EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000016436 (Gene tree)
Gene ID: -
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 2
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 13181 bases
Position: chrKQ557216.1:8300350-8313530
Accession: ZDB-GENE-031118-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000022032	RRM_1	PF00076.22	7.9e-25	1	1
ENSXCOP00000022028	RRM_1	PF00076.22	1.1e-24	1	1
ENSXCOP00000022034	RRM_1	PF00076.22	2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000022295	-	1527	-	ENSXCOP00000022028	508 (aa)	-	-
ENSXCOT00000022299	-	1245	-	ENSXCOP00000022032	414 (aa)	-	-
ENSXCOT00000022301	-	882	-	ENSXCOP00000022034	293 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016436's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016436	cstf2	84	96.970	ENSG00000101811	CSTF2	75	94.675	Homo_sapiens
ENSXCOG00000016436	cstf2	98	94.186	ENSAPOG00000005630	cstf2	96	70.833	Acanthochromis_polyacanthus
ENSXCOG00000016436	cstf2	84	96.970	ENSAMEG00000002082	CSTF2	86	76.707	Ailuropoda_melanoleuca
ENSXCOG00000016436	cstf2	96	67.429	ENSACIG00000012852	cstf2	75	98.485	Amphilophus_citrinellus
ENSXCOG00000016436	cstf2	100	95.294	ENSAOCG00000020905	cstf2	96	71.591	Amphiprion_ocellaris
ENSXCOG00000016436	cstf2	100	95.294	ENSAPEG00000006526	cstf2	96	71.591	Amphiprion_percula
ENSXCOG00000016436	cstf2	100	95.294	ENSATEG00000018186	cstf2	68	98.485	Anabas_testudineus
ENSXCOG00000016436	cstf2	58	96.226	ENSAPLG00000007255	CSTF2	60	75.745	Anas_platyrhynchos
ENSXCOG00000016436	cstf2	84	96.970	ENSANAG00000022342	CSTF2	88	76.829	Aotus_nancymaae
ENSXCOG00000016436	cstf2	100	94.118	ENSACLG00000000779	cstf2	71	98.485	Astatotilapia_calliptera
ENSXCOG00000016436	cstf2	92	98.485	ENSAMXG00000021477	cstf2	96	100.000	Astyanax_mexicanus
ENSXCOG00000016436	cstf2	84	96.970	ENSBTAG00000003547	CSTF2	79	85.238	Bos_taurus
ENSXCOG00000016436	cstf2	91	96.970	ENSCJAG00000004422	CSTF2	88	76.829	Callithrix_jacchus
ENSXCOG00000016436	cstf2	84	96.970	ENSCAFG00000017551	CSTF2	99	56.326	Canis_familiaris
ENSXCOG00000016436	cstf2	84	96.970	ENSCAFG00020007619	CSTF2	86	76.400	Canis_lupus_dingo
ENSXCOG00000016436	cstf2	84	96.970	ENSCHIG00000016994	CSTF2	79	85.238	Capra_hircus
ENSXCOG00000016436	cstf2	84	96.970	ENSTSYG00000006529	CSTF2	99	56.014	Carlito_syrichta
ENSXCOG00000016436	cstf2	86	91.549	ENSCPOG00000015255	CSTF2	79	93.750	Cavia_porcellus
ENSXCOG00000016436	cstf2	84	96.970	ENSCCAG00000032975	CSTF2	88	76.829	Cebus_capucinus
ENSXCOG00000016436	cstf2	84	96.970	ENSCATG00000022835	CSTF2	99	57.597	Cercocebus_atys
ENSXCOG00000016436	cstf2	84	96.970	ENSCLAG00000001904	CSTF2	80	91.837	Chinchilla_lanigera
ENSXCOG00000016436	cstf2	84	96.970	ENSCSAG00000010360	CSTF2	99	54.817	Chlorocebus_sabaeus
ENSXCOG00000016436	cstf2	95	92.958	ENSCPBG00000014293	CSTF2	96	61.830	Chrysemys_picta_bellii
ENSXCOG00000016436	cstf2	84	96.970	ENSCANG00000030612	CSTF2	99	57.597	Colobus_angolensis_palliatus
ENSXCOG00000016436	cstf2	83	96.970	ENSCGRG00001023023	Cstf2	99	55.498	Cricetulus_griseus_chok1gshd
