EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000016505 (Gene tree)
Gene ID: -
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 6311 bases
Position: chrKQ557216.1:8424654-8430964
Accession: ZDB-GENE-060825-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000022085	MTS	PF05175.14	2e-05	1	1
ENSXCOP00000022089	MTS	PF05175.14	2.1e-05	1	1
ENSXCOP00000022085	Met_10	PF02475.16	6.1e-31	1	1
ENSXCOP00000022089	Met_10	PF02475.16	7.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000022354	-	1140	-	ENSXCOP00000022085	379 (aa)	-	-
ENSXCOT00000022358	-	1212	-	ENSXCOP00000022089	403 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016505's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016505	trmt12	99	46.824	ENSG00000183665	TRMT12	92	49.760	Homo_sapiens
ENSXCOG00000016505	trmt12	100	73.515	ENSAPOG00000011979	trmt12	100	73.515	Acanthochromis_polyacanthus
ENSXCOG00000016505	trmt12	99	48.227	ENSAMEG00000019612	TRMT12	92	50.478	Ailuropoda_melanoleuca
ENSXCOG00000016505	trmt12	95	74.740	ENSACIG00000012982	trmt12	99	74.740	Amphilophus_citrinellus
ENSXCOG00000016505	trmt12	100	73.762	ENSAOCG00000020570	trmt12	99	74.935	Amphiprion_ocellaris
ENSXCOG00000016505	trmt12	100	73.515	ENSAPEG00000006335	trmt12	99	74.674	Amphiprion_percula
ENSXCOG00000016505	trmt12	100	72.236	ENSATEG00000018316	trmt12	100	72.236	Anabas_testudineus
ENSXCOG00000016505	trmt12	100	73.086	ENSACLG00000001008	trmt12	100	73.086	Astatotilapia_calliptera
ENSXCOG00000016505	trmt12	99	56.028	ENSAMXG00000040366	trmt12	99	56.028	Astyanax_mexicanus
ENSXCOG00000016505	trmt12	99	47.653	ENSBTAG00000020398	TRMT12	89	49.880	Bos_taurus
ENSXCOG00000016505	trmt12	99	45.667	ENSCJAG00000022174	TRMT12	92	48.325	Callithrix_jacchus
ENSXCOG00000016505	trmt12	99	47.073	ENSCAFG00000001040	TRMT12	94	49.880	Canis_familiaris
ENSXCOG00000016505	trmt12	99	47.073	ENSCAFG00020006500	TRMT12	94	49.880	Canis_lupus_dingo
ENSXCOG00000016505	trmt12	99	47.887	ENSCHIG00000016574	TRMT12	96	47.887	Capra_hircus
ENSXCOG00000016505	trmt12	97	49.879	ENSCPOG00000026520	TRMT12	93	49.879	Cavia_porcellus
ENSXCOG00000016505	trmt12	99	46.824	ENSCSAG00000018615	TRMT12	92	49.398	Chlorocebus_sabaeus
ENSXCOG00000016505	trmt12	97	50.351	ENSCPBG00000014290	TRMT12	93	50.351	Chrysemys_picta_bellii
ENSXCOG00000016505	trmt12	75	47.603	ENSCING00000019633	-	97	47.603	Ciona_intestinalis
ENSXCOG00000016505	trmt12	77	46.939	ENSCSAVG00000000415	-	91	46.939	Ciona_savignyi
ENSXCOG00000016505	trmt12	97	47.174	ENSCGRG00001014834	Trmt12	95	47.912	Cricetulus_griseus_chok1gshd
ENSXCOG00000016505	trmt12	99	65.122	ENSCSEG00000002675	trmt12	95	65.122	Cynoglossus_semilaevis
ENSXCOG00000016505	trmt12	100	77.916	ENSCVAG00000005590	trmt12	100	77.916	Cyprinodon_variegatus
ENSXCOG00000016505	trmt12	99	56.341	ENSDARG00000060338	trmt12	99	56.341	Danio_rerio
ENSXCOG00000016505	trmt12	96	48.077	ENSETEG00000009373	TRMT12	92	48.077	Echinops_telfairi
ENSXCOG00000016505	trmt12	96	50.718	ENSEASG00005022441	TRMT12	94	50.718	Equus_asinus_asinus
ENSXCOG00000016505	trmt12	97	48.317	ENSEEUG00000004844	TRMT12	93	48.317	Erinaceus_europaeus
ENSXCOG00000016505	trmt12	99	61.707	ENSELUG00000004240	trmt12	99	62.500	Esox_lucius
ENSXCOG00000016505	trmt12	69	54.737	ENSFALG00000003825	TRMT12	93	62.927	Ficedula_albicollis
ENSXCOG00000016505	trmt12	96	49.279	ENSFDAG00000016647	TRMT12	94	49.279	Fukomys_damarensis
