032	-	70	38.608
ENSXCOG00000016370	RAB29	95	31.000	ENSXCOG00000013344	rab33a	70	31.000
ENSXCOG00000016370	RAB29	59	31.452	ENSXCOG00000019281	rheb	64	31.452
ENSXCOG00000016370	RAB29	82	34.483	ENSXCOG00000010770	-	66	34.483
ENSXCOG00000016370	RAB29	87	32.044	ENSXCOG00000002232	rab6bb	83	32.044
ENSXCOG00000016370	RAB29	83	36.257	ENSXCOG00000020575	RAB9A	77	36.257
ENSXCOG00000016370	RAB29	81	32.934	ENSXCOG00000016788	rab5c	83	31.122
ENSXCOG00000016370	RAB29	82	30.588	ENSXCOG00000020125	rab25a	89	30.882
ENSXCOG00000016370	RAB29	81	32.934	ENSXCOG00000020121	rab5aa	75	32.934
ENSXCOG00000016370	RAB29	61	39.370	ENSXCOG00000000469	rab33ba	51	39.370
ENSXCOG00000016370	RAB29	89	32.973	ENSXCOG00000006807	rab39bb	85	32.973
ENSXCOG00000016370	RAB29	84	36.000	ENSXCOG00000001357	rab11a	65	36.000
ENSXCOG00000016370	RAB29	83	34.682	ENSXCOG00000003428	rab42a	78	34.682

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016370	RAB29	100	73.301	ENSATEG00000024739	RAB29	100	73.301	Anabas_testudineus
ENSXCOG00000016370	RAB29	80	80.606	ENSACLG00000008602	RAB29	100	80.606	Astatotilapia_calliptera
ENSXCOG00000016370	RAB29	100	76.699	ENSCVAG00000014038	RAB29	100	76.699	Cyprinodon_variegatus
ENSXCOG00000016370	RAB29	82	53.571	ENSEBUG00000002259	RAB29	81	53.571	Eptatretus_burgeri
ENSXCOG00000016370	RAB29	87	73.889	ENSFHEG00000015993	RAB29	88	73.889	Fundulus_heteroclitus
ENSXCOG00000016370	RAB29	80	72.561	ENSGMOG00000018475	RAB29	99	72.561	Gadus_morhua
ENSXCOG00000016370	RAB29	100	90.291	ENSGAFG00000000629	RAB29	100	90.291	Gambusia_affinis
ENSXCOG00000016370	RAB29	100	68.447	ENSGACG00000010473	RAB29	99	68.447	Gasterosteus_aculeatus
ENSXCOG00000016370	RAB29	100	74.038	ENSHBUG00000012594	RAB29	100	74.038	Haplochromis_burtoni
ENSXCOG00000016370	RAB29	97	72.500	ENSKMAG00000017150	-	90	72.500	Kryptolebias_marmoratus
ENSXCOG00000016370	RAB29	100	71.359	ENSLBEG00000006152	-	100	71.359	Labrus_bergylta
ENSXCOG00000016370	RAB29	100	71.359	ENSLBEG00000018812	RAB29	100	71.359	Labrus_bergylta
ENSXCOG00000016370	RAB29	99	51.961	ENSLACG00000002523	RAB29	98	51.961	Latimeria_chalumnae
ENSXCOG00000016370	RAB29	100	72.816	ENSMAMG00000006963	RAB29	100	72.816	Mastacembelus_armatus
ENSXCOG00000016370	RAB29	100	73.077	ENSMZEG00005026799	RAB29	100	73.077	Maylandia_zebra
ENSXCOG00000016370	RAB29	99	75.000	ENSMALG00000018436	RAB29	89	75.000	Monopterus_albus
ENSXCOG00000016370	RAB29	81	78.443	ENSNBRG00000008714	RAB29	73	78.443	Neolamprologus_brichardi
ENSXCOG00000016370	RAB29	100	73.558	ENSONIG00000014892	RAB29	100	73.558	Oreochromis_niloticus
ENSXCOG00000016370	RAB29	100	70.388	ENSORLG00000027892	RAB29	100	70.388	Oryzias_latipes
ENSXCOG00000016370	RAB29	100	68.447	ENSORLG00020005240	RAB29	100	68.447	Oryzias_latipes_hni
ENSXCOG00000016370	RAB29	100	69.417	ENSORLG00015020441	-	100	69.417	Oryzias_latipes_hsok
ENSXCOG00000016370	RAB29	100	70.874	ENSOMEG00000000336	RAB29	100	70.874	Oryzias_melastigma
ENSXCOG00000016370	RAB29	100	67.476	ENSPMGG00000008290	-	100	67.476	Periophthalmus_magnuspinnatus
ENSXCOG00000016370	RAB29	100	84.466	ENSPFOG00000013066	RAB29	99	84.466	Poecilia_formosa
ENSXCOG00000016370	RAB29	100	82.524	ENSPLAG00000002600	RAB29	97	82.524	Poecilia_latipinna
ENSXCOG00000016370	RAB29	100	84.951	ENSPMEG00000021807	RAB29	100	84.951	Poecilia_mexicana
ENSXCOG00000016370	RAB29	100	85.437	ENSPREG00000020276	RAB29	100	85.437	Poecilia_reticulata
ENSXCOG00000016370	RAB29	100	73.077	ENSPNYG00000015355	RAB29	100	73.077	Pundamilia_nyererei
ENSXCOG00000016370	RAB29	100	70.531	ENSSDUG00000006543	RAB29	100	70.531	Seriola_dumerili
ENSXCOG00000016370	RAB29	99	49.510	ENSSPUG00000015007	RAB29	98	49.510	Sphenodon_punctatus
ENSXCOG00000016370	RAB29	100	72.330	ENSSPAG00000002062	RAB29	100	72.330	Stegastes_partitus
ENSXCOG00000016370	RAB29	100	97.573	ENSXMAG00000029823	RAB29	100	97.573	Xiphophorus_maculatus