ENSXCOG00000016436	cstf2	91	95.455	ENSCGRG00000003897	Cstf2	99	57.295	Cricetulus_griseus_crigri
ENSXCOG00000016436	cstf2	98	98.824	ENSCVAG00000005731	cstf2	96	74.038	Cyprinodon_variegatus
ENSXCOG00000016436	cstf2	90	98.387	ENSDARG00000090788	cstf2	94	100.000	Danio_rerio
ENSXCOG00000016436	cstf2	83	96.970	ENSDORG00000007195	Cstf2	78	93.662	Dipodomys_ordii
ENSXCOG00000016436	cstf2	81	77.551	ENSETEG00000004931	CSTF2	63	77.551	Echinops_telfairi
ENSXCOG00000016436	cstf2	86	91.549	ENSEASG00005001216	CSTF2	86	76.400	Equus_asinus_asinus
ENSXCOG00000016436	cstf2	86	91.549	ENSECAG00000009325	CSTF2	86	76.400	Equus_caballus
ENSXCOG00000016436	cstf2	84	96.970	ENSFCAG00000007000	CSTF2	86	76.707	Felis_catus
ENSXCOG00000016436	cstf2	80	96.296	ENSFALG00000003859	CSTF2	75	92.593	Ficedula_albicollis
ENSXCOG00000016436	cstf2	84	96.970	ENSFDAG00000002416	CSTF2	82	76.829	Fukomys_damarensis
ENSXCOG00000016436	cstf2	100	97.647	ENSFHEG00000017065	cstf2	93	74.046	Fundulus_heteroclitus
ENSXCOG00000016436	cstf2	70	98.507	ENSGMOG00000005145	cstf2	67	98.507	Gadus_morhua
ENSXCOG00000016436	cstf2	94	91.549	ENSGALG00000006760	CSTF2	64	96.970	Gallus_gallus
ENSXCOG00000016436	cstf2	98	98.824	ENSGAFG00000020027	cstf2	96	73.245	Gambusia_affinis
ENSXCOG00000016436	cstf2	95	88.312	ENSGACG00000017326	cstf2	66	98.485	Gasterosteus_aculeatus
ENSXCOG00000016436	cstf2	95	92.958	ENSGAGG00000006037	CSTF2	86	75.494	Gopherus_agassizii
ENSXCOG00000016436	cstf2	84	96.970	ENSGGOG00000022267	CSTF2	88	76.829	Gorilla_gorilla
ENSXCOG00000016436	cstf2	100	94.118	ENSHBUG00000016183	cstf2	72	98.485	Haplochromis_burtoni
ENSXCOG00000016436	cstf2	84	96.970	ENSHGLG00000000659	-	81	90.196	Heterocephalus_glaber_female
ENSXCOG00000016436	cstf2	90	78.205	ENSHGLG00000013455	-	99	44.870	Heterocephalus_glaber_female
ENSXCOG00000016436	cstf2	84	96.970	ENSHGLG00100001130	-	81	90.196	Heterocephalus_glaber_male
ENSXCOG00000016436	cstf2	90	78.205	ENSHGLG00100015391	-	99	45.043	Heterocephalus_glaber_male
ENSXCOG00000016436	cstf2	92	98.507	ENSHCOG00000005157	cstf2	66	98.485	Hippocampus_comes
ENSXCOG00000016436	cstf2	98	87.059	ENSIPUG00000017839	cstf2	66	98.485	Ictalurus_punctatus
ENSXCOG00000016436	cstf2	84	96.970	ENSSTOG00000023445	CSTF2	92	85.119	Ictidomys_tridecemlineatus
ENSXCOG00000016436	cstf2	84	96.970	ENSJJAG00000020507	Cstf2	80	91.837	Jaculus_jaculus
ENSXCOG00000016436	cstf2	75	94.118	ENSKMAG00000001068	cstf2	96	69.905	Kryptolebias_marmoratus
ENSXCOG00000016436	cstf2	73	93.671	ENSLBEG00000028720	cstf2	85	96.610	Labrus_bergylta
ENSXCOG00000016436	cstf2	70	92.958	ENSLACG00000015927	CSTF2	86	78.367	Latimeria_chalumnae
ENSXCOG00000016436	cstf2	94	98.485	ENSLOCG00000015300	cstf2	93	62.271	Lepisosteus_oculatus
ENSXCOG00000016436	cstf2	70	96.970	ENSLAFG00000000474	CSTF2	71	96.970	Loxodonta_africana
ENSXCOG00000016436	cstf2	84	96.970	ENSMFAG00000043888	CSTF2	99	57.597	Macaca_fascicularis
ENSXCOG00000016436	cstf2	84	96.970	ENSMMUG00000013008	CSTF2	99	57.597	Macaca_mulatta
ENSXCOG00000016436	cstf2	84	96.970	ENSMNEG00000041824	CSTF2	99	57.597	Macaca_nemestrina