ENSXCOG00000016505	trmt12	94	69.921	ENSFHEG00000017338	trmt12	97	69.921	Fundulus_heteroclitus
ENSXCOG00000016505	trmt12	84	56.725	ENSGALG00000006773	TRMT12	76	56.322	Gallus_gallus
ENSXCOG00000016505	trmt12	100	93.564	ENSGAFG00000020056	trmt12	100	93.564	Gambusia_affinis
ENSXCOG00000016505	trmt12	96	68.475	ENSGACG00000017351	trmt12	100	68.475	Gasterosteus_aculeatus
ENSXCOG00000016505	trmt12	97	51.294	ENSGAGG00000006032	TRMT12	95	51.294	Gopherus_agassizii
ENSXCOG00000016505	trmt12	100	73.086	ENSHBUG00000016412	trmt12	100	73.086	Haplochromis_burtoni
ENSXCOG00000016505	trmt12	96	49.038	ENSHGLG00000020498	TRMT12	94	49.038	Heterocephalus_glaber_female
ENSXCOG00000016505	trmt12	96	49.038	ENSHGLG00100020132	TRMT12	94	49.038	Heterocephalus_glaber_male
ENSXCOG00000016505	trmt12	100	64.851	ENSHCOG00000005050	trmt12	94	70.859	Hippocampus_comes
ENSXCOG00000016505	trmt12	99	55.231	ENSIPUG00000018011	trmt12	92	55.231	Ictalurus_punctatus
ENSXCOG00000016505	trmt12	99	47.156	ENSSTOG00000030617	TRMT12	94	48.681	Ictidomys_tridecemlineatus
ENSXCOG00000016505	trmt12	99	73.267	ENSKMAG00000000891	trmt12	99	73.267	Kryptolebias_marmoratus
ENSXCOG00000016505	trmt12	56	72.936	ENSLBEG00000017456	-	89	72.936	Labrus_bergylta
ENSXCOG00000016505	trmt12	100	64.234	ENSLBEG00000028712	trmt12	100	64.234	Labrus_bergylta
ENSXCOG00000016505	trmt12	97	51.185	ENSLACG00000015869	TRMT12	94	51.185	Latimeria_chalumnae
ENSXCOG00000016505	trmt12	99	55.746	ENSLOCG00000015290	trmt12	99	55.746	Lepisosteus_oculatus
ENSXCOG00000016505	trmt12	99	48.585	ENSLAFG00000012519	TRMT12	96	48.585	Loxodonta_africana
ENSXCOG00000016505	trmt12	99	46.588	ENSMMUG00000015490	TRMT12	93	49.157	Macaca_mulatta
ENSXCOG00000016505	trmt12	99	70.270	ENSMAMG00000020311	trmt12	99	70.270	Mastacembelus_armatus
ENSXCOG00000016505	trmt12	100	73.333	ENSMZEG00005007349	trmt12	100	73.333	Maylandia_zebra
ENSXCOG00000016505	trmt12	99	51.537	ENSMGAG00000004174	TRMT12	95	51.537	Meleagris_gallopavo
ENSXCOG00000016505	trmt12	99	70.197	ENSMMOG00000000412	trmt12	99	70.197	Mola_mola
ENSXCOG00000016505	trmt12	99	48.184	ENSMODG00000021403	-	92	50.495	Monodelphis_domestica
ENSXCOG00000016505	trmt12	97	48.529	ENSMODG00000011798	-	84	48.529	Monodelphis_domestica
ENSXCOG00000016505	trmt12	100	72.616	ENSMALG00000008668	trmt12	100	72.616	Monopterus_albus
ENSXCOG00000016505	trmt12	97	48.558	MGP_CAROLIEiJ_G0019820	Trmt12	93	48.558	Mus_caroli
ENSXCOG00000016505	trmt12	99	46.462	ENSMUSG00000037085	Trmt12	95	46.462	Mus_musculus
ENSXCOG00000016505	trmt12	99	47.170	MGP_PahariEiJ_G0019829	Trmt12	93	49.758	Mus_pahari
ENSXCOG00000016505	trmt12	99	46.462	MGP_SPRETEiJ_G0020717	Trmt12	95	46.462	Mus_spretus
ENSXCOG00000016505	trmt12	99	47.307	ENSMPUG00000019150	TRMT12	93	50.000	Mustela_putorius_furo
ENSXCOG00000016505	trmt12	99	47.541	ENSMLUG00000003753	TRMT12	94	49.640	Myotis_lucifugus
ENSXCOG00000016505	trmt12	97	48.201	ENSNGAG00000014548	Trmt12	95	48.201	Nannospalax_galili
ENSXCOG00000016505	trmt12	100	73.515	ENSNBRG00000021510	trmt12	100	73.515	Neolamprologus_brichardi
ENSXCOG00000016505	trmt12	99	44.181	ENSOPRG00000008067	TRMT12	92	45.783	Ochotona_princeps
ENSXCOG00000016505	trmt12	99	46.824	ENSODEG00000018933	TRMT12	94	49.157	Octodon_degus
ENSXCOG00000016505	trmt12	100	73.515	ENSONIG00000002614	trmt12	100	73.515	Oreochromis_niloticus
ENSXCOG00000016505	trmt12	96	45.610	ENSOANG00000009987	TRMT12	95	45.610	Ornithorhynchus_anatinus
