EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000016589 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 1461 bases
Position: chrKQ557221.1:29786482-29787942
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000022207	zf-C2H2	PF00096.26	1.2e-10	1	2
ENSXCOP00000022207	zf-C2H2	PF00096.26	1.2e-10	2	2
ENSXCOP00000022207	zf-met	PF12874.7	1.4e-07	1	2
ENSXCOP00000022207	zf-met	PF12874.7	1.4e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000022476	-	172	-	ENSXCOP00000022207	57 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000016589	-	100	56.604	ENSXCOG00000016307	-	78	56.604
ENSXCOG00000016589	-	98	46.429	ENSXCOG00000009772	-	56	46.429
ENSXCOG00000016589	-	98	46.429	ENSXCOG00000009674	-	73	46.429
ENSXCOG00000016589	-	98	54.545	ENSXCOG00000015312	-	78	54.545
ENSXCOG00000016589	-	91	51.923	ENSXCOG00000007420	-	87	51.923
ENSXCOG00000016589	-	95	59.259	ENSXCOG00000007994	-	74	59.259
ENSXCOG00000016589	-	96	44.186	ENSXCOG00000011372	-	64	44.186
ENSXCOG00000016589	-	100	51.923	ENSXCOG00000007957	-	66	52.830
ENSXCOG00000016589	-	98	54.386	ENSXCOG00000015441	-	67	54.386
ENSXCOG00000016589	-	100	50.877	ENSXCOG00000007414	-	58	50.877
ENSXCOG00000016589	-	96	51.351	ENSXCOG00000008062	-	93	44.444
ENSXCOG00000016589	-	95	66.667	ENSXCOG00000006553	-	81	66.667
ENSXCOG00000016589	-	100	57.407	ENSXCOG00000007529	-	92	57.407
ENSXCOG00000016589	-	96	55.769	ENSXCOG00000000528	-	77	55.769
ENSXCOG00000016589	-	96	56.604	ENSXCOG00000006614	-	83	56.604
ENSXCOG00000016589	-	98	54.762	ENSXCOG00000019484	-	63	54.762
ENSXCOG00000016589	-	96	47.273	ENSXCOG00000009186	-	82	47.273
ENSXCOG00000016589	-	96	54.717	ENSXCOG00000009665	-	68	54.545
ENSXCOG00000016589	-	100	52.727	ENSXCOG00000002857	-	93	52.727
ENSXCOG00000016589	-	100	55.556	ENSXCOG00000016567	-	71	55.556
ENSXCOG00000016589	-	96	51.613	ENSXCOG00000003472	-	74	50.000
ENSXCOG00000016589	-	100	51.852	ENSXCOG00000007981	-	80	51.852
ENSXCOG00000016589	-	100	51.852	ENSXCOG00000001116	-	85	51.852
ENSXCOG00000016589	-	93	63.333	ENSXCOG00000015435	-	54	63.333
ENSXCOG00000016589	-	98	55.769	ENSXCOG00000003451	-	78	55.769
ENSXCOG00000016589	-	98	52.083	ENSXCOG00000008116	-	52	50.000
ENSXCOG00000016589	-	98	48.936	ENSXCOG00000009668	-	63	48.936
ENSXCOG00000016589	-	96	63.889	ENSXCOG00000002898	-	81	62.162
ENSXCOG00000016589	-	98	50.909	ENSXCOG00000019382	-	54	50.909
ENSXCOG00000016589	-	98	57.407	ENSXCOG00000016117	-	95	57.407
ENSXCOG00000016589	-	93	49.057	ENSXCOG00000010950	si:dkey-210j14.3	50	49.057
ENSXCOG00000016589	-	95	68.966	ENSXCOG00000012924	-	88	68.966
ENSXCOG00000016589	-	98	55.556	ENSXCOG00000009003	-	83	55.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016589	-	98	52.830	ENSEBUG00000010204	-	54	52.830	Eptatretus_burgeri
ENSXCOG00000016589	-	100	52.632	ENSLOCG00000018285	-	100	52.632	Lepisosteus_oculatus
ENSXCOG00000016589	-	93	49.057	ENSMMOG00000011435	-	63	49.057	Mola_mola
ENSXCOG00000016589	-	100	68.293	ENSORLG00000028457	-	66	68.293	Oryzias_latipes
ENSXCOG00000016589	-	100	61.818	ENSPREG00000003532	-	100	61.818	Poecilia_reticulata
ENSXCOG00000016589	-	96	59.375	ENSPNYG00000006306	-	85	59.375	Pundamilia_nyererei