ENSXCOG00000016436	cstf2	84	96.970	ENSMLEG00000036870	CSTF2	99	57.597	Mandrillus_leucophaeus
ENSXCOG00000016436	cstf2	90	94.545	ENSMAMG00000020364	cstf2	96	70.406	Mastacembelus_armatus
ENSXCOG00000016436	cstf2	100	94.118	ENSMZEG00005007200	cstf2	74	98.485	Maylandia_zebra
ENSXCOG00000016436	cstf2	79	96.296	ENSMGAG00000004139	CSTF2	63	96.296	Meleagris_gallopavo
ENSXCOG00000016436	cstf2	83	96.970	ENSMAUG00000000965	Cstf2	99	55.403	Mesocricetus_auratus
ENSXCOG00000016436	cstf2	83	96.970	ENSMICG00000014121	CSTF2	82	75.610	Microcebus_murinus
ENSXCOG00000016436	cstf2	83	96.970	ENSMOCG00000008081	Cstf2	99	56.545	Microtus_ochrogaster
ENSXCOG00000016436	cstf2	75	95.294	ENSMMOG00000000538	cstf2	96	66.063	Mola_mola
ENSXCOG00000016436	cstf2	81	77.551	ENSMODG00000011785	CSTF2	99	56.757	Monodelphis_domestica
ENSXCOG00000016436	cstf2	83	96.970	MGP_CAROLIEiJ_G0033383	Cstf2	80	92.517	Mus_caroli
ENSXCOG00000016436	cstf2	83	96.970	ENSMUSG00000031256	Cstf2	80	92.517	Mus_musculus
ENSXCOG00000016436	cstf2	83	96.970	MGP_PahariEiJ_G0031923	Cstf2	80	78.189	Mus_pahari
ENSXCOG00000016436	cstf2	83	96.970	MGP_SPRETEiJ_G0034548	Cstf2	80	92.517	Mus_spretus
ENSXCOG00000016436	cstf2	84	96.970	ENSMPUG00000002339	CSTF2	83	76.707	Mustela_putorius_furo
ENSXCOG00000016436	cstf2	63	96.970	ENSMLUG00000004598	CSTF2	61	95.833	Myotis_lucifugus
ENSXCOG00000016436	cstf2	84	96.970	ENSNGAG00000021985	Cstf2	99	57.976	Nannospalax_galili
ENSXCOG00000016436	cstf2	87	96.154	ENSNBRG00000021694	cstf2	77	96.154	Neolamprologus_brichardi
ENSXCOG00000016436	cstf2	84	96.970	ENSNLEG00000007510	CSTF2	88	76.829	Nomascus_leucogenys
ENSXCOG00000016436	cstf2	69	92.958	ENSMEUG00000007875	-	99	58.065	Notamacropus_eugenii
ENSXCOG00000016436	cstf2	87	53.308	ENSMEUG00000014025	-	68	95.238	Notamacropus_eugenii
ENSXCOG00000016436	cstf2	71	92.958	ENSMEUG00000011186	-	99	59.498	Notamacropus_eugenii
ENSXCOG00000016436	cstf2	88	87.805	ENSOPRG00000003106	CSTF2	81	72.637	Ochotona_princeps
ENSXCOG00000016436	cstf2	84	96.970	ENSODEG00000002059	CSTF2	99	54.889	Octodon_degus
ENSXCOG00000016436	cstf2	83	98.611	ENSONIG00000002631	cstf2	85	81.048	Oreochromis_niloticus
ENSXCOG00000016436	cstf2	84	96.970	ENSOCUG00000010468	CSTF2	99	56.326	Oryctolagus_cuniculus
ENSXCOG00000016436	cstf2	96	68.045	ENSORLG00000001380	cstf2	96	69.318	Oryzias_latipes
ENSXCOG00000016436	cstf2	96	68.233	ENSORLG00020021917	cstf2	96	69.129	Oryzias_latipes_hni
ENSXCOG00000016436	cstf2	96	68.233	ENSORLG00015011996	cstf2	96	69.508	Oryzias_latipes_hsok
ENSXCOG00000016436	cstf2	100	89.412	ENSOMEG00000015507	cstf2	96	70.000	Oryzias_melastigma
ENSXCOG00000016436	cstf2	64	96.970	ENSOGAG00000011192	CSTF2	82	76.735	Otolemur_garnettii
ENSXCOG00000016436	cstf2	84	96.970	ENSOARG00000001022	CSTF2	79	85.238	Ovis_aries
ENSXCOG00000016436	cstf2	84	96.970	ENSPPAG00000031804	CSTF2	88	76.829	Pan_paniscus
ENSXCOG00000016436	cstf2	84	96.970	ENSPPRG00000022492	CSTF2	86	76.707	Panthera_pardus
ENSXCOG00000016436	cstf2	84	93.939	ENSPTIG00000009922	CSTF2	86	75.904	Panthera_tigris_altaica