ENSXCOG00000016505	trmt12	81	54.683	ENSOCUG00000026379	TRMT12	73	54.683	Oryctolagus_cuniculus
ENSXCOG00000016505	trmt12	100	68.486	ENSORLG00000001280	trmt12	100	69.975	Oryzias_latipes
ENSXCOG00000016505	trmt12	100	68.238	ENSORLG00020000708	trmt12	100	69.727	Oryzias_latipes_hni
ENSXCOG00000016505	trmt12	100	69.975	ENSORLG00015012344	trmt12	100	69.975	Oryzias_latipes_hsok
ENSXCOG00000016505	trmt12	100	68.486	ENSOMEG00000015267	trmt12	98	68.486	Oryzias_melastigma
ENSXCOG00000016505	trmt12	97	49.282	ENSOGAG00000015845	TRMT12	94	49.282	Otolemur_garnettii
ENSXCOG00000016505	trmt12	99	57.635	ENSPKIG00000004640	trmt12	99	57.653	Paramormyrops_kingsleyae
ENSXCOG00000016505	trmt12	62	57.778	ENSPSIG00000003476	TRMT12	99	57.778	Pelodiscus_sinensis
ENSXCOG00000016505	trmt12	99	61.823	ENSPMGG00000016356	trmt12	97	61.823	Periophthalmus_magnuspinnatus
ENSXCOG00000016505	trmt12	99	48.184	ENSPCIG00000002967	TRMT12	87	48.184	Phascolarctos_cinereus
ENSXCOG00000016505	trmt12	96	90.933	ENSPFOG00000016931	trmt12	94	90.933	Poecilia_formosa
ENSXCOG00000016505	trmt12	100	90.074	ENSPLAG00000020621	trmt12	100	90.074	Poecilia_latipinna
ENSXCOG00000016505	trmt12	100	92.556	ENSPMEG00000000818	trmt12	100	92.556	Poecilia_mexicana
ENSXCOG00000016505	trmt12	100	90.074	ENSPREG00000011621	trmt12	100	90.074	Poecilia_reticulata
ENSXCOG00000016505	trmt12	99	46.824	ENSPPYG00000018866	TRMT12	92	49.519	Pongo_abelii
ENSXCOG00000016505	trmt12	97	48.681	ENSPCAG00000000556	TRMT12	93	48.681	Procavia_capensis
ENSXCOG00000016505	trmt12	99	46.353	ENSPVAG00000009149	TRMT12	93	49.279	Pteropus_vampyrus
ENSXCOG00000016505	trmt12	95	72.656	ENSPNYG00000010696	trmt12	99	72.656	Pundamilia_nyererei
ENSXCOG00000016505	trmt12	99	54.048	ENSPNAG00000019028	trmt12	99	54.048	Pygocentrus_nattereri
ENSXCOG00000016505	trmt12	97	49.519	ENSRNOG00000008978	Trmt12	95	49.519	Rattus_norvegicus
ENSXCOG00000016505	trmt12	99	47.816	ENSSHAG00000003345	TRMT12	94	47.816	Sarcophilus_harrisii
ENSXCOG00000016505	trmt12	99	53.938	ENSSFOG00015006090	trmt12	99	53.938	Scleropages_formosus
ENSXCOG00000016505	trmt12	57	30.222	ENSSFOG00015013093	trmt5	50	30.769	Scleropages_formosus
ENSXCOG00000016505	trmt12	99	73.645	ENSSMAG00000013247	trmt12	99	73.645	Scophthalmus_maximus
ENSXCOG00000016505	trmt12	100	73.710	ENSSDUG00000006168	trmt12	100	73.710	Seriola_dumerili
ENSXCOG00000016505	trmt12	100	73.710	ENSSLDG00000025007	trmt12	100	73.710	Seriola_lalandi_dorsalis
ENSXCOG00000016505	trmt12	97	50.708	ENSSPUG00000005321	TRMT12	93	50.708	Sphenodon_punctatus
ENSXCOG00000016505	trmt12	100	74.815	ENSSPAG00000009435	trmt12	97	74.815	Stegastes_partitus
ENSXCOG00000016505	trmt12	99	47.518	ENSTGUG00000002280	TRMT12	99	49.282	Taeniopygia_guttata
ENSXCOG00000016505	trmt12	99	65.686	ENSTRUG00000011548	trmt12	99	65.686	Takifugu_rubripes
ENSXCOG00000016505	trmt12	99	64.039	ENSTNIG00000016866	trmt12	99	64.039	Tetraodon_nigroviridis
ENSXCOG00000016505	trmt12	99	46.838	ENSUAMG00000002067	TRMT12	95	49.761	Ursus_americanus
ENSXCOG00000016505	trmt12	99	46.370	ENSVPAG00000006519	TRMT12	93	49.282	Vicugna_pacos
ENSXCOG00000016505	trmt12	96	49.522	ENSVVUG00000016790	TRMT12	93	49.522	Vulpes_vulpes
ENSXCOG00000016505	trmt12	99	50.374	ENSXETG00000009641	trmt12	95	50.374	Xenopus_tropicalis
ENSXCOG00000016505	trmt12	100	98.015	ENSXMAG00000025318	trmt12	100	98.015	Xiphophorus_maculatus