EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000016680 (Gene tree)
Gene ID: -
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G patch domain containing 8
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 22981 bases
Position: chrKQ557208.1:17772410-17795390
Accession: ZDB-GENE-030131-6966
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000022331	zf-C2H2_jaz	PF12171.8	4.5e-06	1	1
ENSXCOP00000022331	G-patch	PF01585.23	6.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000022604	-	4473	-	ENSXCOP00000022331	1490 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016680	gpatch8	100	83.267	ENSAPOG00000023938	gpatch8	100	83.667	Acanthochromis_polyacanthus
ENSXCOG00000016680	gpatch8	100	82.423	ENSACIG00000012241	gpatch8	100	82.823	Amphilophus_citrinellus
ENSXCOG00000016680	gpatch8	100	82.933	ENSAOCG00000018102	gpatch8	100	83.467	Amphiprion_ocellaris
ENSXCOG00000016680	gpatch8	100	82.867	ENSAPEG00000016776	gpatch8	100	83.400	Amphiprion_percula
ENSXCOG00000016680	gpatch8	100	80.546	ENSATEG00000003247	gpatch8	100	80.680	Anabas_testudineus
ENSXCOG00000016680	gpatch8	100	81.467	ENSACLG00000004165	gpatch8	100	81.800	Astatotilapia_calliptera
ENSXCOG00000016680	gpatch8	100	77.674	ENSCSEG00000021277	gpatch8	100	77.807	Cynoglossus_semilaevis
ENSXCOG00000016680	gpatch8	100	87.275	ENSCVAG00000013477	gpatch8	100	88.075	Cyprinodon_variegatus
ENSXCOG00000016680	gpatch8	100	63.114	ENSDARG00000059768	gpatch8	55	60.441	Danio_rerio
ENSXCOG00000016680	gpatch8	59	49.474	ENSEBUG00000005749	gpatch8	54	46.970	Eptatretus_burgeri
ENSXCOG00000016680	gpatch8	61	62.913	ENSELUG00000019920	gpatch8	56	62.743	Esox_lucius
ENSXCOG00000016680	gpatch8	56	80.502	ENSFHEG00000005791	gpatch8	55	80.552	Fundulus_heteroclitus
ENSXCOG00000016680	gpatch8	100	96.450	ENSGAFG00000018138	gpatch8	100	96.450	Gambusia_affinis
ENSXCOG00000016680	gpatch8	100	81.304	ENSHBUG00000002669	gpatch8	100	81.770	Haplochromis_burtoni
ENSXCOG00000016680	gpatch8	74	56.672	ENSHGLG00100010738	GPATCH8	64	62.810	Heterocephalus_glaber_male
ENSXCOG00000016680	gpatch8	100	72.588	ENSHCOG00000017518	gpatch8	100	71.923	Hippocampus_comes
ENSXCOG00000016680	gpatch8	100	83.200	ENSKMAG00000018364	gpatch8	55	79.592	Kryptolebias_marmoratus
ENSXCOG00000016680	gpatch8	100	78.856	ENSLBEG00000023352	gpatch8	100	78.923	Labrus_bergylta
ENSXCOG00000016680	gpatch8	61	81.034	ENSLOCG00000012265	gpatch8	72	75.177	Lepisosteus_oculatus
ENSXCOG00000016680	gpatch8	100	80.414	ENSMAMG00000001618	gpatch8	100	81.197	Mastacembelus_armatus
ENSXCOG00000016680	gpatch8	100	81.400	ENSMZEG00005022584	gpatch8	100	81.733	Maylandia_zebra
ENSXCOG00000016680	gpatch8	61	76.247	ENSMMOG00000020472	gpatch8	55	74.702	Mola_mola
ENSXCOG00000016680	gpatch8	50	63.584	ENSMLUG00000013840	GPATCH8	52	64.497	Myotis_lucifugus
ENSXCOG00000016680	gpatch8	100	81.504	ENSNBRG00000016402	gpatch8	100	81.969	Neolamprologus_brichardi
ENSXCOG00000016680	gpatch8	100	79.200	ENSONIG00000001292	gpatch8	100	81.273	Oreochromis_niloticus
ENSXCOG00000016680	gpatch8	61	75.433	ENSORLG00020006656	gpatch8	56	73.508	Oryzias_latipes_hni
ENSXCOG00000016680	gpatch8	61	76.082	ENSORLG00015019797	gpatch8	56	74.105	Oryzias_latipes_hsok
ENSXCOG00000016680	gpatch8	56	73.810	ENSOMEG00000023809	gpatch8	55	73.981	Oryzias_melastigma
ENSXCOG00000016680	gpatch8	56	55.201	ENSPKIG00000004860	GPATCH8	52	56.667	Paramormyrops_kingsleyae
ENSXCOG00000016680	gpatch8	61	52.548	ENSPKIG00000018753	gpatch8	56	54.790	Paramormyrops_kingsleyae
ENSXCOG00000016680	gpatch8	100	96.651	ENSPFOG00000014833	gpatch8	100	96.651	Poecilia_formosa
ENSXCOG00000016680	gpatch8	100	96.651	ENSPLAG00000001035	gpatch8	100	96.651	Poecilia_latipinna
ENSXCOG00000016680	gpatch8	100	96.450	ENSPMEG00000024032	gpatch8	100	96.450	Poecilia_mexicana
ENSXCOG00000016680	gpatch8	100	95.378	ENSPREG00000008911	gpatch8	100	95.244	Poecilia_reticulata
ENSXCOG00000016680	gpatch8	100	81.600	ENSPNYG00000009426	gpatch8	100	81.933	Pundamilia_nyererei
ENSXCOG00000016680	gpatch8	59	60.665	ENSPNAG00000016200	gpatch8	58	61.460	Pygocentrus_nattereri
ENSXCOG00000016680	gpatch8	56	56.993	ENSSFOG00015004299	GPATCH8	55	56.577	Scleropages_formosus
ENSXCOG00000016680	gpatch8	55	55.713	ENSSFOG00015021377	-	55	55.896	Scleropages_formosus
ENSXCOG00000016680	gpatch8	96	81.931	ENSSDUG00000018065	gpatch8	99	81.793	Seriola_dumerili
ENSXCOG00000016680	gpatch8	100	82.903	ENSSLDG00000009225	gpatch8	100	82.903	Seriola_lalandi_dorsalis
ENSXCOG00000016680	gpatch8	100	83.133	ENSSPAG00000011368	gpatch8	100	83.400	Stegastes_partitus
ENSXCOG00000016680	gpatch8	100	75.899	ENSTRUG00000020474	gpatch8	100	75.616	Takifugu_rubripes
ENSXCOG00000016680	gpatch8	58	62.500	ENSTBEG00000009486	GPATCH8	56	62.132	Tupaia_belangeri
ENSXCOG00000016680	gpatch8	72	52.326	ENSTTRG00000010527	GPATCH8	71	51.163	Tursiops_truncatus
ENSXCOG00000016680	gpatch8	58	56.585	ENSVPAG00000006937	GPATCH8	67	57.072	Vicugna_pacos
ENSXCOG00000016680	gpatch8	100	99.196	ENSXMAG00000009217	gpatch8	100	99.362	Xiphophorus_maculatus