ENSXCOG00000016436	cstf2	84	96.970	ENSPTRG00000022090	CSTF2	88	76.829	Pan_troglodytes
ENSXCOG00000016436	cstf2	84	96.970	ENSPANG00000002303	CSTF2	82	76.829	Papio_anubis
ENSXCOG00000016436	cstf2	98	85.882	ENSPKIG00000005033	cstf2	69	98.485	Paramormyrops_kingsleyae
ENSXCOG00000016436	cstf2	98	94.186	ENSPMGG00000006534	cstf2	67	98.485	Periophthalmus_magnuspinnatus
ENSXCOG00000016436	cstf2	83	96.970	ENSPEMG00000019415	Cstf2	99	55.403	Peromyscus_maniculatus_bairdii
ENSXCOG00000016436	cstf2	81	77.551	ENSPCIG00000002989	CSTF2	55	96.970	Phascolarctos_cinereus
ENSXCOG00000016436	cstf2	94	98.824	ENSPLAG00000011176	cstf2	96	71.691	Poecilia_latipinna
ENSXCOG00000016436	cstf2	94	98.824	ENSPMEG00000017743	cstf2	96	70.956	Poecilia_mexicana
ENSXCOG00000016436	cstf2	94	98.824	ENSPREG00000011481	cstf2	97	69.512	Poecilia_reticulata
ENSXCOG00000016436	cstf2	84	96.970	ENSPPYG00000020541	CSTF2	88	76.829	Pongo_abelii
ENSXCOG00000016436	cstf2	85	91.549	ENSPCOG00000027744	CSTF2	88	76.829	Propithecus_coquereli
ENSXCOG00000016436	cstf2	70	96.000	ENSPVAG00000008342	CSTF2	100	42.882	Pteropus_vampyrus
ENSXCOG00000016436	cstf2	100	94.118	ENSPNYG00000010852	cstf2	94	93.151	Pundamilia_nyererei
ENSXCOG00000016436	cstf2	92	96.970	ENSPNAG00000018887	cstf2	66	96.970	Pygocentrus_nattereri
ENSXCOG00000016436	cstf2	83	96.970	ENSRNOG00000048025	Cstf2	82	78.189	Rattus_norvegicus
ENSXCOG00000016436	cstf2	84	96.970	ENSRBIG00000030745	CSTF2	99	57.016	Rhinopithecus_bieti
ENSXCOG00000016436	cstf2	84	96.970	ENSRROG00000045042	CSTF2	99	57.597	Rhinopithecus_roxellana
ENSXCOG00000016436	cstf2	84	96.970	ENSSBOG00000021649	CSTF2	88	76.829	Saimiri_boliviensis_boliviensis
ENSXCOG00000016436	cstf2	81	77.551	ENSSHAG00000003681	CSTF2	78	60.993	Sarcophilus_harrisii
ENSXCOG00000016436	cstf2	91	98.485	ENSSFOG00015006348	cstf2	68	98.485	Scleropages_formosus
ENSXCOG00000016436	cstf2	98	94.118	ENSSMAG00000013463	cstf2	96	71.023	Scophthalmus_maximus
ENSXCOG00000016436	cstf2	97	54.251	ENSSPUG00000005288	-	99	56.688	Sphenodon_punctatus
ENSXCOG00000016436	cstf2	91	96.970	ENSSSCG00000012486	CSTF2	79	85.238	Sus_scrofa
ENSXCOG00000016436	cstf2	93	91.549	ENSTGUG00000002253	CSTF2	60	96.970	Taeniopygia_guttata
ENSXCOG00000016436	cstf2	93	92.958	ENSTNIG00000016860	cstf2	68	98.485	Tetraodon_nigroviridis
ENSXCOG00000016436	cstf2	52	98.780	ENSTBEG00000010029	-	62	98.780	Tupaia_belangeri
ENSXCOG00000016436	cstf2	84	96.970	ENSTTRG00000013556	CSTF2	99	55.326	Tursiops_truncatus
ENSXCOG00000016436	cstf2	84	96.970	ENSUAMG00000026605	CSTF2	86	76.707	Ursus_americanus
ENSXCOG00000016436	cstf2	91	95.455	ENSUMAG00000012417	CSTF2	85	76.305	Ursus_maritimus
ENSXCOG00000016436	cstf2	53	93.939	ENSVPAG00000006466	CSTF2	60	64.286	Vicugna_pacos
ENSXCOG00000016436	cstf2	84	96.970	ENSVVUG00000004717	CSTF2	99	56.326	Vulpes_vulpes
ENSXCOG00000016436	cstf2	91	96.970	ENSXETG00000009642	cstf2	67	96.970	Xenopus_tropicalis
ENSXCOG00000016436	cstf2	92	98.485	ENSXMAG00000013524	cstf2	97	71.781	Xiphophorus_maculatus